FFCP PHASE1:Hg19::chr2:113012592..113012671,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30941 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5P1 | |||
|association_with_transcript=0bp_to_ENST00000272570,ENST00000474234,ENST00000495264,NM_032494,uc002thp.2_5end | |||
|description=CAGE_peak_1_at_ZC3H8_5end | |||
|id=chr2:113012592..113012671,- | |||
|ontology_enrichment_celltype=CL:0000542!1.63e-14!53;CL:0000051!1.63e-14!53;CL:0000838!2.46e-14!52;CL:0000037!4.80e-14!172;CL:0000566!4.80e-14!172;CL:0002032!4.63e-13!165;CL:0000837!4.63e-13!165;CL:0000988!1.56e-12!182;CL:0000084!4.76e-08!25;CL:0000827!4.76e-08!25;CL:0002031!7.00e-08!124;CL:0000738!2.51e-07!140;CL:0002087!2.61e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.01e-09;53!CL:0000084;4.80e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.63e-14,53;CL:0000051,1.63e-14,53;CL:0000838,2.46e-14,52;CL:0000037,8.92e-14,168;CL:0002032,8.47e-13,161;CL:0000837,8.47e-13,161;CL:0000988,1.09e-12,177;CL:0000084,4.76e-08,25;CL:0000827,4.76e-08,25;CL:0002031,1.19e-07,120;CL:0000738,4.27e-07,136;CL:0002087,4.39e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;9.01e-09;53 | |||
|ontology_enrichment_disease=DOID:162!1.00e-29!235;DOID:14566!5.10e-29!239;DOID:0050687!6.37e-19!143;DOID:0050686!8.71e-16!137;DOID:305!4.49e-15!106;DOID:2531!2.49e-14!51;DOID:0060083!2.49e-14!51;DOID:1240!2.26e-12!39;DOID:8692!1.61e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.78e-10;39!DOID:2531;1.45e-09;51!DOID:0060083;1.45e-09;51!DOID:8692;2.02e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.00e-29,235;DOID:14566,5.10e-29,239;DOID:0050687,6.37e-19,143;DOID:0050686,8.71e-16,137;DOID:305,4.49e-15,106;DOID:2531,2.49e-14,51;DOID:0060083,2.49e-14,51;DOID:1240,2.26e-12,39;DOID:8692,1.61e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.41e-10!41;UBERON:0001890!2.41e-10!41;UBERON:0006240!2.41e-10!41;UBERON:0001049!6.35e-10!57;UBERON:0005068!6.35e-10!57;UBERON:0006241!6.35e-10!57;UBERON:0007135!6.35e-10!57;UBERON:0003080!9.39e-10!42;UBERON:0000073!5.53e-09!94;UBERON:0001016!5.53e-09!94;UBERON:0002020!8.27e-09!34;UBERON:0003528!8.27e-09!34;UBERON:0001017!1.54e-08!82;UBERON:0002619!1.65e-08!22;UBERON:0001869!2.02e-08!32;UBERON:0001893!2.03e-08!34;UBERON:0002791!3.47e-08!33;UBERON:0001950!5.73e-08!20;UBERON:0000955!9.58e-08!69;UBERON:0006238!9.58e-08!69;UBERON:0005743!1.66e-07!86;UBERON:0007023!2.57e-07!115;UBERON:0000956!6.83e-07!25;UBERON:0000203!6.83e-07!25;UBERON:0002616!7.07e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.77e-08;22!UBERON:0001950;6.18e-08;20!UBERON:0002780;1.14e-07;41!UBERON:0001890;1.14e-07;41!UBERON:0001869;1.26e-07;32!UBERON:0003528;1.34e-07;34!UBERON:0002020;1.34e-07;34!UBERON:0002791;1.38e-07;32!UBERON:0001893;3.30e-07;34!UBERON:0000956;7.36e-07;25!UBERON:0000203;7.36e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.86e-10,89;UBERON:0001049,2.05e-10,56;UBERON:0005068,2.05e-10,56;UBERON:0006241,2.05e-10,56;UBERON:0007135,2.05e-10,56;UBERON:0002780,2.41e-10,41;UBERON:0001890,2.41e-10,41;UBERON:0003080,2.41e-10,41;UBERON:0006240,2.41e-10,41;UBERON:0000073,8.47e-10,53;UBERON:0002616,8.47e-10,53;UBERON:0001017,6.90e-09,81;UBERON:0003528,8.27e-09,34;UBERON:0002020,8.27e-09,34;UBERON:0002619,1.65e-08,22;UBERON:0001869,2.02e-08,32;UBERON:0001893,2.03e-08,34;UBERON:0002791,2.56e-08,32;UBERON:0000955,4.18e-08,68;UBERON:0006238,4.18e-08,68;UBERON:0001950,5.73e-08,20;UBERON:0011216,2.18e-07,223;UBERON:0007023,5.17e-07,114;UBERON:0000956,6.83e-07,25;UBERON:0000203,6.83e-07,25 | |||
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| |||
|short_description=p1@ZC3H8 | |||
}} |
Revision as of 04:55, 21 January 2014
Short description: | p1@ZC3H8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZC3H8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000272570, ENST00000474234, ENST00000495264, NM_032494, uc002thp.2_5end |
EntrezGene: | ZC3H8 |
HGNC: | 30941 |
UniProt: | Q8N5P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.63e-14 | 53 |
common lymphoid progenitor | 1.63e-14 | 53 |
lymphoid lineage restricted progenitor cell | 2.46e-14 | 52 |
hematopoietic stem cell | 8.92e-14 | 168 |
hematopoietic oligopotent progenitor cell | 8.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.47e-13 | 161 |
hematopoietic cell | 1.09e-12 | 177 |
T cell | 4.76e-08 | 25 |
pro-T cell | 4.76e-08 | 25 |
hematopoietic lineage restricted progenitor cell | 1.19e-07 | 120 |
leukocyte | 4.27e-07 | 136 |
nongranular leukocyte | 4.39e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.86e-10 | 89 |
neural tube | 2.05e-10 | 56 |
neural rod | 2.05e-10 | 56 |
future spinal cord | 2.05e-10 | 56 |
neural keel | 2.05e-10 | 56 |
regional part of forebrain | 2.41e-10 | 41 |
forebrain | 2.41e-10 | 41 |
anterior neural tube | 2.41e-10 | 41 |
future forebrain | 2.41e-10 | 41 |
regional part of nervous system | 8.47e-10 | 53 |
regional part of brain | 8.47e-10 | 53 |
central nervous system | 6.90e-09 | 81 |
brain grey matter | 8.27e-09 | 34 |
gray matter | 8.27e-09 | 34 |
regional part of cerebral cortex | 1.65e-08 | 22 |
cerebral hemisphere | 2.02e-08 | 32 |
telencephalon | 2.03e-08 | 34 |
regional part of telencephalon | 2.56e-08 | 32 |
brain | 4.18e-08 | 68 |
future brain | 4.18e-08 | 68 |
neocortex | 5.73e-08 | 20 |
organ system subdivision | 2.18e-07 | 223 |
adult organism | 5.17e-07 | 114 |
cerebral cortex | 6.83e-07 | 25 |
pallium | 6.83e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.00e-29 | 235 |
disease of cellular proliferation | 5.10e-29 | 239 |
cell type cancer | 6.37e-19 | 143 |
organ system cancer | 8.71e-16 | 137 |
carcinoma | 4.49e-15 | 106 |
hematologic cancer | 2.49e-14 | 51 |
immune system cancer | 2.49e-14 | 51 |
leukemia | 2.26e-12 | 39 |
myeloid leukemia | 1.61e-09 | 31 |