FFCP PHASE1:Hg19::chr20:33894879..33894903,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15891 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000472559_5end | |||
|description=CAGE_peak_2_at_UQCC_5end | |||
|id=chr20:33894879..33894903,- | |||
|ontology_enrichment_celltype=CL:0000220!3.66e-23!246;CL:0002321!1.50e-22!248;CL:0000548!1.14e-20!679;CL:0000004!1.14e-20!679;CL:0000255!1.14e-20!679;CL:0000012!4.30e-20!682;CL:0000144!6.40e-18!625;CL:0000055!5.14e-17!180;CL:0002371!3.47e-15!591;CL:0000066!1.69e-14!254;CL:0000003!5.62e-13!722;CL:0000222!2.77e-12!119;CL:0000057!1.14e-09!75;CL:1000507!2.05e-07!12;CL:1000494!2.05e-07!12;CL:0000063!2.98e-07!578;CL:0002076!4.95e-07!43;CL:1000449!6.94e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.31e-11;15!CL:1000497;1.50e-11;17!CL:0002518;1.50e-11;17!CL:1000507;6.51e-11;10!CL:1000494;6.51e-11;10!CL:0000077;2.27e-08;19!CL:0002681;3.59e-08;12!CL:0002584;3.59e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.94e-12,15;CL:1000497,5.02e-12,17;CL:0002518,5.02e-12,17;CL:1000507,2.62e-11,10;CL:1000494,2.62e-11,10;CL:0002681,1.28e-08,12;CL:0002584,1.28e-08,12;CL:0000066,1.92e-08,253;CL:0000077,2.83e-08,19;CL:0002321,7.44e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.45e-11!143;UBERON:0002100!1.47e-10!216;UBERON:0003104!1.10e-09!238;UBERON:0009142!1.10e-09!238;UBERON:0000481!1.40e-09!347;UBERON:0000914!2.31e-09!83;UBERON:0002329!2.31e-09!83;UBERON:0003077!2.31e-09!83;UBERON:0003059!2.31e-09!83;UBERON:0007282!2.31e-09!83;UBERON:0009618!2.31e-09!83;UBERON:0007285!2.31e-09!83;UBERON:0000475!6.75e-08!365;UBERON:0004290!7.32e-08!70;UBERON:0000486!1.51e-07!82;UBERON:0009773!2.05e-07!12;UBERON:0001231!2.05e-07!12;UBERON:0004810!2.05e-07!12;UBERON:0000119!3.60e-07!312;UBERON:0000483!5.53e-07!309;UBERON:0004211!6.94e-07!16;UBERON:0001285!6.94e-07!16;UBERON:0007684!6.94e-07!16;UBERON:0003220!6.94e-07!16;UBERON:0004208!6.94e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.31e-11;15!UBERON:0004819;1.31e-11;15!UBERON:0001285;1.31e-11;15!UBERON:0007684;1.31e-11;15!UBERON:0004211;6.51e-11;10!UBERON:0009773;6.51e-11;10!UBERON:0001231;6.51e-11;10!UBERON:0004810;6.51e-11;10!UBERON:0011135;2.59e-08;5!UBERON:0002216;2.59e-08;5!UBERON:0011134;2.59e-08;5!UBERON:0002209;2.59e-08;5!UBERON:0002213;2.59e-08;5!UBERON:0007844;2.59e-08;5!UBERON:0011138;2.59e-08;5!UBERON:0001130;2.59e-08;5!UBERON:0001066;2.59e-08;5!UBERON:0001468;2.59e-08;5!UBERON:0001225;3.59e-08;12!UBERON:0008987;3.59e-08;12!UBERON:0000353;6.95e-08;15!UBERON:0001851;1.60e-07;15!UBERON:0002113;3.39e-07;24!UBERON:0011143;3.39e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.94e-12,15;UBERON:0009773,2.94e-12,15;UBERON:0001231,2.94e-12,15;UBERON:0001285,2.94e-12,15;UBERON:0007684,2.94e-12,15;UBERON:0004208,2.94e-12,15;UBERON:0004810,2.62e-11,10;UBERON:0006555,2.78e-11,16;UBERON:0004819,2.78e-11,16;UBERON:0001225,1.28e-08,12;UBERON:0008987,1.28e-08,12;UBERON:0011135,1.98e-08,5;UBERON:0002216,1.98e-08,5;UBERON:0011134,1.98e-08,5;UBERON:0002209,1.98e-08,5;UBERON:0002213,1.98e-08,5;UBERON:0005856,1.98e-08,5;UBERON:0005866,1.98e-08,5;UBERON:0005863,1.98e-08,5;UBERON:0007844,1.98e-08,5;UBERON:0011138,1.98e-08,5;UBERON:0001130,1.98e-08,5;UBERON:0001066,1.98e-08,5;UBERON:0001468,1.98e-08,5;UBERON:0000353,2.78e-08,15;UBERON:0001851,6.30e-08,15;UBERON:0003104,2.41e-07,160;UBERON:0009142,2.41e-07,160 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,2.79120467188971,0.218441372130172,1.05506791291381,3.58922423584135,4.97096063591874,0,0,0.730310090387373,0.487932798790507,2.09305798730539,3.06001036866379,0.940364164434263,0.572471974262113,2.6006140763848,1.25542639594803,0,0,0,0,0,0,0,1.50602959389125,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.850813354476611,1.33037638477538,0.527008714158756,0,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.838998872419812,1.10047216776027,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.357198913136319,0,0,0,0,0,0,0,1.3082821564276,1.98788780678127,0.759783069987479,2.78059279707759,0,0.354668382198357,0.560677600142307,0,2.22000793575444,0.933633106199299,0.67355336034844,0.653847612453835,0,0,0.70296429550139,1.5608003841516,2.2818872861778,0.597794722207204,1.29177948508141,0.971237666208789,1.26405726032024,1.02077085627447,1.22834317311768,0.619954687054593,0,0,3.64064544775211,4.31170885089743,0.336672227908132,0.500474079487857,0.554128230968366,0.438977620880838,0,0.300476117813194,0.567160915800105,0.538168907066586,1.2813443329114,0.211931901159562,0,0.412210116953756,0.515281080091258,0.930584281657949,0,0.292311015483596,0,0.276149695926898,0,0.710019185033229,0.201504196455281,0,0.386521706326594,1.09098448236334,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0.643240938192885,1.38134921352481,3.25057549622385,10.8281922250438,0,0,0.241011029883482,0,0,0,0,0,0,0.738155454624648,5.60967095213783,0.4115740113314,0,0,0,0,0,0.245976877086227,0.686271241194102,0.768251997860379,1.1240175325762,0.502644862058154,0.185176890317059,0.325808305310325,5.19967392639789,0,0.463721619900307,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,1.87467667973554,0.839910640994298,0.141775097242386,0.895585227028483,1.45316969256981,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,1.00917975910825,0,0.4400297149257,0.258543431515556,0,0,0,0,2.82928111688356,4.25547396069835,2.93064396917709,0.285955987316295,3.7983512377401,0,0.977208552881205,0,0.791951872933429,1.50719688529793,0,1.19967589418468,0,0,0,2.15662369942424,1.14861935834114,0,0.289562613335158,1.02738161275192,0.895304816199478,0,0,0,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,1.34960640891054,6.5022167737758,4.88277042659524,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,2.27407504055985,2.0694614258501,1.32845119707087,1.65932251687533,0.260650843404249,1.17480694477644,0,0,0,0,0,1.66435439510497,1.5119514666484,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0.925258162815933,0.532685175939381,1.14978018419333,3.63478100428535,1.39452454151951,0.120859449591622,0.601519410909855,0.184161977871793,0.918515585316854,0.910455840033585,0.262248829918848,0.902399225814824,1.30926073077505,4.70609861506113,4.38417673959782,1.89992932007176,0,1.87103075804167,1.72732732881711,0,2.98041081298238,2.50844886927427,1.52925763827023,3.3243040357149,4.70136984916574,0,0,0.512900250232778,0.984043937099117,3.25378394664303,0,0,0,0,0,0,0.48335359146061,1.07834031980251,0.767518373630648,0.689182862422653,1.50388342815583,2.32026710262766,0.852266274161009,0.0890320356467374,0,0.576570202095319,0.255225424989168,0.30347334256665,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,1.116475108079,0.632758849437452,2.47819252100972,2.81487570442467,0,1.27281299170375,0,0.359744915166629,0.823611089208164,0.706874414074119,0.202182481573316,1.58510321173008,0.421258456238981,0.48763373908959,0,0,0.272999822815972,0.424216295861138,1.13008116620243,0,0,0,1.73632660280006,1.31178950409327,1.42037263873893,1.239293992399,1.12678241012897,1.29070216983646,0.687743287091848,0.35667105148125,0,0.633322905892992,0,1.89736586882858,6.29882496440969,0.48111056362756,2.01090682660736,1.08890984861323,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.835218521685727,0,0,0,0,0,0,0,0,4.2620422020962,0,0,0,0,0,0.667852230137435,8.89940920824502,0,0,0,0,1.94310496754094,0,0.622079175323615,1.97710372524119,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0,0,4.43095935508857,3.10142335502381,0.141353071433941,0,0,0.0884575645033392,0,0,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| |||
|short_description=p2@UQCC | |||
}} |
Revision as of 10:56, 21 January 2014
Short description: | p2@UQCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UQCC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472559_5end |
EntrezGene: | UQCC |
HGNC: | 15891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.94e-12 | 15 |
kidney cell | 5.02e-12 | 17 |
kidney epithelial cell | 5.02e-12 | 17 |
kidney tubule cell | 2.62e-11 | 10 |
nephron tubule epithelial cell | 2.62e-11 | 10 |
kidney cortical cell | 1.28e-08 | 12 |
renal cortical epithelial cell | 1.28e-08 | 12 |
epithelial cell | 1.92e-08 | 253 |
mesothelial cell | 2.83e-08 | 19 |
embryonic cell | 7.44e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.94e-12 | 15 |
renal tubule | 2.94e-12 | 15 |
nephron tubule | 2.94e-12 | 15 |
nephron | 2.94e-12 | 15 |
uriniferous tubule | 2.94e-12 | 15 |
nephrogenic mesenchyme | 2.94e-12 | 15 |
nephron tubule epithelium | 2.62e-11 | 10 |
excretory tube | 2.78e-11 | 16 |
kidney epithelium | 2.78e-11 | 16 |
cortex of kidney | 1.28e-08 | 12 |
renal parenchyma | 1.28e-08 | 12 |
intervertebral cartilage | 1.98e-08 | 5 |
symphysis | 1.98e-08 | 5 |
nonsynovial joint | 1.98e-08 | 5 |
fibrous joint | 1.98e-08 | 5 |
cartilaginous joint | 1.98e-08 | 5 |
developing mesenchymal condensation | 1.98e-08 | 5 |
pre-cartilage condensation | 1.98e-08 | 5 |
cartilaginous condensation | 1.98e-08 | 5 |
cartilage element | 1.98e-08 | 5 |
post-cranial axial skeletal system | 1.98e-08 | 5 |
vertebral column | 1.98e-08 | 5 |
intervertebral disk | 1.98e-08 | 5 |
intervertebral joint | 1.98e-08 | 5 |
parenchyma | 2.78e-08 | 15 |
cortex | 6.30e-08 | 15 |
mesenchyme | 2.41e-07 | 160 |
entire embryonic mesenchyme | 2.41e-07 | 160 |