FFCP PHASE1:Hg19::chr10:37656774..37656778,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr10:37656774..37656778,+ | |||
|id=chr10:37656774..37656778,+ | |||
|ontology_enrichment_celltype=CL:0000667!4.80e-07!6;CL:0000058!4.80e-07!6;CL:0000138!4.80e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2!CL:0002327;8.82e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,8.82e-14,4;CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1!UBERON:0005062;1.00e-13;4!UBERON:0007284;1.00e-13;4 | |||
|ontology_enrichment_disease=DOID:0060085!1.43e-10!1;DOID:3165!1.43e-10!1;DOID:0060121!1.43e-10!1;DOID:2438!1.43e-10!1;DOID:4418!1.43e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.82e-14;4!DOID:1612;8.82e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.82e-14,4;DOID:1612,8.82e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0002134!7.40e-11!1;UBERON:0005208!7.40e-11!1;UBERON:0005946!7.40e-11!1;UBERON:0005965!7.40e-11!1;UBERON:0002078!7.40e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.42e-50;1!UBERON:0005208;2.42e-50;1!UBERON:0004145;2.42e-50;1!UBERON:0005946;2.42e-50;1!UBERON:0005965;2.42e-50;1!UBERON:0002078;2.42e-50;1!UBERON:0002081;5.56e-26;2!UBERON:0002133;5.56e-26;2!UBERON:0003978;8.00e-18;3!UBERON:0004151;8.00e-18;3!UBERON:0000946;8.00e-18;3!UBERON:0001911;8.82e-14;4!UBERON:0000473;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.42e-50,1;UBERON:0005208,2.42e-50,1;UBERON:0005946,2.42e-50,1;UBERON:0005965,2.42e-50,1;UBERON:0002078,2.42e-50,1;UBERON:0002081,5.56e-26,2;UBERON:0002133,5.56e-26,2;UBERON:0010227,5.56e-26,2;UBERON:0003978,8.00e-18,3;UBERON:0009751,8.00e-18,3;UBERON:0004151,8.00e-18,3;UBERON:0000946,8.00e-18,3;UBERON:0002523,8.00e-18,3;UBERON:0005983,8.00e-18,3;UBERON:0004145,8.00e-18,3;UBERON:0002165,8.00e-18,3;UBERON:0002062,8.00e-18,3;UBERON:0007280,8.00e-18,3;UBERON:0001911,8.82e-14,4;UBERON:0005333,8.82e-14,4;UBERON:0008425,8.82e-14,4;UBERON:0005311,8.82e-14,4;UBERON:0004797,2.03e-08,7;UBERON:0000076,1.49e-07,8;UBERON:0000473,1.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,6.82187999970327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,1.33982065078089,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:37656774..37656778,+ | |||
}} |
Revision as of 02:36, 11 January 2014
Short description: | p@chr10:37656774..37656778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:37656774..37656778, + |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 8.82e-14 | 4 |
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.42e-50 | 1 |
right atrium valve | 2.42e-50 | 1 |
outflow tract of atrium | 2.42e-50 | 1 |
outflow part of right atrium | 2.42e-50 | 1 |
right cardiac atrium | 2.42e-50 | 1 |
cardiac atrium | 5.56e-26 | 2 |
atrioventricular valve | 5.56e-26 | 2 |
future cardiac atrium | 5.56e-26 | 2 |
valve | 8.00e-18 | 3 |
cardiac mesenchyme | 8.00e-18 | 3 |
cardiac chamber | 8.00e-18 | 3 |
cardial valve | 8.00e-18 | 3 |
tunica intima | 8.00e-18 | 3 |
heart layer | 8.00e-18 | 3 |
outflow tract | 8.00e-18 | 3 |
endocardium | 8.00e-18 | 3 |
endocardial cushion | 8.00e-18 | 3 |
presumptive endocardium | 8.00e-18 | 3 |
mammary gland | 8.82e-14 | 4 |
mammary bud | 8.82e-14 | 4 |
mammary ridge | 8.82e-14 | 4 |
mammary placode | 8.82e-14 | 4 |
blood vessel layer | 2.03e-08 | 7 |
external ectoderm | 1.49e-07 | 8 |
testis | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.82e-14 | 4 |
breast cancer | 8.82e-14 | 4 |