FFCP PHASE1:Hg19::chr2:211342345..211342356,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1373|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2323|TSSclassifier=S|UniProt=C9JTA4,P31327,Q59HF8,Q6PEK7|association_with_transcript=-49bp_to_ENST00000417946,ENST00000518043,NM_001122633_5end|description=CAGE_peak_5_at_CPS1_5end|id=chr2:211342345..211342356,+|ontology_enrichment_celltype=CL:0000055!2.46e-10!180|ontology_enrichment_celltype_v019=CL:0002549;4.00e-07;2!CL:0002561;4.00e-07;2!CL:1000306;7.85e-07;4!CL:0002547;7.85e-07;4|ontology_enrichment_celltype_v019_2=CL:0002561,3.93e-07,2;CL:0002549,4.17e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!3.46e-07!365;UBERON:0002199!5.97e-07!45;UBERON:0002416!5.97e-07!45|ontology_enrichment_uberon_v019=UBERON:0001003;4.35e-08;15!UBERON:0007376;4.35e-08;15!UBERON:0005629;4.00e-07;2!UBERON:0005358;4.00e-07;2!UBERON:0005933;4.00e-07;2!UBERON:0001886;4.00e-07;2!UBERON:0005942;4.00e-07;2!UBERON:0004086;4.00e-07;2!UBERON:0005282;4.00e-07;2!UBERON:0005281;4.00e-07;2!UBERON:0005932;4.00e-07;2!UBERON:0004797;7.85e-07;4!UBERON:0000415;7.85e-07;4!UBERON:0007240;7.85e-07;4!UBERON:0005742;7.85e-07;4!UBERON:0005734;7.85e-07;4!UBERON:0004664;7.85e-07;4!UBERON:0004663;7.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.72e-08,41;UBERON:0001003,2.52e-08,15;UBERON:0007376,2.52e-08,15;UBERON:0007383,2.52e-08,15;UBERON:0002199,2.94e-07,46;UBERON:0002416,2.94e-07,46;UBERON:0005933,3.93e-07,2;UBERON:0005942,3.93e-07,2;UBERON:0005932,3.93e-07,2;UBERON:0005629,4.17e-07,2;UBERON:0005358,4.17e-07,2;UBERON:0001886,4.17e-07,2;UBERON:0004086,4.17e-07,2;UBERON:0005282,4.17e-07,2;UBERON:0005281,4.17e-07,2|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0,1.48519623552056,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0.739508020333575,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.511450247374121,1.0843174571537,2.00535164254356,0.434539556882471,0.795285947051099,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.45650098894541,2.0078563452417,1.06400514659507,0,0,0,0.933633106199299,0,0.653847612453835,2.11900398702904,2.30470369792,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0,0,2.04154171254893,0.61417158655884,1.65321249881225,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.375355559615893,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0.89694817844431,0,1.27159140695737,0.600182192168805,0.515262646192195,1.28820270022815,0.744467425326359,2.02531598689519,0.779496041289589,1.26216887122057,0.736399189138395,1.45481451136931,0.710019185033229,0.403008392910561,0,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.232387885739037,0.725627385107593,0,1.45990943630332,0,0,1.38134921352481,2.3218396401599,2.16563844500876,0.828147600278907,0.168584690078102,0.241011029883482,1.10293972732394,0.653638332277218,0,0.404493924480493,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0,0,0,0.171567810298526,1.09750285408626,0,0.201057944823262,0.833296006426766,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,1.74380363108377,0,0,0,0,0,0,0.507983154337352,0,0,0,0.102827492703324,0,0.571652865261156,1.00917975910825,1.30788020649984,0.8800594298514,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,1.00084595560703,0.542621605391443,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.50051156317903,0.271265023699736,0.415941723061614,0.356857977594324,0.630809660135739,1.28855556491985,1.20378439891088,0,0,0.664225598535437,0,0.434418072340414,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0,0,0.308419387605311,0.355123450626254,0.492762936082855,0,0.348631135379878,0,0.601519410909855,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,1.95018073810956,1.6068392984416,0.580024309752732,0.308097234229289,0.15350367472613,0.137836572484531,1.6113036730241,1.0151168573996,0.255679882248303,0.445160178233687,0,0,0.638063562472921,0.10115778085555,1.39453664789186,1.25924938732256,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.572499546967965,0.74431673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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1373 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2323 | |||
|TSSclassifier=S | |||
|UniProt=C9JTA4,P31327,Q59HF8,Q6PEK7 | |||
|association_with_transcript=-49bp_to_ENST00000417946,ENST00000518043,NM_001122633_5end | |||
|description=CAGE_peak_5_at_CPS1_5end | |||
|id=chr2:211342345..211342356,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0002549;4.00e-07;2!CL:0002561;4.00e-07;2!CL:1000306;7.85e-07;4!CL:0002547;7.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,3.93e-07,2;CL:0002549,4.17e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.46e-07!365;UBERON:0002199!5.97e-07!45;UBERON:0002416!5.97e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;4.35e-08;15!UBERON:0007376;4.35e-08;15!UBERON:0005629;4.00e-07;2!UBERON:0005358;4.00e-07;2!UBERON:0005933;4.00e-07;2!UBERON:0001886;4.00e-07;2!UBERON:0005942;4.00e-07;2!UBERON:0004086;4.00e-07;2!UBERON:0005282;4.00e-07;2!UBERON:0005281;4.00e-07;2!UBERON:0005932;4.00e-07;2!UBERON:0004797;7.85e-07;4!UBERON:0000415;7.85e-07;4!UBERON:0007240;7.85e-07;4!UBERON:0005742;7.85e-07;4!UBERON:0005734;7.85e-07;4!UBERON:0004664;7.85e-07;4!UBERON:0004663;7.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.72e-08,41;UBERON:0001003,2.52e-08,15;UBERON:0007376,2.52e-08,15;UBERON:0007383,2.52e-08,15;UBERON:0002199,2.94e-07,46;UBERON:0002416,2.94e-07,46;UBERON:0005933,3.93e-07,2;UBERON:0005942,3.93e-07,2;UBERON:0005932,3.93e-07,2;UBERON:0005629,4.17e-07,2;UBERON:0005358,4.17e-07,2;UBERON:0001886,4.17e-07,2;UBERON:0004086,4.17e-07,2;UBERON:0005282,4.17e-07,2;UBERON:0005281,4.17e-07,2 | |||
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| |||
|short_description=p5@CPS1 | |||
}} |
Revision as of 16:23, 12 September 2013
Short description: | p5@CPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000417946, ENST00000518043, NM_001122633_5end |
EntrezGene: | CPS1 |
HGNC: | 2323 |
UniProt: | C9JTA4P31327Q59HF8Q6PEK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 3.93e-07 | 2 |
fibroblast of choroid plexus | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.72e-08 | 41 |
skin epidermis | 2.52e-08 | 15 |
outer epithelium | 2.52e-08 | 15 |
enveloping layer of ectoderm | 2.52e-08 | 15 |
integument | 2.94e-07 | 46 |
integumental system | 2.94e-07 | 46 |
hair root sheath | 3.93e-07 | 2 |
hair outer root sheath | 3.93e-07 | 2 |
bulb of hair follicle | 3.93e-07 | 2 |
vascular plexus | 4.17e-07 | 2 |
ventricle of nervous system | 4.17e-07 | 2 |
choroid plexus | 4.17e-07 | 2 |
brain ventricle | 4.17e-07 | 2 |
ventricular system of brain | 4.17e-07 | 2 |
ventricular system of central nervous system | 4.17e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.