FFCP PHASE1:Hg19::chrX:84499056..84499078,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7552|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13128|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_ENST00000276123_5end|description=CAGE_peak_3_at_ZNF711_5end|id=chrX:84499056..84499078,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002319;4.60e-10;25!CL:0000540;1.98e-08;6!CL:0000404;1.98e-08;6|ontology_enrichment_celltype_v019_2=CL:0000047,1.49e-11,8;CL:0002319,4.00e-10,25;CL:0000540,1.24e-08,6;CL:0000031,1.24e-08,6;CL:0000404,1.24e-08,6;CL:0000133,4.65e-07,59|ontology_enrichment_development_v019=CL:0000031;1.98e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;9.13e-09;10|ontology_enrichment_disease_v019_2=DOID:171,8.07e-09,10|ontology_enrichment_uberon=UBERON:0000073!4.33e-23!94;UBERON:0001016!4.33e-23!94;UBERON:0001017!2.51e-22!82;UBERON:0005743!3.09e-21!86;UBERON:0002346!7.97e-21!90;UBERON:0001049!2.12e-20!57;UBERON:0005068!2.12e-20!57;UBERON:0006241!2.12e-20!57;UBERON:0007135!2.12e-20!57;UBERON:0003075!3.08e-19!86;UBERON:0007284!3.08e-19!86;UBERON:0002780!2.76e-18!41;UBERON:0001890!2.76e-18!41;UBERON:0006240!2.76e-18!41;UBERON:0003080!2.14e-17!42;UBERON:0003056!4.34e-17!61;UBERON:0002616!3.05e-16!59;UBERON:0000924!3.08e-16!173;UBERON:0006601!3.08e-16!173;UBERON:0002020!4.45e-16!34;UBERON:0003528!4.45e-16!34;UBERON:0000955!1.12e-15!69;UBERON:0006238!1.12e-15!69;UBERON:0001869!1.26e-15!32;UBERON:0001893!1.71e-15!34;UBERON:0002791!3.82e-15!33;UBERON:0004121!5.97e-15!169;UBERON:0000956!9.55e-13!25;UBERON:0000203!9.55e-13!25;UBERON:0007023!8.75e-12!115;UBERON:0000153!1.57e-11!129;UBERON:0007811!1.57e-11!129;UBERON:0002619!5.47e-11!22;UBERON:0000033!6.92e-11!123;UBERON:0001950!2.32e-10!20|ontology_enrichment_uberon_v019=UBERON:0001869;1.20e-18;32!UBERON:0002791;2.13e-17;32!UBERON:0003528;5.76e-17;34!UBERON:0002020;5.76e-17;34!UBERON:0001893;1.02e-15;34!UBERON:0000956;2.51e-15;25!UBERON:0000203;2.51e-15;25!UBERON:0002780;1.59e-14;41!UBERON:0001890;1.59e-14;41!UBERON:0002619;2.93e-12;22!UBERON:0001950;3.14e-12;20!UBERON:0001017;4.41e-11;75!UBERON:0001016;7.64e-11;83!UBERON:0000073;2.22e-10;53!UBERON:0002616;2.22e-10;53!UBERON:0000922;4.12e-10;49!UBERON:0000955;8.00e-09;68|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.24e-29,89;UBERON:0001017,1.08e-26,81;UBERON:0001049,4.15e-20,56;UBERON:0005068,4.15e-20,56;UBERON:0006241,4.15e-20,56;UBERON:0007135,4.15e-20,56;UBERON:0002780,5.90e-20,41;UBERON:0001890,5.90e-20,41;UBERON:0003080,5.90e-20,41;UBERON:0006240,5.90e-20,41;UBERON:0001869,1.00e-19,32;UBERON:0002346,3.67e-19,86;UBERON:0003528,1.40e-18,34;UBERON:0002020,1.40e-18,34;UBERON:0002791,3.05e-18,32;UBERON:0001893,3.88e-18,34;UBERON:0000073,2.38e-17,53;UBERON:0002616,2.38e-17,53;UBERON:0003056,3.19e-17,61;UBERON:0004121,3.84e-17,171;UBERON:0000924,3.84e-17,171;UBERON:0006601,3.84e-17,171;UBERON:0003075,4.78e-17,82;UBERON:0007284,4.78e-17,82;UBERON:0000955,3.05e-16,68;UBERON:0006238,3.05e-16,68;UBERON:0000956,4.51e-15,25;UBERON:0000203,4.51e-15,25;UBERON:0010371,1.55e-14,104;UBERON:0001950,5.07e-12,20;UBERON:0002619,5.15e-12,22;UBERON:0011216,9.78e-12,223;UBERON:0010314,1.32e-09,132|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,2.57612388417951,2.46373965131192,2.25976751270645,0.687720651731561,0.821005894499457,0.629686250509434,0,0,0,0,0,0,0,2.70121541726101,3.81680571135301,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,0.587237189370939,1.14681968437569,9.25199300053181,0.560508562981536,2.10707267820062,0,0,0,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0,0,0,0,0,0,0,0,0.593146252648242,0.802622484269139,0,0,0,0,0,0.318565414324097,0,0,0,0,1.24930726552346,0.473554504088034,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0.670700859703636,0.12786256184353,0,0,0,0,0,1.89069634328136,1.77383517970051,2.10803485663503,0.392937226493138,0.364295288292542,0.370784442784429,0.324547393654683,0,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0.81014194788176,0.535798369704479,1.34717623575702,1.35133776579987,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,1.2333377420858,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.587172493218824,0.647491777472526,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.673344455816265,0.750711119231785,0,0,0,0,0,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13128 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000276123_5end | |||
|description=CAGE_peak_3_at_ZNF711_5end | |||
|id=chrX:84499056..84499078,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.60e-10;25!CL:0000540;1.98e-08;6!CL:0000404;1.98e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.49e-11,8;CL:0002319,4.00e-10,25;CL:0000540,1.24e-08,6;CL:0000031,1.24e-08,6;CL:0000404,1.24e-08,6;CL:0000133,4.65e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.98e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;9.13e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.07e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.33e-23!94;UBERON:0001016!4.33e-23!94;UBERON:0001017!2.51e-22!82;UBERON:0005743!3.09e-21!86;UBERON:0002346!7.97e-21!90;UBERON:0001049!2.12e-20!57;UBERON:0005068!2.12e-20!57;UBERON:0006241!2.12e-20!57;UBERON:0007135!2.12e-20!57;UBERON:0003075!3.08e-19!86;UBERON:0007284!3.08e-19!86;UBERON:0002780!2.76e-18!41;UBERON:0001890!2.76e-18!41;UBERON:0006240!2.76e-18!41;UBERON:0003080!2.14e-17!42;UBERON:0003056!4.34e-17!61;UBERON:0002616!3.05e-16!59;UBERON:0000924!3.08e-16!173;UBERON:0006601!3.08e-16!173;UBERON:0002020!4.45e-16!34;UBERON:0003528!4.45e-16!34;UBERON:0000955!1.12e-15!69;UBERON:0006238!1.12e-15!69;UBERON:0001869!1.26e-15!32;UBERON:0001893!1.71e-15!34;UBERON:0002791!3.82e-15!33;UBERON:0004121!5.97e-15!169;UBERON:0000956!9.55e-13!25;UBERON:0000203!9.55e-13!25;UBERON:0007023!8.75e-12!115;UBERON:0000153!1.57e-11!129;UBERON:0007811!1.57e-11!129;UBERON:0002619!5.47e-11!22;UBERON:0000033!6.92e-11!123;UBERON:0001950!2.32e-10!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.20e-18;32!UBERON:0002791;2.13e-17;32!UBERON:0003528;5.76e-17;34!UBERON:0002020;5.76e-17;34!UBERON:0001893;1.02e-15;34!UBERON:0000956;2.51e-15;25!UBERON:0000203;2.51e-15;25!UBERON:0002780;1.59e-14;41!UBERON:0001890;1.59e-14;41!UBERON:0002619;2.93e-12;22!UBERON:0001950;3.14e-12;20!UBERON:0001017;4.41e-11;75!UBERON:0001016;7.64e-11;83!UBERON:0000073;2.22e-10;53!UBERON:0002616;2.22e-10;53!UBERON:0000922;4.12e-10;49!UBERON:0000955;8.00e-09;68 | |||
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| |||
|short_description=p3@ZNF711 | |||
}} |
Revision as of 12:38, 14 September 2013
Short description: | p3@ZNF711 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ZNF711_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000276123_5end |
EntrezGene: | ZNF711 |
HGNC: | 13128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.49e-11 | 8 |
neural cell | 4.00e-10 | 25 |
neuron | 1.24e-08 | 6 |
neuroblast | 1.24e-08 | 6 |
electrically signaling cell | 1.24e-08 | 6 |
neurectodermal cell | 4.65e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.24e-29 | 89 |
central nervous system | 1.08e-26 | 81 |
neural tube | 4.15e-20 | 56 |
neural rod | 4.15e-20 | 56 |
future spinal cord | 4.15e-20 | 56 |
neural keel | 4.15e-20 | 56 |
regional part of forebrain | 5.90e-20 | 41 |
forebrain | 5.90e-20 | 41 |
anterior neural tube | 5.90e-20 | 41 |
future forebrain | 5.90e-20 | 41 |
cerebral hemisphere | 1.00e-19 | 32 |
neurectoderm | 3.67e-19 | 86 |
brain grey matter | 1.40e-18 | 34 |
gray matter | 1.40e-18 | 34 |
regional part of telencephalon | 3.05e-18 | 32 |
telencephalon | 3.88e-18 | 34 |
regional part of nervous system | 2.38e-17 | 53 |
regional part of brain | 2.38e-17 | 53 |
pre-chordal neural plate | 3.19e-17 | 61 |
ectoderm-derived structure | 3.84e-17 | 171 |
ectoderm | 3.84e-17 | 171 |
presumptive ectoderm | 3.84e-17 | 171 |
neural plate | 4.78e-17 | 82 |
presumptive neural plate | 4.78e-17 | 82 |
brain | 3.05e-16 | 68 |
future brain | 3.05e-16 | 68 |
cerebral cortex | 4.51e-15 | 25 |
pallium | 4.51e-15 | 25 |
ecto-epithelium | 1.55e-14 | 104 |
neocortex | 5.07e-12 | 20 |
regional part of cerebral cortex | 5.15e-12 | 22 |
organ system subdivision | 9.78e-12 | 223 |
structure with developmental contribution from neural crest | 1.32e-09 | 132 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.07e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.