FFCP PHASE1:Hg19::chr5:55008101..55008134,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=153129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26907 | |||
|TSSclassifier=S | |||
|UniProt=D6RBB9,D6RDH2,D6RIW7,D6R9X0 | |||
|association_with_transcript=0bp_to_ENST00000505563,ENST00000506624,ENST00000507216,ENST00000513275,ENST00000513993_5end | |||
|description=CAGE_peak_2_at_SLC38A9_5end | |||
|id=chr5:55008101..55008134,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;8.90e-10;41!UBERON:0001890;8.90e-10;41!UBERON:0003528;4.71e-09;34!UBERON:0002020;4.71e-09;34!UBERON:0002791;5.12e-09;32!UBERON:0001893;6.27e-09;34!UBERON:0001869;7.48e-09;32!UBERON:0000073;1.38e-08;53!UBERON:0002616;1.38e-08;53!UBERON:0002619;2.91e-08;22!UBERON:0000956;1.68e-07;25!UBERON:0000203;1.68e-07;25!UBERON:0001950;1.75e-07;20!UBERON:0000955;2.57e-07;68!UBERON:0001017;8.49e-07;75 | |||
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| |||
|short_description=p2@SLC38A9 | |||
}} |
Revision as of 15:54, 13 September 2013
Short description: | p2@SLC38A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SLC38A9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505563, ENST00000506624, ENST00000507216, ENST00000513275, ENST00000513993_5end |
EntrezGene: | SLC38A9 |
HGNC: | 26907 |
UniProt: | D6RBB9D6RDH2D6RIW7D6R9X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.51e-16 | 81 |
nervous system | 5.70e-15 | 89 |
brain | 3.77e-14 | 68 |
future brain | 3.77e-14 | 68 |
neural tube | 4.56e-14 | 56 |
neural rod | 4.56e-14 | 56 |
future spinal cord | 4.56e-14 | 56 |
neural keel | 4.56e-14 | 56 |
regional part of nervous system | 5.87e-13 | 53 |
regional part of brain | 5.87e-13 | 53 |
regional part of forebrain | 1.32e-12 | 41 |
forebrain | 1.32e-12 | 41 |
anterior neural tube | 1.32e-12 | 41 |
future forebrain | 1.32e-12 | 41 |
ectoderm-derived structure | 5.72e-11 | 171 |
ectoderm | 5.72e-11 | 171 |
presumptive ectoderm | 5.72e-11 | 171 |
telencephalon | 3.39e-10 | 34 |
brain grey matter | 4.33e-10 | 34 |
gray matter | 4.33e-10 | 34 |
regional part of telencephalon | 1.44e-09 | 32 |
cerebral hemisphere | 1.65e-09 | 32 |
ecto-epithelium | 1.88e-08 | 104 |
organ system subdivision | 3.67e-08 | 223 |
regional part of cerebral cortex | 5.28e-08 | 22 |
cerebral cortex | 2.07e-07 | 25 |
pallium | 2.07e-07 | 25 |
neocortex | 3.03e-07 | 20 |
neural plate | 5.98e-07 | 82 |
presumptive neural plate | 5.98e-07 | 82 |
neurectoderm | 8.36e-07 | 86 |
pre-chordal neural plate | 8.96e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.