FFCP PHASE1:Hg19::chr19:33210645..33210706,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=91646|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25044|TSSclassifier=S|UniProt=E9PAY0,Q587J7|association_with_transcript=0bp_to_ENST00000421545,ENST00000444215,NM_001110822,uc002ntq.2,uc002ntr.3_5end|description=CAGE_peak_1_at_TDRD12_5end|id=chr19:33210645..33210706,+|ontology_enrichment_celltype=CL:0002322!4.86e-09!5|ontology_enrichment_celltype_v019=CL:0002322;2.31e-25;5!CL:0000039;2.67e-11;7!CL:0000586;2.67e-11;7!CL:0002032;3.67e-09;1!CL:0000557;3.67e-09;1!CL:0002321;1.34e-08;15!CL:0002077;4.62e-08;34!CL:0000148;1.37e-07;10!CL:0000312;1.98e-07;5|ontology_enrichment_celltype_v019_2=CL:0002322,1.74e-25,5;CL:0000039,2.67e-11,7;CL:0000586,2.67e-11,7;CL:0002077,6.36e-08,34;CL:0000148,1.24e-07,10;CL:0000541,1.24e-07,10;CL:0000312,2.14e-07,5|ontology_enrichment_development_v019=UBERON:0009117;1.26e-20;10!UBERON:0005564;1.26e-20;10!UBERON:0010115;3.67e-09;1!UBERON:0006603;8.73e-09;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;1.55e-09;1!DOID:0070004;1.55e-09;1|ontology_enrichment_disease_v019_2=DOID:4960,1.56e-09,1;DOID:0070004,1.56e-09,1|ontology_enrichment_uberon=UBERON:0007023!6.33e-14!115;UBERON:0000473!6.04e-10!8;UBERON:0003135!9.58e-09!11;UBERON:0001049!1.89e-07!57;UBERON:0005068!1.89e-07!57;UBERON:0006241!1.89e-07!57;UBERON:0007135!1.89e-07!57;UBERON:0003075!3.05e-07!86;UBERON:0007284!3.05e-07!86|ontology_enrichment_uberon_v019=UBERON:0000473;8.39e-26;8!UBERON:0003135;9.66e-19;11!UBERON:0000991;9.75e-10;21!UBERON:0003101;2.76e-09;22!UBERON:0000079;2.76e-09;22!UBERON:0002363;3.67e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.41e-26,8;UBERON:0003135,9.67e-19,11;UBERON:0000991,9.75e-10,21;UBERON:0009196,9.75e-10,21;UBERON:0009117,9.75e-10,21;UBERON:0005564,9.75e-10,21;UBERON:0004176,2.76e-09,22;UBERON:0003101,2.76e-09,22;UBERON:0000079,2.76e-09,22;UBERON:0002363,3.53e-09,1;UBERON:0007645,3.53e-09,1;UBERON:0007647,3.53e-09,1;UBERON:0010115,3.53e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.127986611154418,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0.486634870302636,1.13441780596881,0,0,7.66227591661619,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.747243402759005,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,2.92736894711029,0.927708378250397,1.85910308591229,1.34759371519982,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0.1466765716419,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.535286966391485,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.368323955743585,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.45169652366,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0,0,0,0.538651809526579,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,1.26373159256976,0,0,0,0,0,0,16.507353669728,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0.551639951094387,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,1.08803560673895,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.2483856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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=91646 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25044 | |||
|TSSclassifier=S | |||
|UniProt=E9PAY0,Q587J7 | |||
|association_with_transcript=0bp_to_ENST00000421545,ENST00000444215,NM_001110822,uc002ntq.2,uc002ntr.3_5end | |||
|description=CAGE_peak_1_at_TDRD12_5end | |||
|id=chr19:33210645..33210706,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.86e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.31e-25;5!CL:0000039;2.67e-11;7!CL:0000586;2.67e-11;7!CL:0002032;3.67e-09;1!CL:0000557;3.67e-09;1!CL:0002321;1.34e-08;15!CL:0002077;4.62e-08;34!CL:0000148;1.37e-07;10!CL:0000312;1.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.74e-25,5;CL:0000039,2.67e-11,7;CL:0000586,2.67e-11,7;CL:0002077,6.36e-08,34;CL:0000148,1.24e-07,10;CL:0000541,1.24e-07,10;CL:0000312,2.14e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.26e-20;10!UBERON:0005564;1.26e-20;10!UBERON:0010115;3.67e-09;1!UBERON:0006603;8.73e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.55e-09;1!DOID:0070004;1.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.56e-09,1;DOID:0070004,1.56e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.33e-14!115;UBERON:0000473!6.04e-10!8;UBERON:0003135!9.58e-09!11;UBERON:0001049!1.89e-07!57;UBERON:0005068!1.89e-07!57;UBERON:0006241!1.89e-07!57;UBERON:0007135!1.89e-07!57;UBERON:0003075!3.05e-07!86;UBERON:0007284!3.05e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.39e-26;8!UBERON:0003135;9.66e-19;11!UBERON:0000991;9.75e-10;21!UBERON:0003101;2.76e-09;22!UBERON:0000079;2.76e-09;22!UBERON:0002363;3.67e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.41e-26,8;UBERON:0003135,9.67e-19,11;UBERON:0000991,9.75e-10,21;UBERON:0009196,9.75e-10,21;UBERON:0009117,9.75e-10,21;UBERON:0005564,9.75e-10,21;UBERON:0004176,2.76e-09,22;UBERON:0003101,2.76e-09,22;UBERON:0000079,2.76e-09,22;UBERON:0002363,3.53e-09,1;UBERON:0007645,3.53e-09,1;UBERON:0007647,3.53e-09,1;UBERON:0010115,3.53e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.127986611154418,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0.486634870302636,1.13441780596881,0,0,7.66227591661619,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.747243402759005,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,2.92736894711029,0.927708378250397,1.85910308591229,1.34759371519982,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0.1466765716419,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.535286966391485,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.368323955743585,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.45169652366,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0,0,0,0.538651809526579,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,1.26373159256976,0,0,0,0,0,0,16.507353669728,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0.551639951094387,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,1.08803560673895,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,62.171121274044,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.776314784381297,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,13.088338454222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65613693383001,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0.546974809018219,0,0,0,0,0,1.00885116665647,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0.563903507879121,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0.203977659483963,43.0220022477552,17.7357156102251,19.3044805255129,9.69967337193464,28.1362336663987,0,0,0,0,0.322944549180031,0.31037357147929,0,0.572824424503484,0.404234377916439,0,0.342233301085281,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,16.7057248680552,0 | |||
|short_description=p1@TDRD12 | |||
}} |
Revision as of 19:57, 11 September 2013
Short description: | p1@TDRD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TDRD12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421545, ENST00000444215, NM_001110822, uc002ntq.2, uc002ntr.3_5end |
EntrezGene: | TDRD12 |
HGNC: | 25044 |
UniProt: | E9PAY0Q587J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.74e-25 | 5 |
germ line cell | 2.67e-11 | 7 |
germ cell | 2.67e-11 | 7 |
ecto-epithelial cell | 6.36e-08 | 34 |
melanocyte | 1.24e-07 | 10 |
melanoblast | 1.24e-07 | 10 |
keratinocyte | 2.14e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 8.41e-26 | 8 |
male reproductive organ | 9.67e-19 | 11 |
gonad | 9.75e-10 | 21 |
indifferent external genitalia | 9.75e-10 | 21 |
indifferent gonad | 9.75e-10 | 21 |
gonad primordium | 9.75e-10 | 21 |
external genitalia | 2.76e-09 | 22 |
male organism | 2.76e-09 | 22 |
male reproductive system | 2.76e-09 | 22 |
dura mater | 3.53e-09 | 1 |
future meninx | 3.53e-09 | 1 |
ectomeninx | 3.53e-09 | 1 |
future dura mater | 3.53e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.56e-09 | 1 |
myeloma | 1.56e-09 | 1 |
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