FFCP PHASE1:Hg19::chr10:71098164..71098182,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C981 | |||
|description=CAGE_peak_at_chr10:71098164..71098182,+ | |||
|id=chr10:71098164..71098182,+ | |||
|ontology_enrichment_celltype=CL:0002541!8.55e-28!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.95e-99;3!CL:0000039;8.22e-20;7!CL:0000586;8.22e-20;7!CL:0000349;1.94e-16;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.95e-99,3;CL:0000039,7.84e-20,7;CL:0000586,7.84e-20,7;CL:0000349,1.94e-16,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!4.06e-10!1;DOID:10165!4.06e-10!1;DOID:1798!4.06e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.49e-07;22!DOID:2994;5.49e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.40e-07,22;DOID:2994,5.40e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!8.55e-28!3;UBERON:0000920!8.55e-28!3;UBERON:0003124!7.25e-21!7;UBERON:0005631!6.22e-16!14;UBERON:0000158!6.22e-16!14;UBERON:0000478!3.15e-09!24;UBERON:0002046!1.02e-07!5;UBERON:0004117!1.02e-07!5;UBERON:0007689!1.02e-07!5;UBERON:0007123!1.02e-07!5;UBERON:0003091!1.02e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.95e-99;3!UBERON:0000920;7.95e-99;3!UBERON:0005631;2.06e-30;10!UBERON:0000158;2.06e-30;10!UBERON:0000478;3.48e-13;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.95e-99,3;UBERON:0003124,5.22e-43,7;UBERON:0005631,5.39e-22,14;UBERON:0000158,5.39e-22,14;UBERON:0000478,3.48e-13,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38338342632836,5.20594337576678,0,2.23300811812344,3.20591576906518,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:71098164..71098182,+ | |||
}} |
Revision as of 03:16, 11 January 2014
Short description: | p@chr10:71098164..71098182, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:71098164..71098182, + |
Coexpression cluster: | C981_choriocarcinoma_chorionic_pancreatic_placenta_amniotic_vagina_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.95e-99 | 3 |
germ line cell | 7.84e-20 | 7 |
germ cell | 7.84e-20 | 7 |
extraembryonic cell | 1.94e-16 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.95e-99 | 3 |
chorion | 5.22e-43 | 7 |
extraembryonic membrane | 5.39e-22 | 14 |
membranous layer | 5.39e-22 | 14 |
extraembryonic structure | 3.48e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.40e-07 | 22 |
germ cell cancer | 5.40e-07 | 22 |