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FFCP PHASE1:Hg19::chr11:1774731..1774765,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C587|description=CAGE_peak_at_chr11:1774731..1774765,-|id=chr11:1774731..1774765,-|ontology_enrichment_celltype=CL:0000557!3.60e-13!71;CL:0000839!5.32e-13!70;CL:0000766!3.20e-12!76;CL:0002194!9.77e-12!63;CL:0000576!9.77e-12!63;CL:0000040!9.77e-12!63;CL:0000559!9.77e-12!63;CL:0002009!1.83e-11!65;CL:0002057!1.06e-08!42;CL:0000860!2.64e-08!45|ontology_enrichment_celltype_v019=CL:0000473;3.99e-12;39!CL:0000234;3.99e-12;39!CL:0000860;1.02e-09;33!CL:0002057;1.02e-09;33!CL:0000766;4.82e-08;69!CL:0000576;7.39e-08;48|ontology_enrichment_celltype_v019_2=CL:0000557,1.27e-16,67;CL:0000839,2.05e-16,66;CL:0000766,1.66e-15,72;CL:0002194,2.16e-14,59;CL:0000576,2.16e-14,59;CL:0000040,2.16e-14,59;CL:0000559,2.16e-14,59;CL:0002009,4.51e-14,61;CL:0000473,5.08e-14,48;CL:0000234,5.08e-14,48;CL:0000860,5.31e-10,42;CL:0002057,5.31e-10,42|ontology_enrichment_development_v019=CL:0002057;1.10e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.88e-12!115;UBERON:0002371!9.44e-12!80;UBERON:0001474!8.93e-11!86;UBERON:0000926!9.57e-11!448;UBERON:0004120!9.57e-11!448;UBERON:0006603!9.57e-11!448;UBERON:0004765!7.73e-10!101;UBERON:0001434!7.73e-10!101;UBERON:0000468!1.07e-09!659;UBERON:0002204!1.40e-08!167;UBERON:0002193!7.05e-08!112;UBERON:0000467!1.02e-07!625;UBERON:0000480!1.16e-07!626;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102;UBERON:0000062!4.38e-07!511;UBERON:0000922!8.29e-07!612;UBERON:0000923!9.28e-07!604;UBERON:0005291!9.28e-07!604;UBERON:0006598!9.28e-07!604;UBERON:0002532!9.28e-07!604|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-14,76;UBERON:0001474,2.78e-13,82;UBERON:0004765,6.77e-13,90;UBERON:0001434,2.45e-12,100;UBERON:0002405,3.11e-12,93;UBERON:0000926,2.54e-10,315;UBERON:0004120,2.54e-10,315;UBERON:0006603,2.54e-10,315;UBERON:0002193,2.13e-09,108;UBERON:0002390,3.44e-09,98;UBERON:0003061,3.44e-09,98;UBERON:0002204,2.27e-08,167;UBERON:0003081,1.33e-07,203|phase1_expression=2.54349730978779,7.70761886007539,2.67813367782345,9.00659685178174,8.49226079411847,4.36169262050184,5.06599756336621,3.15859936713415,4.70134130759709,0.245733936501509,3.48900583986214,0.218441372130172,1.05506791291381,1.73272894144065,1.65698687863958,0.672325146451775,2.41077811209591,0.730310090387373,0.487932798790507,0.492484232307152,2.85600967741954,0.940364164434263,0.286235987131057,0.958120975510189,0.753255837568817,0,0.0821005894499457,0,1.57345710739562,0.767658796194425,0.309632246632152,0.919421224478927,0.90361775633475,2.58827807116751,0,0,0.293600439334847,1.10799081706375,1.40381113229099,1.73608696572681,8.2848725468772,19.4336199611388,7.98484259665978,6.54292074508041,4.91238726795452,4.60909716256851,6.0431549595478,5.34518254428373,4.02618282163635,4.89077066947656,1.5369642391746,0.47296445977717,3.44745680736619,1.93645405075148,0,9.97684399575805,5.45812300115692,2.24723484445085,6.73384563215986,2.88836124368484,3.19668562899521,5.60747210317417,3.19141852194611,2.55734850319616,7.2552309657146,0.56738522469114,0.622822248995575,4.52247597462138,3.65038042894141,1.73751075764093,3.02699751316684,1.47311054395026,1.89877432464531,1.26753171787165,1.06302149982522,0.209658645508376,1.46027220490444,1.35159203557356,0.32145117339416,0.570025487482497,1.19350006319454,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.445641827540694,0.294605907474837,0,0,0.896639238079726,0.260118695119756,0.822189523018381,1.10540007114339,0.869409257205157,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0,0.506039384039006,0,0,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0.289648807765598,0,1.34140171940727,0.511450247374121,0.722878304769133,2.00535164254356,5.35932120155048,3.9764297352555,3.40644409211845,0.378139268656271,1.33037638477538,0.614843499851882,1.37528029272598,0,1.85392221392215,5.19275829847493,4.87563264437948,10.6366368415092,0.238490624305342,0,0,0.79504962946682,0,0.347140501607594,1.13061588384802,0.419499436209906,1.10047216776027,0.208994966536811,1.03366703667732,0.71153252537342,0,1.61131726843659,0,1.70843440283719,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0.732806975721629,0,0,1.74437620857014,0.496971951695318,1.8994576749687,0.397227542439656,7.17091551872034,2.4826786753885,1.12135520028461,1.06748995729705,11.3467072271894,0,0.404132016209064,0.653847612453835,0.302714855289863,1.72852777344,0,1.87296046098192,0,1.64393548606981,0.117434498643765,0.323745888736263,0,0.408308342509787,0.122834317311768,1.85986406116378,7.12801714369232,5.43987244412825,0.910161361938026,1.43723628363248,0,0.500474079487857,0.554128230968366,0,1.5324389789951,3.15499923703853,0.2268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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C587
|description=CAGE_peak_at_chr11:1774731..1774765,-
|id=chr11:1774731..1774765,-
|ontology_enrichment_celltype=CL:0000557!3.60e-13!71;CL:0000839!5.32e-13!70;CL:0000766!3.20e-12!76;CL:0002194!9.77e-12!63;CL:0000576!9.77e-12!63;CL:0000040!9.77e-12!63;CL:0000559!9.77e-12!63;CL:0002009!1.83e-11!65;CL:0002057!1.06e-08!42;CL:0000860!2.64e-08!45
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|ontology_enrichment_development_v019=CL:0002057;1.10e-07;42
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!2.88e-12!115;UBERON:0002371!9.44e-12!80;UBERON:0001474!8.93e-11!86;UBERON:0000926!9.57e-11!448;UBERON:0004120!9.57e-11!448;UBERON:0006603!9.57e-11!448;UBERON:0004765!7.73e-10!101;UBERON:0001434!7.73e-10!101;UBERON:0000468!1.07e-09!659;UBERON:0002204!1.40e-08!167;UBERON:0002193!7.05e-08!112;UBERON:0000467!1.02e-07!625;UBERON:0000480!1.16e-07!626;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102;UBERON:0000062!4.38e-07!511;UBERON:0000922!8.29e-07!612;UBERON:0000923!9.28e-07!604;UBERON:0005291!9.28e-07!604;UBERON:0006598!9.28e-07!604;UBERON:0002532!9.28e-07!604
|ontology_enrichment_uberon_v019=
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|short_description=p@chr11:1774731..1774765,-
}}

Revision as of 06:01, 11 January 2014

Short description:p@chr11:1774731..1774765, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr11:1774731..1774765, -
Coexpression cluster:C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data