FFCP PHASE1:Hg19::chr5:125695805..125695848,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24911|TSSclassifier=S|UniProt=B7Z6D8|association_with_transcript=0bp_to_ENST00000513040_5end|coexpression_cluster_id=C34|description=CAGE_peak_10_at_GRAMD3_5end|id=chr5:125695805..125695848,+|ontology_enrichment_celltype=CL:0002541!2.53e-10!3;CL:0000453!7.75e-10!5;CL:0000197!6.71e-08!6;CL:0000098!6.71e-08!6;CL:0002167!6.71e-08!6;CL:0000039!9.62e-07!7;CL:0000586!9.62e-07!7|ontology_enrichment_celltype_v019=CL:0002541;1.35e-26;3!CL:0000453;1.74e-15;5!CL:0000349;5.31e-11;19!CL:0000990;7.65e-09;8!CL:0000451;2.55e-07;10|ontology_enrichment_celltype_v019_2=CL:0002541,1.35e-26,3;CL:0000453,1.74e-15,5;CL:0000349,5.31e-11,19;CL:0000990,7.65e-09,8;CL:0000451,2.55e-07,10|ontology_enrichment_development_v019=UBERON:0003124;3.74e-10;1|ontology_enrichment_disease=DOID:2394!1.72e-08!14|ontology_enrichment_disease_v019=DOID:3371;1.62e-09;1!DOID:4549;1.62e-09;1!DOID:5861;1.62e-09;1!DOID:6496;1.62e-09;1!DOID:3571;2.36e-09;1|ontology_enrichment_disease_v019_2=DOID:3371,1.36e-09,1;DOID:4549,1.36e-09,1;DOID:5861,1.36e-09,1;DOID:6496,1.36e-09,1;DOID:3571,2.67e-09,1|ontology_enrichment_uberon=UBERON:0005631!1.54e-12!14;UBERON:0000158!1.54e-12!14;UBERON:0000476!2.53e-10!3;UBERON:0000920!2.53e-10!3;UBERON:0002118!8.42e-09!5;UBERON:0004532!8.42e-09!5;UBERON:0000478!2.32e-08!24;UBERON:0003124!1.64e-07!7|ontology_enrichment_uberon_v019=UBERON:0003124;1.35e-26;3!UBERON:0000920;1.35e-26;3!UBERON:0005631;5.18e-21;10!UBERON:0000158;5.18e-21;10!UBERON:0000478;2.61e-12;24!UBERON:0001282;8.17e-10;1!UBERON:0009842;8.17e-10;1!UBERON:0003704;8.17e-10;1!UBERON:0001171;8.17e-10;1!UBERON:0001172;8.17e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.35e-26,3;UBERON:0005631,2.05e-21,14;UBERON:0000158,2.05e-21,14;UBERON:0003124,4.17e-20,7;UBERON:0000478,2.61e-12,24;UBERON:0001282,8.17e-10,1;UBERON:0009842,8.17e-10,1;UBERON:0003704,8.17e-10,1;UBERON:0001171,8.17e-10,1;UBERON:0001172,8.17e-10,1|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,1.31883489114227,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,2.36553622550902,2.81139395982512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.390309644033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5129700105071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60863923912607,0.922255617552241,2.15418346583453,7.49666866261856,28.3911032161408,12.4572727026533,43.1758168575094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,5.09838797021595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,2.82419605412801,0,0,0,0,0,0.561111741760736,0,0,0,0,0,10.2278906571586,0,0,0,0,0,1.44475294950759,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,4.72445172258151,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,14.14220580819,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,0.389720617678777,3.32162100783408,2.45348091383766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63921658018096,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.0898469141816,0,0,0,0,0.590969204419841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853818767021724,0,0,0,0,0,0,0,0|short_description=p10@GRAMD3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=S | |||
|UniProt=B7Z6D8 | |||
|association_with_transcript=0bp_to_ENST00000513040_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_10_at_GRAMD3_5end | |||
|id=chr5:125695805..125695848,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.53e-10!3;CL:0000453!7.75e-10!5;CL:0000197!6.71e-08!6;CL:0000098!6.71e-08!6;CL:0002167!6.71e-08!6;CL:0000039!9.62e-07!7;CL:0000586!9.62e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.35e-26;3!CL:0000453;1.74e-15;5!CL:0000349;5.31e-11;19!CL:0000990;7.65e-09;8!CL:0000451;2.55e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.35e-26,3;CL:0000453,1.74e-15,5;CL:0000349,5.31e-11,19;CL:0000990,7.65e-09,8;CL:0000451,2.55e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.74e-10;1 | |||
|ontology_enrichment_disease=DOID:2394!1.72e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.62e-09;1!DOID:4549;1.62e-09;1!DOID:5861;1.62e-09;1!DOID:6496;1.62e-09;1!DOID:3571;2.36e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.36e-09,1;DOID:4549,1.36e-09,1;DOID:5861,1.36e-09,1;DOID:6496,1.36e-09,1;DOID:3571,2.67e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.54e-12!14;UBERON:0000158!1.54e-12!14;UBERON:0000476!2.53e-10!3;UBERON:0000920!2.53e-10!3;UBERON:0002118!8.42e-09!5;UBERON:0004532!8.42e-09!5;UBERON:0000478!2.32e-08!24;UBERON:0003124!1.64e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.35e-26;3!UBERON:0000920;1.35e-26;3!UBERON:0005631;5.18e-21;10!UBERON:0000158;5.18e-21;10!UBERON:0000478;2.61e-12;24!UBERON:0001282;8.17e-10;1!UBERON:0009842;8.17e-10;1!UBERON:0003704;8.17e-10;1!UBERON:0001171;8.17e-10;1!UBERON:0001172;8.17e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.35e-26,3;UBERON:0005631,2.05e-21,14;UBERON:0000158,2.05e-21,14;UBERON:0003124,4.17e-20,7;UBERON:0000478,2.61e-12,24;UBERON:0001282,8.17e-10,1;UBERON:0009842,8.17e-10,1;UBERON:0003704,8.17e-10,1;UBERON:0001171,8.17e-10,1;UBERON:0001172,8.17e-10,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,1.31883489114227,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,2.36553622550902,2.81139395982512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.390309644033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5129700105071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60863923912607,0.922255617552241,2.15418346583453,7.49666866261856,28.3911032161408,12.4572727026533,43.1758168575094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,5.09838797021595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,2.82419605412801,0,0,0,0,0,0.561111741760736,0,0,0,0,0,10.2278906571586,0,0,0,0,0,1.44475294950759,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,4.72445172258151,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,14.14220580819,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,0.389720617678777,3.32162100783408,2.45348091383766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63921658018096,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.0898469141816,0,0,0,0,0.590969204419841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853818767021724,0,0,0,0,0,0,0,0 | |||
|short_description=p10@GRAMD3 | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p10@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_GRAMD3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000513040_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z6D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.35e-26 | 3 |
Langerhans cell | 1.74e-15 | 5 |
extraembryonic cell | 5.31e-11 | 19 |
conventional dendritic cell | 7.65e-09 | 8 |
dendritic cell | 2.55e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.35e-26 | 3 |
extraembryonic membrane | 2.05e-21 | 14 |
membranous layer | 2.05e-21 | 14 |
chorion | 4.17e-20 | 7 |
extraembryonic structure | 2.61e-12 | 24 |
intralobular bile duct | 8.17e-10 | 1 |
acinus | 8.17e-10 | 1 |
intrahepatic bile duct | 8.17e-10 | 1 |
portal lobule | 8.17e-10 | 1 |
hepatic acinus | 8.17e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.36e-09 | 1 |
extraosseous chondrosarcoma | 1.36e-09 | 1 |
myxoid chondrosarcoma | 1.36e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 1.36e-09 | 1 |
liver cancer | 2.67e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.