FFCP PHASE1:Hg19::chr1:180601215..180601233,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12827 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000367589_5end | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_4_at_XPR1_5end | |||
|id=chr1:180601215..180601233,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.60e-09!45;CL:0002057!5.65e-09!42;CL:0000766!1.12e-07!76;CL:0000557!1.42e-07!71;CL:0000839!9.64e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.42e-09;33!CL:0002057;9.42e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.12e-09,42;CL:0002057,5.12e-09,42;CL:0000766,9.41e-08,72;CL:0000473,1.44e-07,48;CL:0000234,1.44e-07,48;CL:0000557,2.45e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.01e-08;29!CL:0002057;3.97e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!2.57e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.98e-08;9!UBERON:0001557;5.98e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.97e-08,9;UBERON:0000065,6.11e-07,54;UBERON:0001004,6.82e-07,74 | |||
|phase1_expression=1.81678379270557,1.2846031433459,0.563817616383885,1.0007329835313,1.78784437770915,2.61701557230111,0,0,0.522371256399677,1.47440361900905,0,0.436882744260345,0,0.618831764800233,1.32558950291166,2.01697543935533,0,0.730310090387373,0.975865597581014,0.246242116153576,0,0.626909442956176,2.86235987131057,0.821246550437305,0.87879847716362,0.382067028739756,0.492603536699674,0.550975469195755,0.393364276848904,1.15148819429164,1.54816123316076,0,0,1.47901604066715,1.08454080812422,0.426507697462265,0,1.66198622559563,1.20326668482085,1.30206522429511,0,0,0,1.16318591023652,0.755751887377619,0.970336244751265,1.16214518452842,3.28934310417461,1.23882548358041,1.1507695692886,1.5369642391746,2.83778675866302,1.37898272294647,3.87290810150296,4.06279459783025,1.12945403725563,1.09162460023138,2.24723484445085,1.53041946185451,2.24650318953266,2.55734850319616,0.659702600373432,0.398927315243264,1.27867425159808,1.7412554317715,1.70215567407342,4.35975574296902,1.25624332628372,1.0429658368404,3.9093992046921,0.605399502633369,3.31449872388808,2.53169909952708,0.845021145247767,0.850417199860174,0,0.336985893439485,0.901061357049038,0,1.42506371870624,0.99458338599545,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,3.92355994087075,0,3.540775862049,1.57204305099666,2.87842098599313,0.167186495390678,0.32592226663359,0.946895611469467,0,0.222820913770347,1.17842362989935,0.664601683750863,0.270803863765016,0.640456598628376,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,0.444859689486181,0.267540828089713,0,0.113309342697566,1.53288197440768,1.37450978193052,0.759059076058509,0,0,0,0,0,0,0.236777252044017,0,3.22570789159572,4.54648332831962,2.31719046212478,0,0,0.12786256184353,0.722878304769133,1.50401373190767,0.434539556882471,0.795285947051099,0,0.378139268656271,0,0.43917392846563,2.48860243445654,0.728590576585084,0.370784442784429,0.324547393654683,0.870648686496336,0.26591592103773,0.238490624305342,1.14398982156026,0.371457501329565,0.39752481473341,0,0,0,0,0.550236083880135,0,0.516833518338658,0.71153252537342,0.66944122552934,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,1.62028389576352,0.446498641420399,0.44905874525234,0.225222960966644,0,0,0.183201743930407,2.63560834872127,7.75560528296651,0.872188104285069,0.993943903390637,0.633152558322899,1.05927344650575,1.43418310374407,0.709336764396714,0,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0.309977343527296,0,0.989067717114227,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0.453728732640084,1.07633781413317,0.213557388818567,0.211931901159562,0.900273288253207,0.103052529238439,0.515281080091258,0.37223371266318,1.5189869901714,0.876933046450788,0,0.460249493211497,0,0,0.403008392910561,0.508681776931463,0.966304265816484,1.09098448236334,1.43402297694502,0.487894824518382,0.530119073285941,0.464775771478074,1.86589899027667,1.00928340350251,0.72995471815166,0,1.28648187638577,0,0,0,2.72105640091641,2.52877035117153,3.61516544825223,2.42646740011267,1.96091499683166,3.32178866755535,2.69662616320329,2.15843611637881,4.23221872641029,0.738155454624648,0,0,0,0,1.96565443335525,0,0,0.122988438543114,0,1.64625428112938,0,0.100528972411631,0.370353780634118,0,0,0,0.463721619900307,0.352226082707465,0.433099343283221,0,0.190254152234598,1.58040879591855,4.29243081047436,0.492434012174795,1.63802985597466,0.594524649154913,2.81201501960331,2.01578553838631,0.992425680696705,1.61205340865127,2.03443756959773,0.766765358330422,84.2454136802063,0.792435906119034,5.80518723514162,2.01767934783746,4.16600030307054,0.126995788584338,0,0,1.71072446022705,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.499864955910285,0,0.502257091432126,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0.784596007954691,2.95546140302891,2.15627574859517,3.20857590699371,6.60646022978405,7.8083912314573,0.773288812777695,4.52293916402742,0.637938751653163,2.24702107184155,0,1.65766205374414,0.736148950314839,0.500170521059677,0.271265023699736,0.207970861530807,1.42743191037729,0.630809660135739,0,0.601892199455438,0,1.03473071292505,0,0,0.521301686808497,0,0.343143423810856,0.82707210449155,0.647142602455851,0.74709290462411,0.606255142892519,0,0.604780586659361,2.23297027036899,1.84154367945675,1.68396056659844,1.28139149255701,2.04682899626681,0.804269605718038,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0,0.348631135379878,0.604297247958111,8.22076528243468,0.276242966807689,0.459257792658427,0.728364672026868,0.262248829918848,0,0.462092022626489,0,0,0,0,0.170093705276516,0.647747748306418,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0.657779629937804,1.0457418040996,0,0.328014645699706,0,0.618246069886334,4.12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| |||
|short_description=p4@XPR1 | |||
}} |
Revision as of 22:33, 10 January 2014
Short description: | p4@XPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_XPR1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 47bp_to_ENST00000367589_5end |
EntrezGene: | XPR1 |
HGNC: | 12827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.12e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.12e-09 | 42 |
myeloid leukocyte | 9.41e-08 | 72 |
defensive cell | 1.44e-07 | 48 |
phagocyte | 1.44e-07 | 48 |
granulocyte monocyte progenitor cell | 2.45e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.97e-08 | 9 |
respiratory tract | 6.11e-07 | 54 |
respiratory system | 6.82e-07 | 74 |