FFCP PHASE1:Hg19::chr6:46459112..46459132,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10231|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3041|TSSclassifier=S|UniProt=|association_with_transcript=-13bp_to_ENST00000371374_5end|coexpression_cluster_id=C1510|description=CAGE_peak_4_at_RCAN2_5end|id=chr6:46459112..46459132,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.63e-13;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.61e-59!115;UBERON:0001049!5.12e-27!57;UBERON:0005068!5.12e-27!57;UBERON:0006241!5.12e-27!57;UBERON:0007135!5.12e-27!57;UBERON:0002616!8.26e-24!59;UBERON:0000955!4.87e-23!69;UBERON:0006238!4.87e-23!69;UBERON:0005743!1.41e-22!86;UBERON:0003075!1.48e-22!86;UBERON:0007284!1.48e-22!86;UBERON:0003080!9.36e-22!42;UBERON:0001017!1.38e-21!82;UBERON:0002780!3.94e-21!41;UBERON:0001890!3.94e-21!41;UBERON:0006240!3.94e-21!41;UBERON:0002346!2.05e-20!90;UBERON:0000073!8.40e-20!94;UBERON:0001016!8.40e-20!94;UBERON:0000153!4.94e-19!129;UBERON:0007811!4.94e-19!129;UBERON:0000033!1.56e-18!123;UBERON:0001893!3.71e-17!34;UBERON:0002020!5.33e-17!34;UBERON:0003528!5.33e-17!34;UBERON:0003056!1.37e-16!61;UBERON:0002791!2.27e-16!33;UBERON:0001869!3.88e-16!32;UBERON:0000475!2.27e-14!365;UBERON:0001950!4.53e-14!20;UBERON:0002619!1.73e-13!22;UBERON:0004121!5.18e-12!169;UBERON:0000956!1.17e-11!25;UBERON:0000203!1.17e-11!25;UBERON:0000062!3.76e-11!511;UBERON:0000924!4.13e-11!173;UBERON:0006601!4.13e-11!173;UBERON:0000481!3.37e-10!347;UBERON:0000477!9.47e-10!286;UBERON:0000468!4.24e-09!659;UBERON:0000064!7.64e-09!219;UBERON:0004111!8.28e-09!241;UBERON:0002308!5.60e-07!9;UBERON:0000125!5.60e-07!9;UBERON:0002420!6.32e-07!9;UBERON:0007245!6.32e-07!9;UBERON:0010009!6.32e-07!9;UBERON:0010011!6.32e-07!9;UBERON:0000454!6.32e-07!9|ontology_enrichment_uberon_v019=UBERON:0007023;7.43e-21;114!UBERON:0001893;1.56e-19;34!UBERON:0002780;4.30e-19;41!UBERON:0001890;4.30e-19;41!UBERON:0001869;7.57e-19;32!UBERON:0003528;1.05e-18;34!UBERON:0002020;1.05e-18;34!UBERON:0002791;1.77e-18;32!UBERON:0001950;1.23e-17;20!UBERON:0000073;1.25e-17;53!UBERON:0002616;1.25e-17;53!UBERON:0002619;3.02e-17;22!UBERON:0000956;1.75e-14;25!UBERON:0000203;1.75e-14;25!UBERON:0000955;1.15e-12;68!UBERON:0001017;1.93e-12;75!UBERON:0001016;9.84e-10;83!UBERON:0000125;1.68e-09;9!UBERON:0002308;1.68e-09;9!UBERON:0002420;2.12e-09;9!UBERON:0007245;2.12e-09;9!UBERON:0010009;2.12e-09;9!UBERON:0010011;2.12e-09;9!UBERON:0000454;2.12e-09;9!UBERON:0000200;1.13e-08;6!UBERON:0009663;8.22e-08;7!UBERON:0004732;1.66e-07;13!UBERON:0011216;8.34e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.54e-83,114;UBERON:0001049,5.44e-33,56;UBERON:0005068,5.44e-33,56;UBERON:0006241,5.44e-33,56;UBERON:0007135,5.44e-33,56;UBERON:0000073,2.78e-32,53;UBERON:0002616,2.78e-32,53;UBERON:0003075,4.79e-28,82;UBERON:0007284,4.79e-28,82;UBERON:0000955,5.51e-27,68;UBERON:0006238,5.51e-27,68;UBERON:0002780,6.54e-27,41;UBERON:0001890,6.54e-27,41;UBERON:0003080,6.54e-27,41;UBERON:0006240,6.54e-27,41;UBERON:0002346,6.53e-26,86;UBERON:0001017,2.89e-25,81;UBERON:0001893,2.04e-22,34;UBERON:0001016,3.04e-22,89;UBERON:0003528,3.40e-22,34;UBERON:0002020,3.40e-22,34;UBERON:0010314,5.30e-22,132;UBERON:0001869,6.35e-21,32;UBERON:0002791,1.66e-20,32;UBERON:0010371,3.09e-20,104;UBERON:0003056,5.76e-19,61;UBERON:0011216,1.02e-17,223;UBERON:0001950,1.25e-17,20;UBERON:0002619,3.18e-17,22;UBERON:0000956,1.83e-14,25;UBERON:0000203,1.83e-14,25;UBERON:0004121,2.77e-13,171;UBERON:0000924,2.77e-13,171;UBERON:0006601,2.77e-13,171;UBERON:0004111,3.07e-10,240;UBERON:0000025,8.36e-10,192;UBERON:0000125,1.47e-09,9;UBERON:0002308,1.47e-09,9;UBERON:0002420,1.76e-09,9;UBERON:0007245,1.76e-09,9;UBERON:0010009,1.76e-09,9;UBERON:0010011,1.76e-09,9;UBERON:0000454,1.76e-09,9;UBERON:0000200,1.20e-08,6;UBERON:0009663,7.25e-08,7;UBERON:0004732,1.68e-07,13;UBERON:0003076,2.11e-07,15;UBERON:0003057,2.11e-07,15|phase1_expression=4.54195948176392,1.92690471501885,2.53717927372748,5.00366491765652,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,0,0,1.8564952944007,3.31397375727916,0,0,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,5.51471701699479,1.44846518960824,0,0.486634870302636,0,0,0.43917392846563,4.12584087817795,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0.258416759169329,1.06729878806013,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,1.68203280042692,0,0,0,0,0,0.605429710579726,0,0.234321431833797,0.312160076830321,0.570471821544449,0.448346041655403,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0.494533858557114,0.9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3041 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENST00000371374_5end | |||
|coexpression_cluster_id=C1510 | |||
|description=CAGE_peak_4_at_RCAN2_5end | |||
|id=chr6:46459112..46459132,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.63e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;7.43e-21;114!UBERON:0001893;1.56e-19;34!UBERON:0002780;4.30e-19;41!UBERON:0001890;4.30e-19;41!UBERON:0001869;7.57e-19;32!UBERON:0003528;1.05e-18;34!UBERON:0002020;1.05e-18;34!UBERON:0002791;1.77e-18;32!UBERON:0001950;1.23e-17;20!UBERON:0000073;1.25e-17;53!UBERON:0002616;1.25e-17;53!UBERON:0002619;3.02e-17;22!UBERON:0000956;1.75e-14;25!UBERON:0000203;1.75e-14;25!UBERON:0000955;1.15e-12;68!UBERON:0001017;1.93e-12;75!UBERON:0001016;9.84e-10;83!UBERON:0000125;1.68e-09;9!UBERON:0002308;1.68e-09;9!UBERON:0002420;2.12e-09;9!UBERON:0007245;2.12e-09;9!UBERON:0010009;2.12e-09;9!UBERON:0010011;2.12e-09;9!UBERON:0000454;2.12e-09;9!UBERON:0000200;1.13e-08;6!UBERON:0009663;8.22e-08;7!UBERON:0004732;1.66e-07;13!UBERON:0011216;8.34e-07;132 | |||
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| |||
|short_description=p4@RCAN2 | |||
}} |
Revision as of 21:16, 13 September 2013
Short description: | p4@RCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RCAN2_5end |
Coexpression cluster: | C1510_heart_left_aorta_retina_penis_cerebral_nucleus |
Association with transcript: | -13bp_to_ENST00000371374_5end |
EntrezGene: | RCAN2 |
HGNC: | 3041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.