FFCP PHASE1:Hg19::chr7:148844516..148844577,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18373 | |||
|TSSclassifier=S | |||
|UniProt=Q8TD17 | |||
|association_with_transcript=0bp_to_ENST00000420008,ENST00000475153,NM_170686,uc003wfl.2_5end | |||
|description=CAGE_peak_1_at_ZNF398_5end | |||
|id=chr7:148844516..148844577,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.50e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.16e-13;41!UBERON:0001890;1.16e-13;41!UBERON:0001893;1.92e-13;34!UBERON:0001869;2.23e-13;32!UBERON:0002791;2.83e-13;32!UBERON:0003528;3.61e-13;34!UBERON:0002020;3.61e-13;34!UBERON:0002619;3.77e-13;22!UBERON:0001950;3.24e-12;20!UBERON:0000073;3.99e-12;53!UBERON:0002616;3.99e-12;53!UBERON:0000956;1.73e-11;25!UBERON:0000203;1.73e-11;25!UBERON:0007023;9.06e-11;114!UBERON:0001017;1.78e-08;75!UBERON:0000955;3.11e-08;68!UBERON:0001016;7.99e-08;83!UBERON:0000922;8.26e-07;49 | |||
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| |||
|short_description=p1@ZNF398 | |||
}} |
Revision as of 23:51, 13 September 2013
Short description: | p1@ZNF398 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZNF398_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420008, ENST00000475153, NM_170686, uc003wfl.2_5end |
EntrezGene: | ZNF398 |
HGNC: | 18373 |
UniProt: | Q8TD17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.64e-38 | 114 |
neural tube | 1.73e-21 | 56 |
neural rod | 1.73e-21 | 56 |
future spinal cord | 1.73e-21 | 56 |
neural keel | 1.73e-21 | 56 |
central nervous system | 1.80e-21 | 81 |
nervous system | 3.73e-20 | 89 |
regional part of nervous system | 3.84e-20 | 53 |
regional part of brain | 3.84e-20 | 53 |
regional part of forebrain | 1.38e-18 | 41 |
forebrain | 1.38e-18 | 41 |
anterior neural tube | 1.38e-18 | 41 |
future forebrain | 1.38e-18 | 41 |
ectoderm-derived structure | 4.70e-16 | 171 |
ectoderm | 4.70e-16 | 171 |
presumptive ectoderm | 4.70e-16 | 171 |
brain | 8.64e-16 | 68 |
future brain | 8.64e-16 | 68 |
telencephalon | 1.02e-15 | 34 |
brain grey matter | 2.80e-15 | 34 |
gray matter | 2.80e-15 | 34 |
cerebral hemisphere | 6.87e-15 | 32 |
regional part of telencephalon | 8.75e-15 | 32 |
neurectoderm | 1.38e-13 | 86 |
regional part of cerebral cortex | 3.96e-13 | 22 |
ecto-epithelium | 4.17e-13 | 104 |
neural plate | 5.36e-13 | 82 |
presumptive neural plate | 5.36e-13 | 82 |
neocortex | 3.48e-12 | 20 |
cerebral cortex | 1.56e-11 | 25 |
pallium | 1.56e-11 | 25 |
pre-chordal neural plate | 5.39e-10 | 61 |
organ system subdivision | 2.10e-09 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.