FFCP PHASE1:Hg19::chr6:48078977..48078989,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=442213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=21345|TSSclassifier=W|UniProt=|association_with_transcript=-34bp_to_uc011dwn.1_5end|coexpression_cluster_id=C184|description=CAGE_peak_5_at_C6orf138_5end|id=chr6:48078977..48078989,-|ontology_enrichment_celltype=CL:0000222!1.02e-07!119;CL:0002321!4.61e-07!248;CL:0002139!7.22e-07!24;CL:0000220!8.18e-07!246;CL:0000359!9.41e-07!32|ontology_enrichment_celltype_v019=CL:0002138;9.60e-16;6!CL:0000167;8.61e-12;1!CL:0000164;8.61e-12;1!CL:0000502;8.61e-12;1!CL:0000172;8.61e-12;1!CL:0000173;8.61e-12;1!CL:0002581;3.28e-11;1!CL:0000182;5.83e-08;12!CL:0002139;6.72e-07;24|ontology_enrichment_celltype_v019_2=CL:0005020,1.30e-15,6;CL:0002138,1.30e-15,6;CL:0005022,1.30e-15,6;CL:0000167,8.62e-12,1;CL:0000164,8.62e-12,1;CL:0000502,8.62e-12,1;CL:0000172,8.62e-12,1;CL:0000173,8.62e-12,1;CL:0002351,8.62e-12,1;CL:0002581,2.96e-11,1;CL:0000182,5.97e-08,12;CL:0000213,9.85e-08,58;CL:0000215,9.85e-08,58;CL:0002139,6.94e-07,24|ontology_enrichment_development_v019=CL:0005022;9.60e-16;6!CL:0002351;8.61e-12;1!UBERON:0004161;1.22e-08;11!UBERON:0009497;2.19e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;8.61e-12;1!DOID:169;7.56e-08;6!DOID:3095;1.07e-07;22!DOID:2994;1.07e-07;22|ontology_enrichment_disease_v019_2=DOID:4430,8.62e-12,1;DOID:169,7.57e-08,6;DOID:3095,1.07e-07,22;DOID:2994,1.07e-07,22|ontology_enrichment_uberon=UBERON:0002049!6.74e-13!79;UBERON:0007798!6.74e-13!79;UBERON:0000055!5.12e-11!69;UBERON:0001981!2.78e-09!60;UBERON:0007500!2.78e-09!60;UBERON:0004537!2.78e-09!60;UBERON:0006965!2.78e-09!60;UBERON:0004535!4.92e-09!110;UBERON:0001009!1.59e-08!113;UBERON:0004872!1.75e-08!84|ontology_enrichment_uberon_v019=UBERON:0001473;5.93e-12;8!UBERON:0004536;5.93e-12;8!UBERON:0006558;5.93e-12;8!UBERON:0002426;3.28e-11;1!UBERON:0003831;3.28e-11;1!UBERON:0003898;3.28e-11;1!UBERON:0004830;3.28e-11;1!UBERON:0003830;3.28e-11;1!UBERON:0005175;3.28e-11;1!UBERON:0001774;3.28e-11;1!UBERON:0001103;3.28e-11;1!UBERON:0002465;1.14e-09;10|ontology_enrichment_uberon_v019_2=UBERON:0001473,7.42e-12,8;UBERON:0004536,7.42e-12,8;UBERON:0006558,7.42e-12,8;UBERON:0002426,2.42e-11,1;UBERON:0003831,2.42e-11,1;UBERON:0003898,2.42e-11,1;UBERON:0004830,2.42e-11,1;UBERON:0003830,2.42e-11,1;UBERON:0005175,2.42e-11,1;UBERON:0001774,2.42e-11,1;UBERON:0001103,2.42e-11,1;UBERON:0010084,2.42e-11,1;UBERON:0002465,1.36e-09,10;UBERON:0002368,6.99e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,2.13459757612026,2.34304428935269,1.61131726843659,0.760272105718513,0.976248230192678,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.515281080091258,0,0,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0.117408694235822,1.01056513432752,0.925971025153221,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0,0.799783929456456,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0.4111257739402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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=442213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21345 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_uc011dwn.1_5end | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_5_at_C6orf138_5end | |||
|id=chr6:48078977..48078989,- | |||
|ontology_enrichment_celltype=CL:0000222!1.02e-07!119;CL:0002321!4.61e-07!248;CL:0002139!7.22e-07!24;CL:0000220!8.18e-07!246;CL:0000359!9.41e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002138;9.60e-16;6!CL:0000167;8.61e-12;1!CL:0000164;8.61e-12;1!CL:0000502;8.61e-12;1!CL:0000172;8.61e-12;1!CL:0000173;8.61e-12;1!CL:0002581;3.28e-11;1!CL:0000182;5.83e-08;12!CL:0002139;6.72e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.30e-15,6;CL:0002138,1.30e-15,6;CL:0005022,1.30e-15,6;CL:0000167,8.62e-12,1;CL:0000164,8.62e-12,1;CL:0000502,8.62e-12,1;CL:0000172,8.62e-12,1;CL:0000173,8.62e-12,1;CL:0002351,8.62e-12,1;CL:0002581,2.96e-11,1;CL:0000182,5.97e-08,12;CL:0000213,9.85e-08,58;CL:0000215,9.85e-08,58;CL:0002139,6.94e-07,24 | |||
|ontology_enrichment_development_v019=CL:0005022;9.60e-16;6!CL:0002351;8.61e-12;1!UBERON:0004161;1.22e-08;11!UBERON:0009497;2.19e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;8.61e-12;1!DOID:169;7.56e-08;6!DOID:3095;1.07e-07;22!DOID:2994;1.07e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,8.62e-12,1;DOID:169,7.57e-08,6;DOID:3095,1.07e-07,22;DOID:2994,1.07e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.74e-13!79;UBERON:0007798!6.74e-13!79;UBERON:0000055!5.12e-11!69;UBERON:0001981!2.78e-09!60;UBERON:0007500!2.78e-09!60;UBERON:0004537!2.78e-09!60;UBERON:0006965!2.78e-09!60;UBERON:0004535!4.92e-09!110;UBERON:0001009!1.59e-08!113;UBERON:0004872!1.75e-08!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.93e-12;8!UBERON:0004536;5.93e-12;8!UBERON:0006558;5.93e-12;8!UBERON:0002426;3.28e-11;1!UBERON:0003831;3.28e-11;1!UBERON:0003898;3.28e-11;1!UBERON:0004830;3.28e-11;1!UBERON:0003830;3.28e-11;1!UBERON:0005175;3.28e-11;1!UBERON:0001774;3.28e-11;1!UBERON:0001103;3.28e-11;1!UBERON:0002465;1.14e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,7.42e-12,8;UBERON:0004536,7.42e-12,8;UBERON:0006558,7.42e-12,8;UBERON:0002426,2.42e-11,1;UBERON:0003831,2.42e-11,1;UBERON:0003898,2.42e-11,1;UBERON:0004830,2.42e-11,1;UBERON:0003830,2.42e-11,1;UBERON:0005175,2.42e-11,1;UBERON:0001774,2.42e-11,1;UBERON:0001103,2.42e-11,1;UBERON:0010084,2.42e-11,1;UBERON:0002465,1.36e-09,10;UBERON:0002368,6.99e-07,35 | |||
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|short_description=p5@C6orf138 | |||
}} |
Revision as of 21:19, 13 September 2013
Short description: | p5@C6orf138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_C6orf138_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | -34bp_to_uc011dwn.1_5end |
EntrezGene: | C6orf138 |
HGNC: | 21345 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.30e-15 | 6 |
endothelial cell of lymphatic vessel | 1.30e-15 | 6 |
vascular lymphangioblast | 1.30e-15 | 6 |
peptide hormone secreting cell | 8.62e-12 | 1 |
enteroendocrine cell | 8.62e-12 | 1 |
type D enteroendocrine cell | 8.62e-12 | 1 |
somatostatin secreting cell | 8.62e-12 | 1 |
pancreatic D cell | 8.62e-12 | 1 |
progenitor cell of endocrine pancreas | 8.62e-12 | 1 |
perirenal preadipocyte | 2.96e-11 | 1 |
hepatocyte | 5.97e-08 | 12 |
lining cell | 9.85e-08 | 58 |
barrier cell | 9.85e-08 | 58 |
endothelial cell of vascular tree | 6.94e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 7.42e-12 | 8 |
lymph vasculature | 7.42e-12 | 8 |
lymphatic part of lymphoid system | 7.42e-12 | 8 |
chest muscle | 2.42e-11 | 1 |
respiratory system muscle | 2.42e-11 | 1 |
skeletal muscle of trunk | 2.42e-11 | 1 |
respiratory system skeletal muscle | 2.42e-11 | 1 |
thoracic segment muscle | 2.42e-11 | 1 |
chest organ | 2.42e-11 | 1 |
muscle of trunk | 2.42e-11 | 1 |
diaphragm | 2.42e-11 | 1 |
future diaphragm | 2.42e-11 | 1 |
lymphoid system | 1.36e-09 | 10 |
endocrine gland | 6.99e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.62e-12 | 1 |
neuroendocrine tumor | 7.57e-08 | 6 |
germ cell and embryonal cancer | 1.07e-07 | 22 |
germ cell cancer | 1.07e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.