FFCP PHASE1:Hg19::chr4:109090408..109090441,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51176|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6551|TSSclassifier=W|UniProt=Q9UJU2,Q659G9|association_with_transcript=-296bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end|description=CAGE_peak_21_at_LEF1_5end|id=chr4:109090408..109090441,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000817;4.27e-10;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;1.76e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1325;2.12e-11;7!DOID:3904;2.12e-11;7!DOID:5409;1.65e-09;4!DOID:3905;5.59e-09;9|ontology_enrichment_disease_v019_2=DOID:1325,2.40e-11,7;DOID:3904,2.40e-11,7;DOID:5409,1.69e-09,4;DOID:3905,6.16e-09,9|ontology_enrichment_uberon=UBERON:0001049!1.71e-40!57;UBERON:0005068!1.71e-40!57;UBERON:0006241!1.71e-40!57;UBERON:0007135!1.71e-40!57;UBERON:0002020!4.47e-36!34;UBERON:0003528!4.47e-36!34;UBERON:0001893!7.05e-36!34;UBERON:0002791!2.93e-34!33;UBERON:0002616!4.68e-34!59;UBERON:0002780!1.75e-33!41;UBERON:0001890!1.75e-33!41;UBERON:0006240!1.75e-33!41;UBERON:0001869!9.54e-33!32;UBERON:0003080!1.70e-32!42;UBERON:0000955!8.36e-29!69;UBERON:0006238!8.36e-29!69;UBERON:0002619!1.28e-27!22;UBERON:0001950!2.21e-27!20;UBERON:0001017!6.56e-26!82;UBERON:0005743!3.27e-24!86;UBERON:0007023!4.52e-24!115;UBERON:0000956!8.82e-24!25;UBERON:0000203!8.82e-24!25;UBERON:0003075!3.48e-23!86;UBERON:0007284!3.48e-23!86;UBERON:0000073!2.02e-22!94;UBERON:0001016!2.02e-22!94;UBERON:0002346!1.11e-21!90;UBERON:0003056!7.40e-20!61;UBERON:0000153!1.50e-16!129;UBERON:0007811!1.50e-16!129;UBERON:0000033!1.52e-14!123;UBERON:0002308!4.77e-14!9;UBERON:0000125!4.77e-14!9;UBERON:0001871!1.44e-12!7;UBERON:0000200!1.71e-12!6;UBERON:0002420!7.60e-11!9;UBERON:0007245!7.60e-11!9;UBERON:0010009!7.60e-11!9;UBERON:0010011!7.60e-11!9;UBERON:0000454!7.60e-11!9;UBERON:0009663!1.10e-10!7;UBERON:0001872!5.15e-10!5;UBERON:0004121!2.51e-09!169;UBERON:0003076!3.99e-09!15;UBERON:0003057!3.99e-09!15;UBERON:0000924!6.97e-09!173;UBERON:0006601!6.97e-09!173;UBERON:0004732!1.54e-08!13;UBERON:0000025!2.12e-08!194;UBERON:0002298!2.79e-08!8;UBERON:0000064!5.68e-08!219;UBERON:0002771!1.77e-07!3;UBERON:0005383!3.55e-07!3;UBERON:0005382!3.55e-07!3;UBERON:0004733!5.04e-07!12;UBERON:0002028!5.04e-07!12;UBERON:0007277!5.04e-07!12;UBERON:0006331!8.94e-07!3|ontology_enrichment_uberon_v019=UBERON:0002370;5.28e-18;2!UBERON:0005058;5.28e-18;2!UBERON:0009113;5.28e-18;2!UBERON:0000941;1.76e-09;1!UBERON:0001785;1.76e-09;1!UBERON:0002464;1.76e-09;1!UBERON:0004904;1.76e-09;1!UBERON:0001021;1.76e-09;1!UBERON:0004177;9.76e-08;5!UBERON:0005057;9.76e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.62e-09,1;UBERON:0001785,1.62e-09,1;UBERON:0002464,1.62e-09,1;UBERON:0004904,1.62e-09,1;UBERON:0001021,1.62e-09,1;UBERON:0003902,1.62e-09,1;UBERON:0005425,1.62e-09,1;UBERON:0002370,1.92e-09,4;UBERON:0005058,1.92e-09,4;UBERON:0009113,1.92e-09,4;UBERON:0003295,1.92e-09,4;UBERON:0005562,1.92e-09,4;UBERON:0004807,2.28e-07,28|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0.651844533267181,2.8406868344084,3.89653456815823,0,0.294605907474837,0.443067789167242,0,0,0,0,0.276350017785848,0,1.33457906845854,1.07016331235885,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.464775771478074,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,8.94469120453958,8.89273041855176,1.75368900001705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.331737779793674,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,6.13159789174419,1.56980256395025,0,0,0,0,0,0,0,0,0,5.40971599355228,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22598074078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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=W | |||
|UniProt=Q9UJU2,Q659G9 | |||
|association_with_transcript=-296bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | |||
|description=CAGE_peak_21_at_LEF1_5end | |||
|id=chr4:109090408..109090441,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;4.27e-10;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.76e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;2.12e-11;7!DOID:3904;2.12e-11;7!DOID:5409;1.65e-09;4!DOID:3905;5.59e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,2.40e-11,7;DOID:3904,2.40e-11,7;DOID:5409,1.69e-09,4;DOID:3905,6.16e-09,9 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-40!57;UBERON:0005068!1.71e-40!57;UBERON:0006241!1.71e-40!57;UBERON:0007135!1.71e-40!57;UBERON:0002020!4.47e-36!34;UBERON:0003528!4.47e-36!34;UBERON:0001893!7.05e-36!34;UBERON:0002791!2.93e-34!33;UBERON:0002616!4.68e-34!59;UBERON:0002780!1.75e-33!41;UBERON:0001890!1.75e-33!41;UBERON:0006240!1.75e-33!41;UBERON:0001869!9.54e-33!32;UBERON:0003080!1.70e-32!42;UBERON:0000955!8.36e-29!69;UBERON:0006238!8.36e-29!69;UBERON:0002619!1.28e-27!22;UBERON:0001950!2.21e-27!20;UBERON:0001017!6.56e-26!82;UBERON:0005743!3.27e-24!86;UBERON:0007023!4.52e-24!115;UBERON:0000956!8.82e-24!25;UBERON:0000203!8.82e-24!25;UBERON:0003075!3.48e-23!86;UBERON:0007284!3.48e-23!86;UBERON:0000073!2.02e-22!94;UBERON:0001016!2.02e-22!94;UBERON:0002346!1.11e-21!90;UBERON:0003056!7.40e-20!61;UBERON:0000153!1.50e-16!129;UBERON:0007811!1.50e-16!129;UBERON:0000033!1.52e-14!123;UBERON:0002308!4.77e-14!9;UBERON:0000125!4.77e-14!9;UBERON:0001871!1.44e-12!7;UBERON:0000200!1.71e-12!6;UBERON:0002420!7.60e-11!9;UBERON:0007245!7.60e-11!9;UBERON:0010009!7.60e-11!9;UBERON:0010011!7.60e-11!9;UBERON:0000454!7.60e-11!9;UBERON:0009663!1.10e-10!7;UBERON:0001872!5.15e-10!5;UBERON:0004121!2.51e-09!169;UBERON:0003076!3.99e-09!15;UBERON:0003057!3.99e-09!15;UBERON:0000924!6.97e-09!173;UBERON:0006601!6.97e-09!173;UBERON:0004732!1.54e-08!13;UBERON:0000025!2.12e-08!194;UBERON:0002298!2.79e-08!8;UBERON:0000064!5.68e-08!219;UBERON:0002771!1.77e-07!3;UBERON:0005383!3.55e-07!3;UBERON:0005382!3.55e-07!3;UBERON:0004733!5.04e-07!12;UBERON:0002028!5.04e-07!12;UBERON:0007277!5.04e-07!12;UBERON:0006331!8.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.28e-18;2!UBERON:0005058;5.28e-18;2!UBERON:0009113;5.28e-18;2!UBERON:0000941;1.76e-09;1!UBERON:0001785;1.76e-09;1!UBERON:0002464;1.76e-09;1!UBERON:0004904;1.76e-09;1!UBERON:0001021;1.76e-09;1!UBERON:0004177;9.76e-08;5!UBERON:0005057;9.76e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.62e-09,1;UBERON:0001785,1.62e-09,1;UBERON:0002464,1.62e-09,1;UBERON:0004904,1.62e-09,1;UBERON:0001021,1.62e-09,1;UBERON:0003902,1.62e-09,1;UBERON:0005425,1.62e-09,1;UBERON:0002370,1.92e-09,4;UBERON:0005058,1.92e-09,4;UBERON:0009113,1.92e-09,4;UBERON:0003295,1.92e-09,4;UBERON:0005562,1.92e-09,4;UBERON:0004807,2.28e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0.651844533267181,2.8406868344084,3.89653456815823,0,0.294605907474837,0.443067789167242,0,0,0,0,0.276350017785848,0,1.33457906845854,1.07016331235885,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.464775771478074,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,8.94469120453958,8.89273041855176,1.75368900001705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.331737779793674,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,6.13159789174419,1.56980256395025,0,0,0,0,0,0,0,0,0,5.40971599355228,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.26446520348538,0,0,0,0.157204305099666,0.414239055347196,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.854183854313742,0.876336514945499,0,0.665574309221114,0.124192805882767,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28373691508397,0,0,0,0,0,0.798169295285756,1.43581454968528,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.620060389503552,0.19024743058172,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1412434090366,0,6.43792667622072,0,3.62310824560016,0,0,0,0,0,0.981542335574726,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.430018749454354,0.473314686579554,0.203974470572744,0.436350690340377,0,0,0,0,0,0,1.0135880080915,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0.23806443146374,3.68156786065235,5.09012657226035,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p21@LEF1 | |||
}} |
Revision as of 02:00, 13 September 2013
Short description: | p21@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_LEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -296bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.62e-09 | 1 |
cranial nerve | 1.62e-09 | 1 |
nerve trunk | 1.62e-09 | 1 |
nerve connecting eye with brain | 1.62e-09 | 1 |
nerve | 1.62e-09 | 1 |
retinal neural layer | 1.62e-09 | 1 |
presumptive neural retina | 1.62e-09 | 1 |
thymus | 1.92e-09 | 4 |
hemolymphoid system gland | 1.92e-09 | 4 |
thymic region | 1.92e-09 | 4 |
pharyngeal gland | 1.92e-09 | 4 |
thymus primordium | 1.92e-09 | 4 |
respiratory system epithelium | 2.28e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 2.40e-11 | 7 |
bronchogenic carcinoma | 2.40e-11 | 7 |
lung small cell carcinoma | 1.69e-09 | 4 |
lung carcinoma | 6.16e-09 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.