FFCP PHASE1:Hg19::chr8:128749984..128750033,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4609 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7553 | |||
|TSSclassifier=S | |||
|UniProt=P01106,Q16158 | |||
|association_with_transcript=-475bp_to_AB527619,AB528057,BT019768,DQ894085,S70386_5end | |||
|description=CAGE_peak_4_at_MYC_5end | |||
|id=chr8:128749984..128750033,+ | |||
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|ontology_enrichment_celltype_v019=CL:0000115;1.28e-10;36!CL:0002139;8.09e-10;24!CL:0000359;8.70e-10;32!CL:0000213;1.08e-08;58!CL:0000215;1.08e-08;58!CL:0002078;3.34e-08;45!CL:0000192;5.13e-08;43!CL:1000449;2.03e-07;15!CL:0000071;2.52e-07;18!CL:1000497;6.54e-07;17!CL:0002518;6.54e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.28e-24,121;CL:0002321,7.72e-19,250;CL:0000213,1.57e-14,58;CL:0000215,1.57e-14,58;CL:0000115,3.36e-12,36;CL:0002078,1.03e-11,45;CL:0000066,1.13e-10,253;CL:0000187,1.31e-10,55;CL:0000192,2.24e-10,43;CL:0000514,2.24e-10,43;CL:0000359,3.20e-10,32;CL:0000680,4.27e-10,58;CL:0000056,4.27e-10,58;CL:0000355,4.27e-10,58;CL:0002139,8.19e-10,24;CL:0000076,8.36e-09,63;CL:0000393,2.53e-08,61;CL:0000211,2.53e-08,61;CL:1000449,2.32e-07,15;CL:0000071,2.52e-07,18;CL:0002546,2.52e-07,18;CL:1000497,6.12e-07,17;CL:0002518,6.12e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;5.13e-08;43!CL:0000222;6.97e-08;121!CL:0002546;2.52e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.95e-20!79;UBERON:0007798!2.95e-20!79;UBERON:0000055!8.46e-19!69;UBERON:0003914!5.46e-18!118;UBERON:0004872!1.31e-15!84;UBERON:0004535!3.56e-15!110;UBERON:0001981!5.13e-15!60;UBERON:0007500!5.13e-15!60;UBERON:0004537!5.13e-15!60;UBERON:0006965!5.13e-15!60;UBERON:0001637!7.28e-15!42;UBERON:0003509!7.28e-15!42;UBERON:0004572!7.28e-15!42;UBERON:0001009!6.92e-14!113;UBERON:0002100!2.33e-12!216;UBERON:0004573!2.50e-11!33;UBERON:0004571!2.50e-11!33;UBERON:0000490!1.11e-10!138;UBERON:0005256!4.21e-09!143;UBERON:0000487!5.61e-09!22;UBERON:0006914!1.19e-08!25;UBERON:0001134!1.49e-08!61;UBERON:0002036!1.49e-08!61;UBERON:0003082!1.49e-08!61;UBERON:0000947!2.15e-08!21;UBERON:0010191!2.15e-08!21;UBERON:0003104!2.29e-08!238;UBERON:0009142!2.29e-08!238;UBERON:0000486!2.95e-08!82;UBERON:0004290!4.11e-08!70;UBERON:0002385!4.99e-08!63;UBERON:0001015!4.99e-08!63;UBERON:0000383!4.99e-08!63;UBERON:0000914!1.99e-07!83;UBERON:0002329!1.99e-07!83;UBERON:0003077!1.99e-07!83;UBERON:0003059!1.99e-07!83;UBERON:0007282!1.99e-07!83;UBERON:0009618!1.99e-07!83;UBERON:0007285!1.99e-07!83;UBERON:0004211!2.98e-07!16;UBERON:0001285!2.98e-07!16;UBERON:0007684!2.98e-07!16;UBERON:0003220!2.98e-07!16;UBERON:0004208!2.98e-07!16;UBERON:0001986!4.08e-07!18;UBERON:0004638!4.08e-07!18;UBERON:0004852!4.08e-07!18;UBERON:0009569!6.46e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.09e-11;74!UBERON:0001637;2.65e-11;42!UBERON:0003509;2.65e-11;42!UBERON:0004572;2.65e-11;42!UBERON:0007500;6.90e-11;56!UBERON:0001981;6.90e-11;56!UBERON:0004537;6.90e-11;56!UBERON:0000055;7.15e-11;65!UBERON:0004573;1.01e-10;33!UBERON:0004571;1.01e-10;33!UBERON:0002049;8.73e-10;75!UBERON:0007798;8.73e-10;75!UBERON:0000487;3.34e-09;22!UBERON:0006914;9.30e-09;25!UBERON:0000947;2.66e-08;21!UBERON:0010191;2.66e-08;21!UBERON:0000025;7.52e-08;93!UBERON:0006555;2.03e-07;15!UBERON:0004819;2.03e-07;15!UBERON:0001285;2.03e-07;15!UBERON:0007684;2.03e-07;15!UBERON:0004638;2.52e-07;18!UBERON:0001986;2.52e-07;18!UBERON:0004852;2.52e-07;18 | |||
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| |||
|short_description=p4@MYC | |||
}} |
Revision as of 03:34, 14 September 2013
Short description: | p4@MYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MYC_5end |
Coexpression cluster: | NA |
Association with transcript: | -475bp_to_AB527619, AB528057, BT019768, DQ894085, S70386_5end |
EntrezGene: | MYC |
HGNC: | 7553 |
UniProt: | P01106Q16158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.28e-24 | 121 |
embryonic cell | 7.72e-19 | 250 |
lining cell | 1.57e-14 | 58 |
barrier cell | 1.57e-14 | 58 |
endothelial cell | 3.36e-12 | 36 |
meso-epithelial cell | 1.03e-11 | 45 |
epithelial cell | 1.13e-10 | 253 |
muscle cell | 1.31e-10 | 55 |
smooth muscle cell | 2.24e-10 | 43 |
smooth muscle myoblast | 2.24e-10 | 43 |
vascular associated smooth muscle cell | 3.20e-10 | 32 |
muscle precursor cell | 4.27e-10 | 58 |
myoblast | 4.27e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-10 | 58 |
endothelial cell of vascular tree | 8.19e-10 | 24 |
squamous epithelial cell | 8.36e-09 | 63 |
electrically responsive cell | 2.53e-08 | 61 |
electrically active cell | 2.53e-08 | 61 |
epithelial cell of nephron | 2.32e-07 | 15 |
blood vessel endothelial cell | 2.52e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.52e-07 | 18 |
kidney cell | 6.12e-07 | 17 |
kidney epithelial cell | 6.12e-07 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.