FFCP PHASE1:Hg19::chr4:169633250..169633285,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23022|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17068|TSSclassifier=W|UniProt=D6R9F5|association_with_transcript=-24bp_to_ENST00000510998_5end|description=CAGE_peak_28_at_PALLD_5end|id=chr4:169633250..169633285,+|ontology_enrichment_celltype=CL:0000136!1.40e-07!15|ontology_enrichment_celltype_v019=CL:0002617;5.92e-25;2!CL:0000515;5.97e-17;3!CL:0000346;2.20e-16;3!CL:1000428;2.20e-16;3!CL:0000136;7.11e-15;13!CL:0000222;2.78e-13;1!CL:0000056;5.89e-13;4!CL:0002559;3.26e-10;5!CL:0000680;8.78e-08;7!CL:0002321;9.49e-08;15|ontology_enrichment_celltype_v019_2=CL:0002617,7.09e-25,2;CL:0000346,1.74e-16,3;CL:1000428,1.74e-16,3;CL:0000136,5.84e-13,15;CL:0000515,6.07e-13,4;CL:0002559,2.84e-10,5|ontology_enrichment_development_v019=CL:0000515;5.89e-13;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000412;2.20e-16;3!UBERON:0001992;2.20e-16;3!UBERON:0000310;2.84e-11;10!UBERON:0001443;2.68e-10;11!UBERON:0002073;3.26e-10;5!UBERON:0003688;1.17e-08;6!UBERON:0002358;1.17e-08;6!UBERON:0003684;1.17e-08;6!UBERON:0001178;1.17e-08;6!UBERON:0001134;3.14e-07;16!UBERON:0002036;3.14e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.74e-16,3;UBERON:0001992,1.74e-16,3;UBERON:0000310,2.84e-11,10;UBERON:0001443,2.68e-10,11;UBERON:0002073,2.84e-10,5;UBERON:0005086,2.84e-10,5;UBERON:0003688,1.26e-08,6;UBERON:0002358,1.26e-08,6;UBERON:0003684,1.26e-08,6;UBERON:0001178,1.26e-08,6|phase1_expression=2.18014055124668,4.49611100171065,1.83240725324762,0,0,0.872338524100369,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,1.56727360739044,0,0.273748850145768,0,0.305653622991805,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0.290209238628584,0,1.24564449799115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,5.5670016293577,0.486634870302636,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.368199594569197,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31650090668127,0.821905290201534,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68808170616869,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0.307007349452259,0,0,0,0,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0.889811221596536,0,0,0.15543720058278,0.591420599958536,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0.343395705182793,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.190941474834495,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0|short_description=p28@PALLD}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |||
|TSSclassifier=W | |||
|UniProt=D6R9F5 | |||
|association_with_transcript=-24bp_to_ENST00000510998_5end | |||
|description=CAGE_peak_28_at_PALLD_5end | |||
|id=chr4:169633250..169633285,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.40e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002617;5.92e-25;2!CL:0000515;5.97e-17;3!CL:0000346;2.20e-16;3!CL:1000428;2.20e-16;3!CL:0000136;7.11e-15;13!CL:0000222;2.78e-13;1!CL:0000056;5.89e-13;4!CL:0002559;3.26e-10;5!CL:0000680;8.78e-08;7!CL:0002321;9.49e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,7.09e-25,2;CL:0000346,1.74e-16,3;CL:1000428,1.74e-16,3;CL:0000136,5.84e-13,15;CL:0000515,6.07e-13,4;CL:0002559,2.84e-10,5 | |||
|ontology_enrichment_development_v019=CL:0000515;5.89e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.20e-16;3!UBERON:0001992;2.20e-16;3!UBERON:0000310;2.84e-11;10!UBERON:0001443;2.68e-10;11!UBERON:0002073;3.26e-10;5!UBERON:0003688;1.17e-08;6!UBERON:0002358;1.17e-08;6!UBERON:0003684;1.17e-08;6!UBERON:0001178;1.17e-08;6!UBERON:0001134;3.14e-07;16!UBERON:0002036;3.14e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.74e-16,3;UBERON:0001992,1.74e-16,3;UBERON:0000310,2.84e-11,10;UBERON:0001443,2.68e-10,11;UBERON:0002073,2.84e-10,5;UBERON:0005086,2.84e-10,5;UBERON:0003688,1.26e-08,6;UBERON:0002358,1.26e-08,6;UBERON:0003684,1.26e-08,6;UBERON:0001178,1.26e-08,6 | |||
|phase1_expression=2.18014055124668,4.49611100171065,1.83240725324762,0,0,0.872338524100369,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,1.56727360739044,0,0.273748850145768,0,0.305653622991805,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0.290209238628584,0,1.24564449799115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,5.5670016293577,0.486634870302636,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.368199594569197,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31650090668127,0.821905290201534,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68808170616869,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0.307007349452259,0,0,0,0,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0.889811221596536,0,0,0.15543720058278,0.591420599958536,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0.343395705182793,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.190941474834495,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p28@PALLD | |||
}} |
Revision as of 03:18, 13 September 2013
Short description: | p28@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_PALLD_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000510998_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | D6R9F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 7.09e-25 | 2 |
hair follicle dermal papilla cell | 1.74e-16 | 3 |
stem cell of epidermis | 1.74e-16 | 3 |
fat cell | 5.84e-13 | 15 |
skeletal muscle myoblast | 6.07e-13 | 4 |
hair follicle cell | 2.84e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.74e-16 | 3 |
papillary layer of dermis | 1.74e-16 | 3 |
breast | 2.84e-11 | 10 |
chest | 2.68e-10 | 11 |
hair follicle | 2.84e-10 | 5 |
hair follicle placode | 2.84e-10 | 5 |
omentum | 1.26e-08 | 6 |
peritoneum | 1.26e-08 | 6 |
abdominal cavity | 1.26e-08 | 6 |
visceral peritoneum | 1.26e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.