FFCP PHASE1:Hg19::chr11:61100781..61100818,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2717 | |||
|TSSclassifier=strong | |||
|UniProt=Q16531 | |||
|association_with_transcript=19bp_to_ENST00000301764_5end | |||
|description=CAGE_peak_3_at_DDB1_5end | |||
|id=chr11:61100781..61100818,- | |||
|ontology_enrichment_celltype=CL:0002009!2.35e-08!65;CL:0000055!9.94e-08!180;CL:0002194!1.16e-07!63;CL:0000576!1.16e-07!63;CL:0000040!1.16e-07!63;CL:0000559!1.16e-07!63;CL:0000557!8.42e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.17e-08;6!CL:0002567;6.40e-08;3!CL:0000148;7.39e-08;10!CL:0002521;8.41e-08;3!CL:0000473;2.26e-07;39!CL:0000234;2.26e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.89e-09,6;CL:0002567,3.85e-08,3;CL:0000148,3.86e-08,10;CL:0000541,3.86e-08,10;CL:0000136,7.72e-08,15;CL:0002009,8.97e-08,61;CL:0000473,9.84e-08,48;CL:0000234,9.84e-08,48;CL:0002521,1.23e-07,3;CL:0002194,3.38e-07,59;CL:0000576,3.38e-07,59;CL:0000040,3.38e-07,59;CL:0000559,3.38e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.22e-10!167;UBERON:0000468!3.44e-08!659;UBERON:0000467!3.63e-08!625;UBERON:0000480!5.26e-08!626;UBERON:0002371!2.80e-07!80;UBERON:0004765!3.81e-07!101;UBERON:0001434!3.81e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.66e-09;14!UBERON:0002190;8.41e-08;3!UBERON:0002072;1.27e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.09e-09,14;UBERON:0002204,2.57e-08,167;UBERON:0002190,1.23e-07,3;UBERON:0002072,1.45e-07,5;UBERON:0000926,1.64e-07,315;UBERON:0004120,1.64e-07,315;UBERON:0006603,1.64e-07,315 | |||
|phase1_expression=0.54503513781167,0.642301571672949,1.12763523276777,0,1.78784437770915,0,2.53299878168311,1.26343974685366,2.08948502559871,0.737201809504527,0,0,0,0.247532705920093,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0.293600439334847,0,1.40381113229099,0.868043482863407,0.447830948479849,0,1.28787783817093,1.16318591023652,1.51150377475524,0,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,1.0246428261164,0.47296445977717,0.689491361473237,2.5819387343353,2.70852973188684,1.12945403725563,0.818718450173537,1.57306439111559,0.306083892370903,1.60464513538047,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,1.24564449799115,0.502497330513487,0.521482918420201,0.65156653411535,0,1.84138817993782,0.316462387440884,0,0,0.419317291016752,0.336985893439485,0.450530678524519,0.48217676009124,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,1.00267582127178,0.869079113764942,0,0,0.189069634328136,0,0.087834785693126,0.72038491523742,0.364295288292542,0.370784442784429,1.29818957461873,0.348259474598534,0.26591592103773,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,2.38336525463794,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.163461903113459,0.151357427644931,0,0.234321431833797,1.87296046098192,0.570471821544449,0.298897361103602,0.117434498643765,0,0.140450806702248,0.408308342509787,0,0.826606249406124,0,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.831192346452549,0,0.919463387397059,0.901428353439581,0.113432183160021,0.358779271377724,0,1.27159140695737,0.600182192168805,0.618315175430633,0.772921620136887,1.11670113798954,0.506328996723799,0.194874010322397,0,1.47279837827679,0.646584227275248,0.710019185033229,0.806016785821122,0.508681776931463,1.35282597214308,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,1.85747171212792,0.721879481669586,0,0,0,0.220587945464788,0.871517776369625,0.237270619111097,0.134831308160164,0.588664395376038,0.769494313892781,0.738155454624648,0,1.2347220339942,0,0,0,0,0,0.614942192715568,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0,1.47730203652438,1.8720341211139,1.78357394746474,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,1.15014803749563,0,0.176096868026452,0,0.144119953416961,0,0.571481048629521,2.29193055334967,8.20522130470329,1.71072446022705,1.54241239054985,3.00343057843917,1.42913216315289,0,0,0,0.258543431515556,0,1.690605505112,0.797814349754612,1.04007436911366,0.771622122786426,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0,0,0.871533458600294,0.199945982364114,1.2162378064119,1.50677127429638,0,0.479249710983165,0,1.42636905040718,0.434343920002738,0.61642896765115,0.895304816199478,0,0,0,0,1.27047312111232,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.813795071099207,0.623912584592421,1.07057393278297,1.26161932027148,0.702848489956279,2.70851489754947,6.82222512167955,1.03473071292505,0,0.921845842708516,0.60818530127658,0.195801157462741,1.37257369524342,0.206768026122887,0,0.320182673410333,0.909382714338778,0,0,0.992431231275107,0.767309866440312,0.280660094433074,0.512556597022804,0.511707249066704,0.482561763430822,2.96836132889982,0.925258162815933,1.42049380250502,0.739144404124282,0.519254429183621,0.697262270759755,0.120859449591622,0.802025881213139,0.276242966807689,0.68888668898764,0.364182336013434,1.31124414959424,0,0.15403067420883,0,0,0,0,1.02056223165909,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0.824328093181778,0.27470839445503,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0,0,0.290033387828457,0.255679882248303,1.15741646340759,0,0.192190067365106,0.382838137483752,0.30347334256665,0.464845549297286,0.94443704049192,0,1.23213432070436,1.06461206063404,0,0.55597265731176,0.286249773483982,0,0,0.38126038784765,0,0.42793898803392,0,2.35484592059769,0.359744915166629,0.54907405947211,0.235624804691373,1.2130948894399,0,1.26377536871694,0,0.731140468893853,0,0.409499734223957,1.1312434556297,0,0,1.32687795048244,0.438450885253763,1.73632660280006,0,1.01455188481352,0,1.12678241012897,0,0.491245205065606,0,0.354761064070598,1.26664581178598,1.64647446479951,0.379473173765715,1.04980416073495,0.192444225451024,0,0,0.188287601553558,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| |||
|short_description=p3@DDB1 | |||
}} |
Revision as of 07:58, 11 January 2014
Short description: | p3@DDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000301764_5end |
EntrezGene: | DDB1 |
HGNC: | 2717 |
UniProt: | Q16531 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.89e-09 | 6 |
light melanocyte | 3.85e-08 | 3 |
melanocyte | 3.86e-08 | 10 |
melanoblast | 3.86e-08 | 10 |
fat cell | 7.72e-08 | 15 |
macrophage dendritic cell progenitor | 8.97e-08 | 61 |
defensive cell | 9.84e-08 | 48 |
phagocyte | 9.84e-08 | 48 |
subcutaneous fat cell | 1.23e-07 | 3 |
monopoietic cell | 3.38e-07 | 59 |
monocyte | 3.38e-07 | 59 |
monoblast | 3.38e-07 | 59 |
promonocyte | 3.38e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.09e-09 | 14 |
musculoskeletal system | 2.57e-08 | 167 |
subcutaneous adipose tissue | 1.23e-07 | 3 |
hypodermis | 1.45e-07 | 5 |
mesoderm | 1.64e-07 | 315 |
mesoderm-derived structure | 1.64e-07 | 315 |
presumptive mesoderm | 1.64e-07 | 315 |