FFCP PHASE1:Hg19::chr21:44839491..44839501,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C541 | |||
|description=CAGE_peak_at_chr21:44839491..44839501,- | |||
|id=chr21:44839491..44839501,- | |||
|ontology_enrichment_celltype=CL:0000188!1.13e-12!9 | |||
|ontology_enrichment_celltype_v019=CL:0000082;5.22e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,5.22e-08,19;CL:0000066,1.44e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.38e-51;29!UBERON:0001041;1.45e-08;30!UBERON:0006595;1.04e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.93e-12!106;DOID:0050687!6.17e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1324;5.33e-10;15!DOID:0050615;2.07e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.15e-19,106;DOID:0050687,2.63e-14,143;DOID:1324,5.33e-10,15;DOID:162,7.82e-10,235;DOID:14566,1.33e-09,239;DOID:0050615,2.07e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.16e-43!9;UBERON:0008947!2.12e-22!38;UBERON:0003258!2.12e-22!38;UBERON:0001557!1.47e-19!19;UBERON:0000072!5.98e-18!46;UBERON:0000065!3.67e-15!53;UBERON:0001041!2.37e-13!98;UBERON:0000077!2.12e-11!130;UBERON:0001004!2.41e-10!72;UBERON:0004921!3.62e-10!129;UBERON:0004185!3.62e-10!129;UBERON:0003104!2.49e-09!238;UBERON:0009142!2.49e-09!238;UBERON:0001007!1.01e-08!155;UBERON:0001555!1.01e-08!155;UBERON:0007026!1.01e-08!155;UBERON:0000063!5.23e-08!97;UBERON:0004119!1.25e-07!169;UBERON:0000925!1.25e-07!169;UBERON:0006595!1.25e-07!169;UBERON:0001048!7.06e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.64e-81;9!UBERON:0001557;1.64e-81;9!UBERON:0000072;1.74e-33;37!UBERON:0000065;9.54e-32;44!UBERON:0001004;2.76e-12;65!UBERON:0004802;5.22e-08;19!UBERON:0000115;5.22e-08;19!UBERON:0002048;5.51e-07;22!UBERON:0004807;5.51e-07;22!UBERON:0000117;5.51e-07;22!UBERON:0000171;5.51e-07;22!UBERON:0000170;5.51e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.09e-81,9;UBERON:0008947,3.54e-39,38;UBERON:0003258,3.54e-39,38;UBERON:0001557,1.73e-38,19;UBERON:0000072,1.54e-31,47;UBERON:0000065,2.35e-27,54;UBERON:0001041,2.98e-20,87;UBERON:0001004,9.60e-20,74;UBERON:0004921,1.52e-14,118;UBERON:0001007,1.16e-11,145;UBERON:0001555,1.16e-11,145;UBERON:0007026,1.16e-11,145;UBERON:0001048,1.52e-10,160;UBERON:0004119,1.79e-10,160;UBERON:0000925,1.79e-10,160;UBERON:0006595,1.79e-10,160;UBERON:0004802,5.22e-08,19;UBERON:0000115,5.22e-08,19;UBERON:0011216,4.32e-07,223;UBERON:0002048,5.51e-07,22;UBERON:0000117,5.51e-07,22;UBERON:0000171,5.51e-07,22;UBERON:0000170,5.51e-07,22;UBERON:0005597,5.51e-07,22;UBERON:0000118,5.51e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,1.77460200059766,1.68584690078102,0.964044119533928,1.43382164552112,1.08939722046203,2.13543557199987,0.539325232640658,1.37355025587742,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.551346289938122,0,0,0.255679882248303,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79021174675609,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,4.49136595359079,0,0,0,0,0,0,0,0,0,2.72346158797475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,1.29649318189335,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12360880465543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.98803932595153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr21:44839491..44839501,- | |||
}} |
Revision as of 14:03, 21 January 2014
Short description: | p@chr21:44839491..44839501, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44839491..44839501, - |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.22e-08 | 19 |
epithelial cell | 1.44e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.09e-81 | 9 |
respiratory primordium | 3.54e-39 | 38 |
endoderm of foregut | 3.54e-39 | 38 |
upper respiratory tract | 1.73e-38 | 19 |
segment of respiratory tract | 1.54e-31 | 47 |
respiratory tract | 2.35e-27 | 54 |
foregut | 2.98e-20 | 87 |
respiratory system | 9.60e-20 | 74 |
subdivision of digestive tract | 1.52e-14 | 118 |
digestive system | 1.16e-11 | 145 |
digestive tract | 1.16e-11 | 145 |
primitive gut | 1.16e-11 | 145 |
primordium | 1.52e-10 | 160 |
endoderm-derived structure | 1.79e-10 | 160 |
endoderm | 1.79e-10 | 160 |
presumptive endoderm | 1.79e-10 | 160 |
respiratory tract epithelium | 5.22e-08 | 19 |
lung epithelium | 5.22e-08 | 19 |
organ system subdivision | 4.32e-07 | 223 |
lung | 5.51e-07 | 22 |
respiratory tube | 5.51e-07 | 22 |
respiration organ | 5.51e-07 | 22 |
pair of lungs | 5.51e-07 | 22 |
lung primordium | 5.51e-07 | 22 |
lung bud | 5.51e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.15e-19 | 106 |
cell type cancer | 2.63e-14 | 143 |
lung cancer | 5.33e-10 | 15 |
cancer | 7.82e-10 | 235 |
disease of cellular proliferation | 1.33e-09 | 239 |
respiratory system cancer | 2.07e-09 | 16 |