FFCP PHASE1:Hg19::chr5:58334967..58334976,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5144|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8783|TSSclassifier=W|UniProt=Q08499|association_with_transcript=362bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end|coexpression_cluster_id=C1762|description=CAGE_peak_44_at_PDE4D_5end|id=chr5:58334967..58334976,-|ontology_enrichment_celltype=CL:0000791!5.01e-10!18;CL:0000789!5.01e-10!18;CL:0002420!5.01e-10!18;CL:0002419!5.01e-10!18;CL:0000790!5.01e-10!18;CL:0000624!2.20e-08!6;CL:0000084!2.69e-07!25;CL:0000827!2.69e-07!25|ontology_enrichment_celltype_v019=CL:0000623;4.17e-30;3!CL:0000767;4.70e-29;3!CL:0000791;1.35e-18;18!CL:0000789;1.35e-18;18!CL:0002419;1.35e-18;18!CL:0000625;3.83e-14;11!CL:0000226;1.24e-13;3!CL:0000842;1.24e-13;3!CL:0000084;2.78e-13;25!CL:0000094;2.76e-11;8!CL:0000081;2.39e-08;11!CL:0000624;3.30e-07;6!CL:0000542;3.46e-07;53|ontology_enrichment_celltype_v019_2=CL:0000623,3.78e-30,3;CL:0000825,3.78e-30,3;CL:0000767,2.40e-29,3;CL:0000791,1.53e-18,18;CL:0000789,1.53e-18,18;CL:0002420,1.53e-18,18;CL:0002419,1.53e-18,18;CL:0000790,1.53e-18,18;CL:0000625,3.90e-14,11;CL:0000838,1.04e-13,52;CL:0000226,1.41e-13,3;CL:0000842,1.41e-13,3;CL:0000542,1.99e-13,53;CL:0000051,1.99e-13,53;CL:0000738,2.99e-13,136;CL:0000084,3.03e-13,25;CL:0000827,3.03e-13,25;CL:0000094,2.15e-11,8;CL:0000037,2.81e-10,168;CL:0002087,6.36e-10,115;CL:0000988,1.24e-09,177;CL:0000081,2.00e-08,11;CL:0002032,7.23e-08,161;CL:0000837,7.23e-08,161;CL:0000624,3.68e-07,6|ontology_enrichment_development_v019=CL:0000790;1.35e-18;18!UBERON:0005062;1.61e-10;4!UBERON:0007284;1.61e-10;4!CL:0000051;3.46e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002133;4.45e-20;2!UBERON:0003978;1.02e-13;3!UBERON:0000946;1.02e-13;3!UBERON:0002134;3.40e-11;1!UBERON:0005208;3.40e-11;1!UBERON:0004145;3.40e-11;1!UBERON:0005946;3.40e-11;1!UBERON:0005965;3.40e-11;1!UBERON:0002078;3.40e-11;1!UBERON:0002135;1.21e-10;1!UBERON:0001389;1.21e-10;1!UBERON:0000026;1.21e-10;1!UBERON:0008784;1.21e-10;1!UBERON:0006058;1.21e-10;1!UBERON:0003663;1.21e-10;1!UBERON:0004256;1.21e-10;1!UBERON:0004708;1.21e-10;1!UBERON:0002101;1.21e-10;1!UBERON:0004709;1.21e-10;1!UBERON:0002529;1.21e-10;1!UBERON:0010538;1.21e-10;1!UBERON:0003661;1.21e-10;1!UBERON:0010890;1.21e-10;1!UBERON:0002471;1.21e-10;1!UBERON:0001383;1.21e-10;1!UBERON:0010758;1.21e-10;1!UBERON:0010707;1.21e-10;1!UBERON:0000978;1.21e-10;1!UBERON:0002103;1.21e-10;1!UBERON:0001665;1.21e-10;1!UBERON:0003823;1.21e-10;1!UBERON:0000154;1.21e-10;1!UBERON:0010709;1.21e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.45e-20,2;UBERON:0003978,1.02e-13,3;UBERON:0009751,1.02e-13,3;UBERON:0000946,1.02e-13,3;UBERON:0002523,1.02e-13,3;UBERON:0005983,1.02e-13,3;UBERON:0002165,1.02e-13,3;UBERON:0002062,1.02e-13,3;UBERON:0007280,1.02e-13,3;UBERON:0002134,3.76e-11,1;UBERON:0005208,3.76e-11,1;UBERON:0005946,3.76e-11,1;UBERON:0005965,3.76e-11,1;UBERON:0002078,3.76e-11,1;UBERON:0002135,1.10e-10,1;UBERON:0005418,1.21e-10,1;UBERON:0001389,1.21e-10,1;UBERON:0000026,1.21e-10,1;UBERON:0008784,1.21e-10,1;UBERON:0006058,1.21e-10,1;UBERON:0003663,1.21e-10,1;UBERON:0004256,1.21e-10,1;UBERON:0004708,1.21e-10,1;UBERON:0002101,1.21e-10,1;UBERON:0004709,1.21e-10,1;UBERON:0002529,1.21e-10,1;UBERON:0010538,1.21e-10,1;UBERON:0003661,1.21e-10,1;UBERON:0010890,1.21e-10,1;UBERON:0002471,1.21e-10,1;UBERON:0001383,1.21e-10,1;UBERON:0004357,1.21e-10,1;UBERON:0004347,1.21e-10,1;UBERON:0005420,1.21e-10,1;UBERON:0005732,1.21e-10,1;UBERON:0010758,1.21e-10,1;UBERON:0010707,1.21e-10,1;UBERON:0000978,1.21e-10,1;UBERON:0002103,1.21e-10,1;UBERON:0001665,1.21e-10,1;UBERON:0003823,1.21e-10,1;UBERON:0000154,1.21e-10,1;UBERON:0010709,1.21e-10,1;UBERON:0005733,1.21e-10,1;UBERON:0005730,1.21e-10,1|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,10.747223146722,1.85779347979291,0,0,0.369754010166788,0,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,1.17903228824749,2.05601498999509,0,0.32592226663359,0.473447805734733,0,0.557052284425868,0.589211814949674,0.221533894583621,0,0,0.130059347559878,0.328875809207352,0,0.289803085735052,0.444859689486181,0,0,0.226618685395132,0.766440987203842,0,0.506039384039006,0,0,0,0.301150238155546,0,1.24930726552346,0.236777252044017,0,3.02410114837099,3.20928234940209,2.89648807765598,0,0,0,0,0,0.579386075843295,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0,0.20415417125489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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=W | |||
|UniProt=Q08499 | |||
|association_with_transcript=362bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | |||
|coexpression_cluster_id=C1762 | |||
|description=CAGE_peak_44_at_PDE4D_5end | |||
|id=chr5:58334967..58334976,- | |||
|ontology_enrichment_celltype=CL:0000791!5.01e-10!18;CL:0000789!5.01e-10!18;CL:0002420!5.01e-10!18;CL:0002419!5.01e-10!18;CL:0000790!5.01e-10!18;CL:0000624!2.20e-08!6;CL:0000084!2.69e-07!25;CL:0000827!2.69e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.17e-30;3!CL:0000767;4.70e-29;3!CL:0000791;1.35e-18;18!CL:0000789;1.35e-18;18!CL:0002419;1.35e-18;18!CL:0000625;3.83e-14;11!CL:0000226;1.24e-13;3!CL:0000842;1.24e-13;3!CL:0000084;2.78e-13;25!CL:0000094;2.76e-11;8!CL:0000081;2.39e-08;11!CL:0000624;3.30e-07;6!CL:0000542;3.46e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.78e-30,3;CL:0000825,3.78e-30,3;CL:0000767,2.40e-29,3;CL:0000791,1.53e-18,18;CL:0000789,1.53e-18,18;CL:0002420,1.53e-18,18;CL:0002419,1.53e-18,18;CL:0000790,1.53e-18,18;CL:0000625,3.90e-14,11;CL:0000838,1.04e-13,52;CL:0000226,1.41e-13,3;CL:0000842,1.41e-13,3;CL:0000542,1.99e-13,53;CL:0000051,1.99e-13,53;CL:0000738,2.99e-13,136;CL:0000084,3.03e-13,25;CL:0000827,3.03e-13,25;CL:0000094,2.15e-11,8;CL:0000037,2.81e-10,168;CL:0002087,6.36e-10,115;CL:0000988,1.24e-09,177;CL:0000081,2.00e-08,11;CL:0002032,7.23e-08,161;CL:0000837,7.23e-08,161;CL:0000624,3.68e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.35e-18;18!UBERON:0005062;1.61e-10;4!UBERON:0007284;1.61e-10;4!CL:0000051;3.46e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.45e-20,2;UBERON:0003978,1.02e-13,3;UBERON:0009751,1.02e-13,3;UBERON:0000946,1.02e-13,3;UBERON:0002523,1.02e-13,3;UBERON:0005983,1.02e-13,3;UBERON:0002165,1.02e-13,3;UBERON:0002062,1.02e-13,3;UBERON:0007280,1.02e-13,3;UBERON:0002134,3.76e-11,1;UBERON:0005208,3.76e-11,1;UBERON:0005946,3.76e-11,1;UBERON:0005965,3.76e-11,1;UBERON:0002078,3.76e-11,1;UBERON:0002135,1.10e-10,1;UBERON:0005418,1.21e-10,1;UBERON:0001389,1.21e-10,1;UBERON:0000026,1.21e-10,1;UBERON:0008784,1.21e-10,1;UBERON:0006058,1.21e-10,1;UBERON:0003663,1.21e-10,1;UBERON:0004256,1.21e-10,1;UBERON:0004708,1.21e-10,1;UBERON:0002101,1.21e-10,1;UBERON:0004709,1.21e-10,1;UBERON:0002529,1.21e-10,1;UBERON:0010538,1.21e-10,1;UBERON:0003661,1.21e-10,1;UBERON:0010890,1.21e-10,1;UBERON:0002471,1.21e-10,1;UBERON:0001383,1.21e-10,1;UBERON:0004357,1.21e-10,1;UBERON:0004347,1.21e-10,1;UBERON:0005420,1.21e-10,1;UBERON:0005732,1.21e-10,1;UBERON:0010758,1.21e-10,1;UBERON:0010707,1.21e-10,1;UBERON:0000978,1.21e-10,1;UBERON:0002103,1.21e-10,1;UBERON:0001665,1.21e-10,1;UBERON:0003823,1.21e-10,1;UBERON:0000154,1.21e-10,1;UBERON:0010709,1.21e-10,1;UBERON:0005733,1.21e-10,1;UBERON:0005730,1.21e-10,1 | |||
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|short_description=p44@PDE4D | |||
}} |
Revision as of 15:59, 13 September 2013
Short description: | p44@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_44_at_PDE4D_5end |
Coexpression cluster: | C1762_Basophils_Natural_CD8_heart_Peripheral_CD4_CD14 |
Association with transcript: | 362bp_to_ENST00000358923, NM_001197221, NM_001197222, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.78e-30 | 3 |
pro-NK cell | 3.78e-30 | 3 |
basophil | 2.40e-29 | 3 |
mature alpha-beta T cell | 1.53e-18 | 18 |
alpha-beta T cell | 1.53e-18 | 18 |
immature T cell | 1.53e-18 | 18 |
mature T cell | 1.53e-18 | 18 |
immature alpha-beta T cell | 1.53e-18 | 18 |
CD8-positive, alpha-beta T cell | 3.90e-14 | 11 |
lymphoid lineage restricted progenitor cell | 1.04e-13 | 52 |
single nucleate cell | 1.41e-13 | 3 |
mononuclear cell | 1.41e-13 | 3 |
lymphocyte | 1.99e-13 | 53 |
common lymphoid progenitor | 1.99e-13 | 53 |
leukocyte | 2.99e-13 | 136 |
T cell | 3.03e-13 | 25 |
pro-T cell | 3.03e-13 | 25 |
granulocyte | 2.15e-11 | 8 |
hematopoietic stem cell | 2.81e-10 | 168 |
nongranular leukocyte | 6.36e-10 | 115 |
hematopoietic cell | 1.24e-09 | 177 |
blood cell | 2.00e-08 | 11 |
hematopoietic oligopotent progenitor cell | 7.23e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.23e-08 | 161 |
CD4-positive, alpha-beta T cell | 3.68e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.