FFCP PHASE1:Hg19::chrX:9734013..9734027,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4935|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20145|TSSclassifier=S|UniProt=P51810|association_with_transcript=-8bp_to_ENST00000380929,NM_000273_5end|coexpression_cluster_id=C58|description=CAGE_peak_5_at_GPR143_5end|id=chrX:9734013..9734027,-|ontology_enrichment_celltype=CL:0000147!5.39e-25!14;CL:0000148!2.64e-21!10;CL:0000541!2.64e-21!10;CL:0002543!4.38e-12!6;CL:0002322!5.99e-11!5;CL:0000149!1.50e-09!4;CL:0000710!2.54e-09!20;CL:0000075!4.15e-09!27;CL:0002567!7.69e-08!3;CL:0002586!1.39e-07!3;CL:1000507!1.81e-07!12;CL:1000494!1.81e-07!12;CL:0000349!5.40e-07!3;CL:0002577!5.40e-07!3|ontology_enrichment_celltype_v019=CL:0000147;4.78e-67;14!CL:0000148;4.66e-56;10!CL:0002322;2.36e-27;5!CL:0000710;3.98e-27;20!CL:0000075;1.19e-23;27!CL:0000149;2.25e-23;4!CL:0002567;1.05e-18;3!CL:0002586;5.62e-18;3!CL:0002077;1.21e-13;34!CL:0002543;4.77e-09;6!CL:0002321;5.34e-09;15!CL:0002566;5.06e-07;1|ontology_enrichment_celltype_v019_2=CL:0000147,8.45e-67,14;CL:0000148,9.34e-56,10;CL:0000541,9.34e-56,10;CL:0002322,3.22e-27,5;CL:0000710,5.58e-27,20;CL:0000075,1.88e-23,27;CL:0000149,2.19e-23,4;CL:0002567,1.02e-18,3;CL:0002586,5.17e-18,3;CL:0002077,4.10e-15,34;CL:0000333,1.45e-11,41;CL:0002543,4.91e-09,6;CL:0000066,8.99e-08,253;CL:0000133,1.27e-07,59;CL:0002566,5.37e-07,1|ontology_enrichment_development_v019=UBERON:0000358;5.06e-07;1|ontology_enrichment_disease=DOID:2394!5.06e-08!14|ontology_enrichment_disease_v019=DOID:1909;2.22e-12;2|ontology_enrichment_disease_v019_2=DOID:1909,1.25e-12,2|ontology_enrichment_uberon=UBERON:0005743!9.25e-18!86;UBERON:0000073!3.51e-15!94;UBERON:0001016!3.51e-15!94;UBERON:0001017!1.18e-13!82;UBERON:0003075!2.13e-12!86;UBERON:0007284!2.13e-12!86;UBERON:0007023!2.39e-12!115;UBERON:0001049!3.83e-12!57;UBERON:0005068!3.83e-12!57;UBERON:0006241!3.83e-12!57;UBERON:0007135!3.83e-12!57;UBERON:0002616!1.60e-11!59;UBERON:0002346!1.72e-11!90;UBERON:0000955!9.96e-11!69;UBERON:0006238!9.96e-11!69;UBERON:0002298!1.25e-10!8;UBERON:0002780!1.01e-08!41;UBERON:0001890!1.01e-08!41;UBERON:0006240!1.01e-08!41;UBERON:0002020!1.34e-08!34;UBERON:0003528!1.34e-08!34;UBERON:0003080!2.00e-08!42;UBERON:0003056!2.59e-08!61;UBERON:0002119!2.59e-08!4;UBERON:0004531!2.59e-08!4;UBERON:0001987!3.45e-08!4;UBERON:0004340!3.45e-08!4;UBERON:0004121!3.86e-08!169;UBERON:0001638!9.55e-08!9;UBERON:0003920!9.55e-08!9;UBERON:0004582!9.55e-08!9;UBERON:0000924!9.87e-08!173;UBERON:0006601!9.87e-08!173;UBERON:0001781!1.39e-07!3;UBERON:0001782!1.39e-07!3;UBERON:0005424!1.39e-07!3;UBERON:0000966!1.43e-07!5;UBERON:0005388!1.43e-07!5;UBERON:0001802!1.43e-07!5;UBERON:0009773!1.81e-07!12;UBERON:0001231!1.81e-07!12;UBERON:0004810!1.81e-07!12;UBERON:0001893!2.22e-07!34;UBERON:0000033!5.95e-07!123;UBERON:0001869!6.78e-07!32;UBERON:0000153!7.51e-07!129;UBERON:0007811!7.51e-07!129;UBERON:0000200!8.65e-07!6|ontology_enrichment_uberon_v019=UBERON:0000966;1.16e-18;5!UBERON:0005388;1.16e-18;5!UBERON:0001802;1.16e-18;5!UBERON:0001781;5.62e-18;3!UBERON:0001782;5.62e-18;3|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.17e-18,3;UBERON:0005424,5.17e-18,3;UBERON:0000966,1.33e-15,6;UBERON:0005388,1.33e-15,6;UBERON:0001802,1.33e-15,6;UBERON:0001781,1.21e-13,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.52908960491121,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535798369704479,0.22452937262617,0.675668882899933,4.5994991239765,2.84779697870439,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.72288698817931,1.39432731443422,1.14027160516907,4.03713361401005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576479813667846,0,2.60341366597893,9.54971063895694,8.20522130470329,6.84289784090821,6.47813204030938,3.00343057843917,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,1.80863626235752,0.871533458600294,1.29964888536674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.693138033939733,0,0,0.527758144464379,0,0,0,0,0.812839312631559,3.01013864312912,1.01950509218015,0,0.671624264166535,0,0,2.82095137628028,4.26419039409617,3.25378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.96933274609521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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4935 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20145 | |||
|TSSclassifier=S | |||
|UniProt=P51810 | |||
|association_with_transcript=-8bp_to_ENST00000380929,NM_000273_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_5_at_GPR143_5end | |||
|id=chrX:9734013..9734027,- | |||
|ontology_enrichment_celltype=CL:0000147!5.39e-25!14;CL:0000148!2.64e-21!10;CL:0000541!2.64e-21!10;CL:0002543!4.38e-12!6;CL:0002322!5.99e-11!5;CL:0000149!1.50e-09!4;CL:0000710!2.54e-09!20;CL:0000075!4.15e-09!27;CL:0002567!7.69e-08!3;CL:0002586!1.39e-07!3;CL:1000507!1.81e-07!12;CL:1000494!1.81e-07!12;CL:0000349!5.40e-07!3;CL:0002577!5.40e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000147;4.78e-67;14!CL:0000148;4.66e-56;10!CL:0002322;2.36e-27;5!CL:0000710;3.98e-27;20!CL:0000075;1.19e-23;27!CL:0000149;2.25e-23;4!CL:0002567;1.05e-18;3!CL:0002586;5.62e-18;3!CL:0002077;1.21e-13;34!CL:0002543;4.77e-09;6!CL:0002321;5.34e-09;15!CL:0002566;5.06e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,8.45e-67,14;CL:0000148,9.34e-56,10;CL:0000541,9.34e-56,10;CL:0002322,3.22e-27,5;CL:0000710,5.58e-27,20;CL:0000075,1.88e-23,27;CL:0000149,2.19e-23,4;CL:0002567,1.02e-18,3;CL:0002586,5.17e-18,3;CL:0002077,4.10e-15,34;CL:0000333,1.45e-11,41;CL:0002543,4.91e-09,6;CL:0000066,8.99e-08,253;CL:0000133,1.27e-07,59;CL:0002566,5.37e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.06e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!5.06e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.22e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.25e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!9.25e-18!86;UBERON:0000073!3.51e-15!94;UBERON:0001016!3.51e-15!94;UBERON:0001017!1.18e-13!82;UBERON:0003075!2.13e-12!86;UBERON:0007284!2.13e-12!86;UBERON:0007023!2.39e-12!115;UBERON:0001049!3.83e-12!57;UBERON:0005068!3.83e-12!57;UBERON:0006241!3.83e-12!57;UBERON:0007135!3.83e-12!57;UBERON:0002616!1.60e-11!59;UBERON:0002346!1.72e-11!90;UBERON:0000955!9.96e-11!69;UBERON:0006238!9.96e-11!69;UBERON:0002298!1.25e-10!8;UBERON:0002780!1.01e-08!41;UBERON:0001890!1.01e-08!41;UBERON:0006240!1.01e-08!41;UBERON:0002020!1.34e-08!34;UBERON:0003528!1.34e-08!34;UBERON:0003080!2.00e-08!42;UBERON:0003056!2.59e-08!61;UBERON:0002119!2.59e-08!4;UBERON:0004531!2.59e-08!4;UBERON:0001987!3.45e-08!4;UBERON:0004340!3.45e-08!4;UBERON:0004121!3.86e-08!169;UBERON:0001638!9.55e-08!9;UBERON:0003920!9.55e-08!9;UBERON:0004582!9.55e-08!9;UBERON:0000924!9.87e-08!173;UBERON:0006601!9.87e-08!173;UBERON:0001781!1.39e-07!3;UBERON:0001782!1.39e-07!3;UBERON:0005424!1.39e-07!3;UBERON:0000966!1.43e-07!5;UBERON:0005388!1.43e-07!5;UBERON:0001802!1.43e-07!5;UBERON:0009773!1.81e-07!12;UBERON:0001231!1.81e-07!12;UBERON:0004810!1.81e-07!12;UBERON:0001893!2.22e-07!34;UBERON:0000033!5.95e-07!123;UBERON:0001869!6.78e-07!32;UBERON:0000153!7.51e-07!129;UBERON:0007811!7.51e-07!129;UBERON:0000200!8.65e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.16e-18;5!UBERON:0005388;1.16e-18;5!UBERON:0001802;1.16e-18;5!UBERON:0001781;5.62e-18;3!UBERON:0001782;5.62e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.17e-18,3;UBERON:0005424,5.17e-18,3;UBERON:0000966,1.33e-15,6;UBERON:0005388,1.33e-15,6;UBERON:0001802,1.33e-15,6;UBERON:0001781,1.21e-13,4 | |||
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|short_description=p5@GPR143 | |||
}} |
Revision as of 12:41, 14 September 2013
Short description: | p5@GPR143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GPR143_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -8bp_to_ENST00000380929, NM_000273_5end |
EntrezGene: | GPR143 |
HGNC: | 20145 |
UniProt: | P51810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 8.45e-67 | 14 |
melanocyte | 9.34e-56 | 10 |
melanoblast | 9.34e-56 | 10 |
embryonic stem cell | 3.22e-27 | 5 |
neurecto-epithelial cell | 5.58e-27 | 20 |
columnar/cuboidal epithelial cell | 1.88e-23 | 27 |
visual pigment cell | 2.19e-23 | 4 |
light melanocyte | 1.02e-18 | 3 |
retinal pigment epithelial cell | 5.17e-18 | 3 |
ecto-epithelial cell | 4.10e-15 | 34 |
migratory neural crest cell | 1.45e-11 | 41 |
vein endothelial cell | 4.91e-09 | 6 |
epithelial cell | 8.99e-08 | 253 |
neurectodermal cell | 1.27e-07 | 59 |
dark melanocyte | 5.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.17e-18 | 3 |
presumptive retinal pigmented epithelium | 5.17e-18 | 3 |
retina | 1.33e-15 | 6 |
photoreceptor array | 1.33e-15 | 6 |
posterior segment of eyeball | 1.33e-15 | 6 |
layer of retina | 1.21e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.25e-12 | 2 |
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