FFCP PHASE1:Hg19::chr1:158224278..158224289,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1634 | |||
|TSSclassifier=not | |||
|UniProt=P06126 | |||
|association_with_transcript=351bp_to_ENST00000289429,NM_001763,uc001frt.2_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_9_at_CD1A_5end | |||
|id=chr1:158224278..158224289,+ | |||
|ontology_enrichment_celltype=CL:0000840!7.22e-50!5;CL:0001029!7.22e-50!5;CL:0000990!2.70e-33!8;CL:0000451!2.94e-27!10;CL:0001014!3.44e-25!2;CL:0001016!3.44e-25!2;CL:0000453!1.16e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000840;3.08e-117;5!CL:0000990;1.98e-78;8!CL:0000451;2.63e-64;10!CL:0001014;1.13e-57;2!CL:0001016;1.13e-57;2!CL:0000453;8.09e-24;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.08e-117,5;CL:0001029,3.08e-117,5;CL:0000990,1.98e-78,8;CL:0000451,2.63e-64,10;CL:0001014,1.13e-57,2;CL:0001016,1.13e-57,2;CL:0000453,8.09e-24,5;CL:0002009,8.32e-12,61;CL:0000557,8.57e-11,67;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!5.44e-19!10;UBERON:0009145!5.44e-19!10;UBERON:0006562!2.71e-17!11;UBERON:0002171!5.38e-13!1;UBERON:0006518!5.38e-13!1;UBERON:0008949!5.38e-13!1;UBERON:0000101!5.38e-13!1;UBERON:0002167!5.38e-13!1;UBERON:0002370!7.70e-13!4;UBERON:0005058!7.70e-13!4;UBERON:0009113!7.70e-13!4;UBERON:0003295!7.70e-13!4;UBERON:0005562!7.70e-13!4;UBERON:0002372!8.64e-13!1;UBERON:0001961!8.64e-13!1;UBERON:0001744!8.64e-13!1;UBERON:0001735!8.64e-13!1;UBERON:0001557!4.01e-10!19;UBERON:0003351!7.33e-09!6;UBERON:0004177!1.02e-07!7;UBERON:0008814!1.17e-07!15;UBERON:0000065!1.43e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.00e-56;2!UBERON:0005058;2.00e-56;2!UBERON:0009113;2.00e-56;2!UBERON:0004177;2.54e-23;5!UBERON:0005057;2.54e-23;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.46e-29,4;UBERON:0005058,7.46e-29,4;UBERON:0009113,7.46e-29,4;UBERON:0003295,7.46e-29,4;UBERON:0005562,7.46e-29,4;UBERON:0003351,1.26e-19,6;UBERON:0004177,5.57e-17,7;UBERON:0005057,5.57e-17,7;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0002193,6.23e-13,108;UBERON:0000974,3.34e-12,10;UBERON:0003408,3.34e-12,10;UBERON:0001042,3.34e-12,10;UBERON:0009145,3.34e-12,10;UBERON:0006562,3.48e-11,11;UBERON:0009722,3.48e-11,11;UBERON:0007690,3.48e-11,11;UBERON:0002371,1.44e-09,76;UBERON:0001474,6.78e-09,82;UBERON:0004765,3.90e-08,90;UBERON:0001434,2.36e-07,100;UBERON:0008814,3.34e-07,18;UBERON:0003081,5.76e-07,203;UBERON:0001557,7.18e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,28.5601706416121,25.7712011202916,24.1983488144335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.2445172258151,56.4875426827303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1314340245882,1.30356900021302,0,0,0,0.435433495793923,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@CD1A | |||
}} |
Revision as of 21:33, 10 January 2014
Short description: | p9@CD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CD1A_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 351bp_to_ENST00000289429, NM_001763, uc001frt.2_5end |
EntrezGene: | CD1A |
HGNC: | 1634 |
UniProt: | P06126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.08e-117 | 5 |
common dendritic progenitor | 3.08e-117 | 5 |
conventional dendritic cell | 1.98e-78 | 8 |
dendritic cell | 2.63e-64 | 10 |
CD1a-positive Langerhans cell | 1.13e-57 | 2 |
immature CD1a-positive Langerhans cell | 1.13e-57 | 2 |
Langerhans cell | 8.09e-24 | 5 |
macrophage dendritic cell progenitor | 8.32e-12 | 61 |
granulocyte monocyte progenitor cell | 8.57e-11 | 67 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.46e-29 | 4 |
hemolymphoid system gland | 7.46e-29 | 4 |
thymic region | 7.46e-29 | 4 |
pharyngeal gland | 7.46e-29 | 4 |
thymus primordium | 7.46e-29 | 4 |
pharyngeal epithelium | 1.26e-19 | 6 |
hemopoietic organ | 5.57e-17 | 7 |
immune organ | 5.57e-17 | 7 |
immune system | 5.86e-15 | 93 |
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
hemolymphoid system | 6.23e-13 | 108 |
neck | 3.34e-12 | 10 |
gland of gut | 3.34e-12 | 10 |
chordate pharynx | 3.34e-12 | 10 |
pharyngeal region of foregut | 3.34e-12 | 10 |
pharynx | 3.48e-11 | 11 |
entire pharyngeal arch endoderm | 3.48e-11 | 11 |
early pharyngeal endoderm | 3.48e-11 | 11 |
bone marrow | 1.44e-09 | 76 |
bone element | 6.78e-09 | 82 |
skeletal element | 3.90e-08 | 90 |
skeletal system | 2.36e-07 | 100 |
pharyngeal arch system | 3.34e-07 | 18 |
lateral plate mesoderm | 5.76e-07 | 203 |
upper respiratory tract | 7.18e-07 | 19 |