FFCP PHASE1:Hg19::chr5:156693092..156693150,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13760 | |||
|TSSclassifier=S | |||
|UniProt=E5RFQ0,E7EVJ5,E7EW33,E5RKA3 | |||
|association_with_transcript=0bp_to_ENST00000519002,ENST00000519252,ENST00000521420,ENST00000522463,ENST00000522637,ENST00000523119_5end | |||
|coexpression_cluster_id=C1402 | |||
|description=CAGE_peak_1_at_CYFIP2_5end | |||
|id=chr5:156693092..156693150,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.83e-21!140;CL:0000542!1.04e-20!53;CL:0000051!1.04e-20!53;CL:0000838!2.55e-20!52;CL:0000037!1.83e-16!172;CL:0000566!1.83e-16!172;CL:0000988!3.69e-16!182;CL:0002087!2.33e-15!119;CL:0002032!4.95e-14!165;CL:0000837!4.95e-14!165;CL:0002031!9.19e-13!124;CL:0000084!1.48e-11!25;CL:0000827!1.48e-11!25;CL:0000791!6.09e-10!18;CL:0000789!6.09e-10!18;CL:0002420!6.09e-10!18;CL:0002419!6.09e-10!18;CL:0000790!6.09e-10!18;CL:0000945!1.47e-08!24;CL:0000826!1.47e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.97e-12;53!CL:0000084;1.45e-11;25!CL:0000791;5.81e-10;18!CL:0000789;5.81e-10;18!CL:0002419;5.81e-10;18!CL:0000945;1.47e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.51e-22,136;CL:0000542,9.51e-21,53;CL:0000051,9.51e-21,53;CL:0000838,2.35e-20,52;CL:0000037,6.10e-18,168;CL:0000988,1.42e-17,177;CL:0002087,5.34e-17,115;CL:0002032,2.14e-15,161;CL:0000837,2.14e-15,161;CL:0002031,3.59e-14,120;CL:0000084,1.42e-11,25;CL:0000827,1.42e-11,25;CL:0000791,5.86e-10,18;CL:0000789,5.86e-10,18;CL:0002420,5.86e-10,18;CL:0002419,5.86e-10,18;CL:0000790,5.86e-10,18;CL:0000945,1.42e-08,24;CL:0000826,1.42e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-12;53!CL:0000790;5.81e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@CYFIP2 | |||
}} |
Revision as of 14:24, 13 September 2013
Short description: | p1@CYFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CYFIP2_5end |
Coexpression cluster: | C1402_hippocampus_occipital_medial_pineal_temporal_parietal_amygdala |
Association with transcript: | 0bp_to_ENST00000519002, ENST00000519252, ENST00000521420, ENST00000522463, ENST00000522637, ENST00000523119_5end |
EntrezGene: | CYFIP2 |
HGNC: | 13760 |
UniProt: | E5RFQ0E7EVJ5E7EW33E5RKA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.51e-22 | 136 |
lymphocyte | 9.51e-21 | 53 |
common lymphoid progenitor | 9.51e-21 | 53 |
lymphoid lineage restricted progenitor cell | 2.35e-20 | 52 |
hematopoietic stem cell | 6.10e-18 | 168 |
hematopoietic cell | 1.42e-17 | 177 |
nongranular leukocyte | 5.34e-17 | 115 |
hematopoietic oligopotent progenitor cell | 2.14e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 3.59e-14 | 120 |
T cell | 1.42e-11 | 25 |
pro-T cell | 1.42e-11 | 25 |
mature alpha-beta T cell | 5.86e-10 | 18 |
alpha-beta T cell | 5.86e-10 | 18 |
immature T cell | 5.86e-10 | 18 |
mature T cell | 5.86e-10 | 18 |
immature alpha-beta T cell | 5.86e-10 | 18 |
lymphocyte of B lineage | 1.42e-08 | 24 |
pro-B cell | 1.42e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.51e-28 | 56 |
neural rod | 7.51e-28 | 56 |
future spinal cord | 7.51e-28 | 56 |
neural keel | 7.51e-28 | 56 |
regional part of nervous system | 7.00e-27 | 53 |
regional part of brain | 7.00e-27 | 53 |
central nervous system | 1.47e-24 | 81 |
nervous system | 1.85e-24 | 89 |
regional part of forebrain | 1.33e-23 | 41 |
forebrain | 1.33e-23 | 41 |
anterior neural tube | 1.33e-23 | 41 |
future forebrain | 1.33e-23 | 41 |
neurectoderm | 2.07e-23 | 86 |
adult organism | 2.62e-23 | 114 |
neural plate | 4.10e-23 | 82 |
presumptive neural plate | 4.10e-23 | 82 |
brain | 8.30e-22 | 68 |
future brain | 8.30e-22 | 68 |
pre-chordal neural plate | 2.09e-20 | 61 |
brain grey matter | 5.83e-20 | 34 |
gray matter | 5.83e-20 | 34 |
telencephalon | 6.35e-20 | 34 |
cerebral hemisphere | 1.52e-19 | 32 |
regional part of telencephalon | 5.26e-19 | 32 |
cerebral cortex | 1.50e-15 | 25 |
pallium | 1.50e-15 | 25 |
regional part of cerebral cortex | 1.85e-15 | 22 |
neocortex | 3.93e-14 | 20 |
ecto-epithelium | 6.56e-14 | 104 |
ectoderm-derived structure | 7.43e-09 | 171 |
ectoderm | 7.43e-09 | 171 |
presumptive ectoderm | 7.43e-09 | 171 |
structure with developmental contribution from neural crest | 1.45e-08 | 132 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.