FFCP PHASE1:Hg19::chr20:62321640..62321645,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_BC131817_5end | |||
|coexpression_cluster_id=C617 | |||
|description=CAGE_peak_1_at_BC131817_5end | |||
|id=chr20:62321640..62321645,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:3111!1.53e-21!1;DOID:3603!1.53e-21!1 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.23e-66;1!DOID:3603;1.23e-66;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.23e-66,1;DOID:3603,1.23e-66,1 | |||
|ontology_enrichment_uberon=UBERON:0002372!1.88e-21!1;UBERON:0001961!1.88e-21!1;UBERON:0001744!1.88e-21!1;UBERON:0001735!1.88e-21!1;UBERON:0001154!4.22e-21!1;UBERON:0001153!4.22e-21!1;UBERON:0003127!2.23e-11!2;UBERON:0000341!3.35e-11!2;UBERON:0007023!1.17e-10!115;UBERON:0001155!1.05e-09!9;UBERON:0001042!5.57e-09!10;UBERON:0009145!5.57e-09!10;UBERON:0006562!3.03e-08!11;UBERON:0000059!4.18e-08!11;UBERON:0001723!5.93e-08!3;UBERON:0001033!5.93e-08!3;UBERON:0010056!5.93e-08!3;UBERON:0000344!1.09e-07!12;UBERON:0000063!2.85e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.34e-66;1!UBERON:0001961;3.34e-66;1!UBERON:0001744;3.34e-66;1!UBERON:0001042;3.34e-66;1!UBERON:0001735;3.34e-66;1!UBERON:0003127;5.96e-34;2!UBERON:0006562;5.96e-34;2!UBERON:0000344;2.49e-14;20!UBERON:0003126;9.43e-11;7!UBERON:0001005;9.43e-11;7!UBERON:0002465;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.39e-66,1;UBERON:0001961,2.39e-66,1;UBERON:0001744,2.39e-66,1;UBERON:0001735,2.39e-66,1;UBERON:0003127,7.05e-34,2;UBERON:0000344,2.41e-14,20;UBERON:0003126,9.89e-11,7;UBERON:0001005,9.89e-11,7;UBERON:0002465,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97330007083469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,1.0776328482334,1.00411087549747,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BC131817 | |||
}} |
Revision as of 12:48, 21 January 2014
Short description: | p1@BC131817 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC131817_5end |
Coexpression cluster: | C617_mucinous_gall_signet_bile_maxillary_keratoacanthoma_Alveolar |
Association with transcript: | -10bp_to_BC131817_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 2.39e-66 | 1 |
mucosa-associated lymphoid tissue | 2.39e-66 | 1 |
lymphoid tissue | 2.39e-66 | 1 |
tonsillar ring | 2.39e-66 | 1 |
open tracheal system trachea | 7.05e-34 | 2 |
mucosa | 2.41e-14 | 20 |
trachea | 9.89e-11 | 7 |
respiratory airway | 9.89e-11 | 7 |
lymphoid system | 6.13e-08 | 10 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.23e-66 | 1 |
mucinous cystadenocarcinoma | 1.23e-66 | 1 |