FFCP PHASE1:Hg19::chr11:65779257..65779267,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2478 | |||
|TSSclassifier=strong | |||
|UniProt=Q15828 | |||
|association_with_transcript=-44bp_to_ENST00000312134_5end | |||
|coexpression_cluster_id=C1349 | |||
|description=CAGE_peak_6_at_CST6_5end | |||
|id=chr11:65779257..65779267,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.55e-11!3;CL:0000239!1.44e-10!3;CL:1000615!1.44e-10!3;CL:0002306!1.44e-10!3;CL:1000507!3.56e-09!12;CL:1000494!3.56e-09!12;CL:1000449!3.67e-09!16;CL:0002681!9.54e-09!13;CL:0002584!9.54e-09!13;CL:1000497!5.02e-08!18;CL:0002518!5.02e-08!18;CL:0002537!5.80e-07!5;CL:0000066!5.86e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.87e-50;3!CL:0000349;6.35e-22;19!CL:0002537;2.75e-14;5!CL:0000322;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.89e-50,3;CL:0000349,5.45e-22,19;CL:0002537,2.58e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!7.82e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.12e-17;1!DOID:3603;1.12e-17;1!DOID:4929;1.07e-09;2!DOID:3910;1.64e-09;2!DOID:4468;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.03e-17,1;DOID:3603,1.03e-17,1;DOID:4929,1.03e-09,2;DOID:4468,1.86e-09,2;DOID:3910,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.87e-15!14;UBERON:0000158!9.87e-15!14;UBERON:0000058!2.67e-13!26;UBERON:0003124!3.11e-12!7;UBERON:0000476!1.55e-11!3;UBERON:0000920!1.55e-11!3;UBERON:0006853!1.44e-10!3;UBERON:0007685!1.44e-10!3;UBERON:0004134!1.44e-10!3;UBERON:0005911!2.06e-09!82;UBERON:0000464!3.33e-09!104;UBERON:0004119!3.40e-09!169;UBERON:0000925!3.40e-09!169;UBERON:0006595!3.40e-09!169;UBERON:0009773!3.56e-09!12;UBERON:0001231!3.56e-09!12;UBERON:0004810!3.56e-09!12;UBERON:0004211!3.67e-09!16;UBERON:0001285!3.67e-09!16;UBERON:0007684!3.67e-09!16;UBERON:0003220!3.67e-09!16;UBERON:0004208!3.67e-09!16;UBERON:0001225!9.54e-09!13;UBERON:0008987!9.54e-09!13;UBERON:0006555!1.47e-08!17;UBERON:0005103!1.47e-08!17;UBERON:0000083!1.47e-08!17;UBERON:0009201!1.47e-08!17;UBERON:0004819!1.47e-08!17;UBERON:0006553!1.47e-08!17;UBERON:0003074!1.47e-08!17;UBERON:0003060!1.47e-08!17;UBERON:0000466!1.47e-08!126;UBERON:0000065!2.43e-08!53;UBERON:0006554!4.48e-08!44;UBERON:0000080!5.02e-08!18;UBERON:0002120!5.02e-08!18;UBERON:0004875!5.02e-08!18;UBERON:0005721!5.02e-08!18;UBERON:0005754!5.02e-08!18;UBERON:0007297!5.02e-08!18;UBERON:0002048!5.57e-08!22;UBERON:0000117!5.57e-08!22;UBERON:0000171!5.57e-08!22;UBERON:0000170!5.57e-08!22;UBERON:0005597!5.57e-08!22;UBERON:0000118!5.57e-08!22;UBERON:0000478!5.70e-08!24;UBERON:0001008!7.71e-08!45;UBERON:0005178!2.97e-07!34;UBERON:0002224!2.97e-07!34;UBERON:0004876!4.06e-07!20;UBERON:0005181!5.40e-07!35;UBERON:0001851!5.75e-07!16;UBERON:0004923!5.86e-07!57;UBERON:0003064!7.18e-07!37;UBERON:0005153!9.89e-07!37;UBERON:0003887!9.92e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.87e-50;3!UBERON:0000920;2.87e-50;3!UBERON:0005631;1.92e-41;10!UBERON:0000158;1.92e-41;10!UBERON:0004913;4.83e-18;1!UBERON:0003703;4.83e-18;1!UBERON:0001174;4.83e-18;1!UBERON:0004914;4.83e-18;1!UBERON:0002394;1.28e-17;4!UBERON:0003928;1.28e-17;4!UBERON:0000478;2.18e-17;24!UBERON:0000058;1.57e-15;10!UBERON:0002294;1.72e-10;7!UBERON:0001173;1.72e-10;7!UBERON:0000305;1.77e-10;7!UBERON:0004903;1.64e-09;2!UBERON:0002173;1.64e-09;2!UBERON:0002186;1.64e-09;2!UBERON:0002114;7.08e-07;2!UBERON:0004821;9.37e-07;3!UBERON:0007499;9.37e-07;3!UBERON:0003215;9.37e-07;3!UBERON:0010368;9.37e-07;3!UBERON:0009911;9.37e-07;3!UBERON:0002299;9.37e-07;3!UBERON:0006524;9.37e-07;3!UBERON:0008874;9.37e-07;3!UBERON:0002169;9.37e-07;3!UBERON:0004894;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.89e-50,3;UBERON:0005631,9.03e-30,14;UBERON:0000158,9.03e-30,14;UBERON:0003124,4.28e-22,7;UBERON:0004913,4.44e-18,1;UBERON:0003703,4.44e-18,1;UBERON:0001174,4.44e-18,1;UBERON:0004914,4.44e-18,1;UBERON:0000478,1.93e-17,24;UBERON:0000058,2.72e-14,19;UBERON:0002394,4.30e-12,6;UBERON:0003928,4.30e-12,6;UBERON:0000305,1.68e-10,7;UBERON:0004903,2.02e-09,2;UBERON:0002173,2.02e-09,2;UBERON:0002186,2.02e-09,2;UBERON:0004871,2.66e-09,8;UBERON:0004923,6.85e-09,66;UBERON:0002294,2.29e-08,9;UBERON:0001173,2.29e-08,9;UBERON:0004912,2.29e-08,9;UBERON:0002114,6.88e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,4.18680700783456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0.902399225814824,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,5.04839957415486,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,2.78591888556713,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.269272933229316,0,1.91400695839152,3.11431817566332,5.86338253620498,0,0,0,0,0,0,0,0,0.632994193584081,1.30586246527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,3.252833896775,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0.227662191351298,0.443511850813194,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@CST6 | |||
}} |
Revision as of 08:46, 11 January 2014
Short description: | p6@CST6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CST6_5end |
Coexpression cluster: | C1349_Alveolar_bile_chorionic_clear_amniotic_papillotubular_serous |
Association with transcript: | -44bp_to_ENST00000312134_5end |
EntrezGene: | CST6 |
HGNC: | 2478 |
UniProt: | Q15828 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.89e-50 | 3 |
extraembryonic cell | 5.45e-22 | 19 |
amnion mesenchymal stem cell | 2.58e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.89e-50 | 3 |
extraembryonic membrane | 9.03e-30 | 14 |
membranous layer | 9.03e-30 | 14 |
chorion | 4.28e-22 | 7 |
hepatopancreatic ampulla | 4.44e-18 | 1 |
extrahepatic bile duct | 4.44e-18 | 1 |
common bile duct | 4.44e-18 | 1 |
duodenal papilla | 4.44e-18 | 1 |
extraembryonic structure | 1.93e-17 | 24 |
duct | 2.72e-14 | 19 |
bile duct | 4.30e-12 | 6 |
digestive system duct | 4.30e-12 | 6 |
amnion | 1.68e-10 | 7 |
bronchoalveolar duct junction | 2.02e-09 | 2 |
alveolar duct | 2.02e-09 | 2 |
bronchiole | 2.02e-09 | 2 |
somatic layer of lateral plate mesoderm | 2.66e-09 | 8 |
organ component layer | 6.85e-09 | 66 |
biliary system | 2.29e-08 | 9 |
biliary tree | 2.29e-08 | 9 |
biliary bud | 2.29e-08 | 9 |
duodenum | 6.88e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.03e-17 | 1 |
mucinous cystadenocarcinoma | 1.03e-17 | 1 |
tubular adenocarcinoma | 1.03e-09 | 2 |
clear cell adenocarcinoma | 1.86e-09 | 2 |
lung adenocarcinoma | 2.02e-09 | 2 |