FFCP PHASE1:Hg19::chr17:38210644..38210675,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22963 | |||
|TSSclassifier=weak | |||
|UniProt=O75448,E9PFL1,F8W9R9,F5GY88,F5H5K2,F5H3E6,F5H0K1,F5H0M2,F5H2D6 | |||
|association_with_transcript=0bp_to_ENST00000356271,ENST00000394127,ENST00000394128,ENST00000428757,ENST00000431269,ENST00000501516,ENST00000535071,ENST00000535508,ENST00000536318,ENST00000537674,ENST00000543759_5end | |||
|description=CAGE_peak_1_at_MED24_5end | |||
|id=chr17:38210644..38210675,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.91e-13!86;UBERON:0000073!7.44e-13!94;UBERON:0001016!7.44e-13!94;UBERON:0000924!1.35e-12!173;UBERON:0006601!1.35e-12!173;UBERON:0002346!1.50e-12!90;UBERON:0003056!2.37e-12!61;UBERON:0004121!6.99e-12!169;UBERON:0001017!8.08e-12!82;UBERON:0003075!8.72e-12!86;UBERON:0007284!8.72e-12!86;UBERON:0000955!8.36e-11!69;UBERON:0006238!8.36e-11!69;UBERON:0000153!2.71e-10!129;UBERON:0007811!2.71e-10!129;UBERON:0001049!2.72e-10!57;UBERON:0005068!2.72e-10!57;UBERON:0006241!2.72e-10!57;UBERON:0007135!2.72e-10!57;UBERON:0000483!5.05e-10!309;UBERON:0000119!5.30e-10!312;UBERON:0000064!1.01e-09!219;UBERON:0000033!1.32e-09!123;UBERON:0002616!3.89e-09!59;UBERON:0002780!4.91e-09!41;UBERON:0001890!4.91e-09!41;UBERON:0006240!4.91e-09!41;UBERON:0003080!5.99e-09!42;UBERON:0001893!8.14e-09!34;UBERON:0002791!1.54e-08!33;UBERON:0001869!2.07e-08!32;UBERON:0000956!6.91e-08!25;UBERON:0000203!6.91e-08!25;UBERON:0002020!7.05e-08!34;UBERON:0003528!7.05e-08!34;UBERON:0001950!2.38e-07!20;UBERON:0002619!4.00e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;7.31e-08;25!UBERON:0000203;7.31e-08;25!UBERON:0001893;7.72e-08;34!UBERON:0001869;1.28e-07;32!UBERON:0002791;1.81e-07;32!UBERON:0001950;2.56e-07;20!UBERON:0003528;3.79e-07;34!UBERON:0002020;3.79e-07;34!UBERON:0002619;4.39e-07;22!UBERON:0000073;5.20e-07;53!UBERON:0002616;5.20e-07;53!UBERON:0002780;9.34e-07;41!UBERON:0001890;9.34e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.20e-13,104;UBERON:0002346,6.14e-13,86;UBERON:0004121,8.55e-13,171;UBERON:0000924,8.55e-13,171;UBERON:0006601,8.55e-13,171;UBERON:0003075,3.63e-12,82;UBERON:0007284,3.63e-12,82;UBERON:0003056,4.91e-12,61;UBERON:0001017,7.32e-12,81;UBERON:0001016,2.49e-11,89;UBERON:0000955,7.44e-11,68;UBERON:0006238,7.44e-11,68;UBERON:0000073,9.70e-11,53;UBERON:0002616,9.70e-11,53;UBERON:0001049,2.33e-10,56;UBERON:0005068,2.33e-10,56;UBERON:0006241,2.33e-10,56;UBERON:0007135,2.33e-10,56;UBERON:0000483,5.79e-10,306;UBERON:0000119,6.08e-10,309;UBERON:0002780,4.91e-09,41;UBERON:0001890,4.91e-09,41;UBERON:0003080,4.91e-09,41;UBERON:0006240,4.91e-09,41;UBERON:0001893,8.14e-09,34;UBERON:0001869,2.07e-08,32;UBERON:0002791,3.55e-08,32;UBERON:0000956,6.91e-08,25;UBERON:0000203,6.91e-08,25;UBERON:0003528,7.05e-08,34;UBERON:0002020,7.05e-08,34;UBERON:0001950,2.38e-07,20;UBERON:0011216,2.41e-07,223;UBERON:0002619,4.00e-07,22 | |||
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| |||
|short_description=p1@MED24 | |||
}} |
Revision as of 15:04, 20 January 2014
Short description: | p1@MED24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MED24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356271, ENST00000394127, ENST00000394128, ENST00000428757, ENST00000431269, ENST00000501516, ENST00000535071, ENST00000535508, ENST00000536318, ENST00000537674, ENST00000543759_5end |
EntrezGene: | MED24 |
HGNC: | 22963 |
UniProt: | O75448E9PFL1F8W9R9F5GY88F5H5K2F5H3E6F5H0K1F5H0M2F5H2D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.20e-13 | 104 |
neurectoderm | 6.14e-13 | 86 |
ectoderm-derived structure | 8.55e-13 | 171 |
ectoderm | 8.55e-13 | 171 |
presumptive ectoderm | 8.55e-13 | 171 |
neural plate | 3.63e-12 | 82 |
presumptive neural plate | 3.63e-12 | 82 |
pre-chordal neural plate | 4.91e-12 | 61 |
central nervous system | 7.32e-12 | 81 |
nervous system | 2.49e-11 | 89 |
brain | 7.44e-11 | 68 |
future brain | 7.44e-11 | 68 |
regional part of nervous system | 9.70e-11 | 53 |
regional part of brain | 9.70e-11 | 53 |
neural tube | 2.33e-10 | 56 |
neural rod | 2.33e-10 | 56 |
future spinal cord | 2.33e-10 | 56 |
neural keel | 2.33e-10 | 56 |
epithelium | 5.79e-10 | 306 |
cell layer | 6.08e-10 | 309 |
regional part of forebrain | 4.91e-09 | 41 |
forebrain | 4.91e-09 | 41 |
anterior neural tube | 4.91e-09 | 41 |
future forebrain | 4.91e-09 | 41 |
telencephalon | 8.14e-09 | 34 |
cerebral hemisphere | 2.07e-08 | 32 |
regional part of telencephalon | 3.55e-08 | 32 |
cerebral cortex | 6.91e-08 | 25 |
pallium | 6.91e-08 | 25 |
brain grey matter | 7.05e-08 | 34 |
gray matter | 7.05e-08 | 34 |
neocortex | 2.38e-07 | 20 |
organ system subdivision | 2.41e-07 | 223 |
regional part of cerebral cortex | 4.00e-07 | 22 |