FFCP PHASE1:Hg19::chr4:48782195..48782206,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285527|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29127|TSSclassifier=S|UniProt=|association_with_transcript=-49bp_to_ENST00000515684_5end|description=CAGE_peak_7_at_FRYL_5end|id=chr4:48782195..48782206,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;3.02e-10;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.88e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.89e-13!94;UBERON:0001016!7.89e-13!94;UBERON:0001017!9.51e-13!82;UBERON:0005743!7.06e-12!86;UBERON:0000955!3.31e-11!69;UBERON:0006238!3.31e-11!69;UBERON:0003080!2.10e-09!42;UBERON:0000924!3.89e-09!173;UBERON:0006601!3.89e-09!173;UBERON:0002616!4.09e-09!59;UBERON:0004121!4.33e-09!169;UBERON:0002780!5.70e-09!41;UBERON:0001890!5.70e-09!41;UBERON:0006240!5.70e-09!41;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0001893!5.52e-08!34;UBERON:0002020!6.96e-08!34;UBERON:0003528!6.96e-08!34;UBERON:0002791!1.15e-07!33;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0000033!2.46e-07!123;UBERON:0007023!5.24e-07!115;UBERON:0001869!6.20e-07!32|ontology_enrichment_uberon_v019=UBERON:0002784;5.20e-11;4!UBERON:0001897;3.02e-10;2!UBERON:0010225;3.02e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0002784,3.39e-11,4;UBERON:0001897,8.78e-11,2;UBERON:0010225,8.78e-11,2;UBERON:0003056,4.21e-10,61;UBERON:0001016,1.84e-09,89;UBERON:0001017,2.02e-09,81;UBERON:0002780,2.85e-09,41;UBERON:0001890,2.85e-09,41;UBERON:0003080,2.85e-09,41;UBERON:0006240,2.85e-09,41;UBERON:0003075,3.98e-08,82;UBERON:0007284,3.98e-08,82;UBERON:0004121,4.53e-08,171;UBERON:0000924,4.53e-08,171;UBERON:0006601,4.53e-08,171;UBERON:0001049,8.73e-08,56;UBERON:0005068,8.73e-08,56;UBERON:0006241,8.73e-08,56;UBERON:0007135,8.73e-08,56;UBERON:0002346,1.27e-07,86;UBERON:0010314,2.06e-07,132;UBERON:0010371,7.34e-07,104;UBERON:0000073,8.15e-07,53;UBERON:0002616,8.15e-07,53|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0,0,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0.232401601740905,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0,0,0.515151135268373,0.436194716338694,0,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0.320929027076094,0,0.989553900560148,0.797854630486527,0,0,0,0.622822248995575,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,2.43806866313962,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0,0.351339142772504,0.392937226493138,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0.417989933073621,0.516833518338658,0.71153252537342,0.33472061276467,0,0.760272105718513,0,1.10298924103761,0,0.803697554556718,0.22452937262617,0.675668882899933,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0.149448680551801,0.352303495931295,0,0.280901613404497,0,0.245668634623536,0.309977343527296,2.37600571456411,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,1.20036438433761,0.103052529238439,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0,0.818238361772504,0.286804595389004,0,0.530119073285941,0.348581828608555,0.10366105501537,0.252320850875628,0.72995471815166,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0,0,0,0.695582429850461,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.503946384596579,0.425325291727159,0.358234090811393,0.290633938513962,0,4.43396914106349,0.176096868026452,0.414656231081544,0.720599767084807,1.00993946741104,0.444485260045183,0.763976851116555,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.1447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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29127 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_ENST00000515684_5end | |||
|description=CAGE_peak_7_at_FRYL_5end | |||
|id=chr4:48782195..48782206,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.02e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.89e-13!94;UBERON:0001016!7.89e-13!94;UBERON:0001017!9.51e-13!82;UBERON:0005743!7.06e-12!86;UBERON:0000955!3.31e-11!69;UBERON:0006238!3.31e-11!69;UBERON:0003080!2.10e-09!42;UBERON:0000924!3.89e-09!173;UBERON:0006601!3.89e-09!173;UBERON:0002616!4.09e-09!59;UBERON:0004121!4.33e-09!169;UBERON:0002780!5.70e-09!41;UBERON:0001890!5.70e-09!41;UBERON:0006240!5.70e-09!41;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0001893!5.52e-08!34;UBERON:0002020!6.96e-08!34;UBERON:0003528!6.96e-08!34;UBERON:0002791!1.15e-07!33;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0000033!2.46e-07!123;UBERON:0007023!5.24e-07!115;UBERON:0001869!6.20e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;5.20e-11;4!UBERON:0001897;3.02e-10;2!UBERON:0010225;3.02e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,3.39e-11,4;UBERON:0001897,8.78e-11,2;UBERON:0010225,8.78e-11,2;UBERON:0003056,4.21e-10,61;UBERON:0001016,1.84e-09,89;UBERON:0001017,2.02e-09,81;UBERON:0002780,2.85e-09,41;UBERON:0001890,2.85e-09,41;UBERON:0003080,2.85e-09,41;UBERON:0006240,2.85e-09,41;UBERON:0003075,3.98e-08,82;UBERON:0007284,3.98e-08,82;UBERON:0004121,4.53e-08,171;UBERON:0000924,4.53e-08,171;UBERON:0006601,4.53e-08,171;UBERON:0001049,8.73e-08,56;UBERON:0005068,8.73e-08,56;UBERON:0006241,8.73e-08,56;UBERON:0007135,8.73e-08,56;UBERON:0002346,1.27e-07,86;UBERON:0010314,2.06e-07,132;UBERON:0010371,7.34e-07,104;UBERON:0000073,8.15e-07,53;UBERON:0002616,8.15e-07,53 | |||
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| |||
|short_description=p7@FRYL | |||
}} |
Revision as of 11:04, 13 September 2013
Short description: | p7@FRYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_FRYL_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000515684_5end |
EntrezGene: | FRYL |
HGNC: | 29127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 3.39e-11 | 4 |
dorsal plus ventral thalamus | 8.78e-11 | 2 |
thalamic complex | 8.78e-11 | 2 |
pre-chordal neural plate | 4.21e-10 | 61 |
nervous system | 1.84e-09 | 89 |
central nervous system | 2.02e-09 | 81 |
regional part of forebrain | 2.85e-09 | 41 |
forebrain | 2.85e-09 | 41 |
anterior neural tube | 2.85e-09 | 41 |
future forebrain | 2.85e-09 | 41 |
neural plate | 3.98e-08 | 82 |
presumptive neural plate | 3.98e-08 | 82 |
ectoderm-derived structure | 4.53e-08 | 171 |
ectoderm | 4.53e-08 | 171 |
presumptive ectoderm | 4.53e-08 | 171 |
neural tube | 8.73e-08 | 56 |
neural rod | 8.73e-08 | 56 |
future spinal cord | 8.73e-08 | 56 |
neural keel | 8.73e-08 | 56 |
neurectoderm | 1.27e-07 | 86 |
structure with developmental contribution from neural crest | 2.06e-07 | 132 |
ecto-epithelium | 7.34e-07 | 104 |
regional part of nervous system | 8.15e-07 | 53 |
regional part of brain | 8.15e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.