FFCP PHASE1:Hg19::chr4:102735026..102735056,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55024|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18233|TSSclassifier=S|UniProt=Q8NDB2|association_with_transcript=43bp_to_ENST00000444316,NM_001083907,uc003hvz.3_5end|coexpression_cluster_id=C47|description=CAGE_peak_4_at_BANK1_5end|id=chr4:102735026..102735056,+|ontology_enrichment_celltype=CL:0000236!2.15e-34!14;CL:0000945!3.55e-34!24;CL:0000826!3.55e-34!24;CL:0000542!1.77e-15!53;CL:0000051!1.77e-15!53;CL:0000738!2.98e-15!140;CL:0000838!3.32e-14!52;CL:0002087!6.12e-14!119;CL:0000037!1.49e-10!172;CL:0000566!1.49e-10!172;CL:0000988!1.90e-09!182;CL:0002031!3.08e-09!124;CL:0002032!2.62e-08!165;CL:0000837!2.62e-08!165;CL:0000842!5.54e-08!3;CL:0000817!7.53e-08!3|ontology_enrichment_celltype_v019=CL:0000236;2.15e-53;13!CL:0000945;5.54e-49;24!CL:0000542;9.46e-17;53!CL:0000226;5.65e-14;3!CL:0000842;5.65e-14;3|ontology_enrichment_celltype_v019_2=CL:0000236,1.29e-57,14;CL:0000945,5.46e-49,24;CL:0000826,5.46e-49,24;CL:0000542,8.10e-23,53;CL:0000051,8.10e-23,53;CL:0000838,1.40e-20,52;CL:0000226,5.16e-14,3;CL:0000842,5.16e-14,3;CL:0002087,2.19e-13,115;CL:0000738,8.20e-12,136;CL:0000785,1.72e-10,2;CL:0000955,1.72e-10,2;CL:0000818,1.72e-10,2;CL:0000954,1.72e-10,2;CL:0000816,1.72e-10,2;CL:0000037,1.19e-08,168;CL:0000988,5.71e-08,177;CL:0002031,8.42e-08,120;CL:0000817,2.89e-07,3|ontology_enrichment_development_v019=CL:0000051;9.46e-17;53!CL:0000954;1.68e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;9.50e-08;10|ontology_enrichment_disease_v019_2=DOID:0060058,9.33e-08,10|ontology_enrichment_uberon=UBERON:0000178!5.05e-22!15;UBERON:0000179!5.05e-22!15;UBERON:0000463!5.05e-22!15;UBERON:0007023!1.28e-18!115;UBERON:0002193!5.66e-09!112;UBERON:0002390!1.34e-08!102;UBERON:0003061!1.34e-08!102|ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-42;15!UBERON:0000179;1.92e-42;15!UBERON:0000463;1.92e-42;15!UBERON:0002390;2.39e-24;32!UBERON:0002193;6.84e-18;42!UBERON:0002106;3.28e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.89e-42,15;UBERON:0000179,1.89e-42,15;UBERON:0000463,1.89e-42,15;UBERON:0007023,3.76e-09,114;UBERON:0002193,1.57e-08,108;UBERON:0002390,2.57e-07,98;UBERON:0003061,2.57e-07,98;UBERON:0002106,3.08e-07,3;UBERON:0004854,3.08e-07,3;UBERON:0009034,3.08e-07,3;UBERON:0002095,3.08e-07,3;UBERON:0004782,3.08e-07,3;UBERON:0003281,3.08e-07,3;UBERON:0009664,3.08e-07,3;UBERON:0002296,3.08e-07,3;UBERON:0005602,3.08e-07,3;UBERON:0001179,3.08e-07,3;UBERON:0006293,3.08e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,7.20444965396805,10.9470309015315,0,0,0.200544447470142,0,0.895661896959697,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0.512321413058201,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,35.1992488922645,45.3295047347569,48.033499708632,47.3670547048823,46.4459344961774,35.0598988372235,36.3574680031674,35.2999889178085,27.3222225172535,31.1235710366598,36.3159566718967,0,2.80254281490768,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,1.50999940573032,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,10.6563997938756,9.94028369285088,3.98753031021914,8.09988036556483,11.1067813733272,7.13320642311989,12.9607544937148,7.13812658664843,0,0,0,5.945701604023,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,8.01223355040328,0,0,0.246169610922139,0,0,0,0,0.591860433821602,11.974154617347,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0,0,0,22.8068486519583,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32773639572207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0.414239055347196,7.44249032717926,0,2.67943716437971,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18233 | |||
|TSSclassifier=S | |||
|UniProt=Q8NDB2 | |||
|association_with_transcript=43bp_to_ENST00000444316,NM_001083907,uc003hvz.3_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_BANK1_5end | |||
|id=chr4:102735026..102735056,+ | |||
|ontology_enrichment_celltype=CL:0000236!2.15e-34!14;CL:0000945!3.55e-34!24;CL:0000826!3.55e-34!24;CL:0000542!1.77e-15!53;CL:0000051!1.77e-15!53;CL:0000738!2.98e-15!140;CL:0000838!3.32e-14!52;CL:0002087!6.12e-14!119;CL:0000037!1.49e-10!172;CL:0000566!1.49e-10!172;CL:0000988!1.90e-09!182;CL:0002031!3.08e-09!124;CL:0002032!2.62e-08!165;CL:0000837!2.62e-08!165;CL:0000842!5.54e-08!3;CL:0000817!7.53e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.15e-53;13!CL:0000945;5.54e-49;24!CL:0000542;9.46e-17;53!CL:0000226;5.65e-14;3!CL:0000842;5.65e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.29e-57,14;CL:0000945,5.46e-49,24;CL:0000826,5.46e-49,24;CL:0000542,8.10e-23,53;CL:0000051,8.10e-23,53;CL:0000838,1.40e-20,52;CL:0000226,5.16e-14,3;CL:0000842,5.16e-14,3;CL:0002087,2.19e-13,115;CL:0000738,8.20e-12,136;CL:0000785,1.72e-10,2;CL:0000955,1.72e-10,2;CL:0000818,1.72e-10,2;CL:0000954,1.72e-10,2;CL:0000816,1.72e-10,2;CL:0000037,1.19e-08,168;CL:0000988,5.71e-08,177;CL:0002031,8.42e-08,120;CL:0000817,2.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;9.46e-17;53!CL:0000954;1.68e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.50e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.33e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.05e-22!15;UBERON:0000179!5.05e-22!15;UBERON:0000463!5.05e-22!15;UBERON:0007023!1.28e-18!115;UBERON:0002193!5.66e-09!112;UBERON:0002390!1.34e-08!102;UBERON:0003061!1.34e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-42;15!UBERON:0000179;1.92e-42;15!UBERON:0000463;1.92e-42;15!UBERON:0002390;2.39e-24;32!UBERON:0002193;6.84e-18;42!UBERON:0002106;3.28e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.89e-42,15;UBERON:0000179,1.89e-42,15;UBERON:0000463,1.89e-42,15;UBERON:0007023,3.76e-09,114;UBERON:0002193,1.57e-08,108;UBERON:0002390,2.57e-07,98;UBERON:0003061,2.57e-07,98;UBERON:0002106,3.08e-07,3;UBERON:0004854,3.08e-07,3;UBERON:0009034,3.08e-07,3;UBERON:0002095,3.08e-07,3;UBERON:0004782,3.08e-07,3;UBERON:0003281,3.08e-07,3;UBERON:0009664,3.08e-07,3;UBERON:0002296,3.08e-07,3;UBERON:0005602,3.08e-07,3;UBERON:0001179,3.08e-07,3;UBERON:0006293,3.08e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,7.20444965396805,10.9470309015315,0,0,0.200544447470142,0,0.895661896959697,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0.512321413058201,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,35.1992488922645,45.3295047347569,48.033499708632,47.3670547048823,46.4459344961774,35.0598988372235,36.3574680031674,35.2999889178085,27.3222225172535,31.1235710366598,36.3159566718967,0,2.80254281490768,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,1.50999940573032,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,10.6563997938756,9.94028369285088,3.98753031021914,8.09988036556483,11.1067813733272,7.13320642311989,12.9607544937148,7.13812658664843,0,0,0,5.945701604023,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,8.01223355040328,0,0,0.246169610922139,0,0,0,0,0.591860433821602,11.974154617347,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0,0,0,22.8068486519583,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32773639572207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0.414239055347196,7.44249032717926,0,2.67943716437971,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,3.57225361422916,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0,0,0,19.6426388577894,2.90060495881097,0,0,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0.968833647540092,0.31037357147929,0,0.0636471582781649,0,0,0,6.93726146050251,1.00411087549747,0,0,0,0,0,0,0,0,0,6.23948760132181,0.320568492303233 | |||
|short_description=p4@BANK1 | |||
}} |
Revision as of 01:49, 13 September 2013
Short description: | p4@BANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BANK1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 43bp_to_ENST00000444316, NM_001083907, uc003hvz.3_5end |
EntrezGene: | BANK1 |
HGNC: | 18233 |
UniProt: | Q8NDB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.29e-57 | 14 |
lymphocyte of B lineage | 5.46e-49 | 24 |
pro-B cell | 5.46e-49 | 24 |
lymphocyte | 8.10e-23 | 53 |
common lymphoid progenitor | 8.10e-23 | 53 |
lymphoid lineage restricted progenitor cell | 1.40e-20 | 52 |
single nucleate cell | 5.16e-14 | 3 |
mononuclear cell | 5.16e-14 | 3 |
nongranular leukocyte | 2.19e-13 | 115 |
leukocyte | 8.20e-12 | 136 |
mature B cell | 1.72e-10 | 2 |
pre-B-II cell | 1.72e-10 | 2 |
transitional stage B cell | 1.72e-10 | 2 |
small pre-B-II cell | 1.72e-10 | 2 |
immature B cell | 1.72e-10 | 2 |
hematopoietic stem cell | 1.19e-08 | 168 |
hematopoietic cell | 5.71e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 8.42e-08 | 120 |
precursor B cell | 2.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.89e-42 | 15 |
haemolymphatic fluid | 1.89e-42 | 15 |
organism substance | 1.89e-42 | 15 |
adult organism | 3.76e-09 | 114 |
hemolymphoid system | 1.57e-08 | 108 |
hematopoietic system | 2.57e-07 | 98 |
blood island | 2.57e-07 | 98 |
spleen | 3.08e-07 | 3 |
gastrointestinal system mesentery | 3.08e-07 | 3 |
stomach region | 3.08e-07 | 3 |
mesentery | 3.08e-07 | 3 |
gastrointestinal system serosa | 3.08e-07 | 3 |
mesentery of stomach | 3.08e-07 | 3 |
gut mesentery | 3.08e-07 | 3 |
dorsal mesentery | 3.08e-07 | 3 |
dorsal mesogastrium | 3.08e-07 | 3 |
peritoneal cavity | 3.08e-07 | 3 |
spleen primordium | 3.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.33e-08 | 10 |
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