FFCP PHASE1:Mm9::chr10:106708673..106708752,+: Difference between revisions
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{{FFCP|EntrezGene=108030|HGNC=|MCL_coexpression_id=0|UniProt=Q3TUM0,Q8JZS0,O88951|association_with_transcript=-134bp_to_NM_001033223,NM_001039354,uc007gyx.1,uc007gyy.1_5end|description=CAGE_peak_2_at_Lin7a_5end|id=chr10:106708673..106708752,+|ontology_enrichment_celltype=CL:0000540!6.18e-08!33;CL:0000047!6.18e-08!33;CL:0000031!6.18e-08!33;CL:0000404!6.18e-08!33;CL:0000117!6.38e-08!23;CL:0000337!6.38e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-13,23;CL:0000337,3.42e-13,23;CL:0000540,1.75e-12,33;CL:0000047,1.75e-12,33;CL:0000031,1.75e-12,33;CL:0000404,1.75e-12,33;CL:0000393,9.94e-10,39;CL:0000211,9.94e-10,39;CL:0002319,2.44e-08,43;CL:0000221,4.93e-08,44;CL:0000133,4.93e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.87e-21!71;UBERON:0003075!3.87e-21!71;UBERON:0007284!3.87e-21!71;UBERON:0000033!4.27e-18!63;UBERON:0001017!6.21e-18!73;UBERON:0005743!6.21e-18!73;UBERON:0004121!7.00e-18!102;UBERON:0000924!7.00e-18!102;UBERON:0006601!7.00e-18!102;UBERON:0000073!8.88e-17!75;UBERON:0001016!8.88e-17!75;UBERON:0001049!5.55e-16!52;UBERON:0005068!5.55e-16!52;UBERON:0006241!5.55e-16!52;UBERON:0007135!5.55e-16!52;UBERON:0000955!3.28e-15!50;UBERON:0006238!3.28e-15!50;UBERON:0002616!1.53e-14!49;UBERON:0003056!3.17e-14!49;UBERON:0002020!5.89e-13!34;UBERON:0003080!7.50e-11!40;UBERON:0002791!2.71e-10!29;UBERON:0003528!2.71e-10!29;UBERON:0001893!2.71e-10!29;UBERON:0002780!2.91e-10!39;UBERON:0001890!2.91e-10!39;UBERON:0006240!2.91e-10!39;UBERON:0002021!7.28e-09!10;UBERON:0000411!7.28e-09!10;UBERON:0001950!7.28e-09!10;UBERON:0007811!2.89e-08!86;UBERON:0000153!8.77e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.23e-30,64;UBERON:0003075,5.23e-30,64;UBERON:0007284,5.23e-30,64;UBERON:0001017,6.11e-29,73;UBERON:0001016,7.77e-28,75;UBERON:0004121,1.54e-26,95;UBERON:0000924,1.54e-26,95;UBERON:0006601,1.54e-26,95;UBERON:0000073,4.03e-26,54;UBERON:0010371,7.71e-25,73;UBERON:0001049,1.03e-23,52;UBERON:0005068,1.03e-23,52;UBERON:0006241,1.03e-23,52;UBERON:0007135,1.03e-23,52;UBERON:0002020,1.39e-21,34;UBERON:0000955,5.80e-19,47;UBERON:0006238,5.80e-19,47;UBERON:0003056,7.65e-18,49;UBERON:0002616,8.08e-18,46;UBERON:0010314,2.72e-17,92;UBERON:0003528,1.65e-16,29;UBERON:0002791,1.65e-16,29;UBERON:0001893,1.65e-16,29;UBERON:0002021,7.51e-16,10;UBERON:0000411,7.51e-16,10;UBERON:0001950,7.51e-16,10;UBERON:0003080,1.26e-14,40;UBERON:0002780,1.34e-13,39;UBERON:0001890,1.34e-13,39;UBERON:0006240,1.34e-13,39;UBERON:0003076,2.30e-10,12;UBERON:0003057,2.30e-10,12;UBERON:0000025,2.36e-10,114;UBERON:0002619,7.07e-10,17;UBERON:0002420,9.94e-10,8;UBERON:0007245,9.94e-10,8;UBERON:0010009,9.94e-10,8;UBERON:0010011,9.94e-10,8;UBERON:0000454,9.94e-10,8;UBERON:0004111,5.40e-09,122;UBERON:0000956,5.41e-09,21;UBERON:0001869,5.41e-09,21;UBERON:0000203,5.41e-09,21;UBERON:0002240,9.58e-08,6;UBERON:0005174,9.58e-08,6;UBERON:0001137,9.58e-08,6;UBERON:0000483,1.51e-07,174;UBERON:0000119,2.52e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.9320347117916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,3.14216082844184,3.53389665522582,0,0.287536413054709,0,9.91042928994498,6.2566795661742,7.68032666281217,1.18697658957174,2.19570344645783,2.6045668527838,4.18774498502071,5.6276261003168,6.41752640662602,4.71405736757868,4.12877874317399,2.42319279572891,0,0,0,0,0,1.61910957491345,2.59910566979068,1.34408066129201,8.14577636764161,0,0,0,0.14084341977668,0,0,0,0,0,0,8.79215873836762,0,0.148442139064825,0,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0.484875253135222,0,26.6430525280508,18.6407569063975,0,0,0,0,9.8861822007183,14.1825186873774,1.38219787324151,15.8180131374972,17.9000820131231,6.64921742590592,8.27430441645564,0.305518091550949,1.61729061793121,3.79084137650512,1.26265113531884,0.520481771850815,0.229902104433473,1.44049703844279,0.452114453507145,1.42876648217788,1.2811372028485,1.12442069471675,5.69147415625834,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,5.25724871410318,0.308713837137853,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0.31399745568275,0.370191491765402,1.1858105083486,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0.538192240565737,0.482443521363367,0,0.37898282354097,0.651859905768103,1.52770577197669,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.81651769963376,5.86058432961016,0,0.252470927204373,1.57754109708128,1.17131623288992,1.93881057959519,0.238968797952552,0,0,0,1.16902343164525,0.395287777946524,16.3873871375122,0.425820255624806,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0.428674070063185,0.177340233642274,0.178368817602071,0.987294123612726,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,567.63878925498,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0,141.56829480404,239.640965206544,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,13.5540442228096,17.4923589872727,13.1765968091061,22.3409137046794,16.4419804744954,23.4172108190807,20.2506750069542,22.9663813644352,23.5634052671786,19.1571315348173,0.207574695168353,0.399024873401031,0.682934423016537,0.729320151204882,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,1.60459604795908,0,0.50695859978048,0.188626341386076,0.936415074698824,0.384150914429216,0.804096565378586,0.952587382566147,0.115884325944855,0.38581844092741,0,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.846984423737976,0.592302255241736,0.365855945745545,0,0.543216455383447,1.12228454331548,0.474540072496697,0.29551344712669,0,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0,0.191288332068843,0.220591419119515,0|short_description=p2@Lin7a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108030 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TUM0,uniprot:Q8JZS0,uniprot:O88951 | |||
|association_with_transcript=-134bp_to_NM_001033223,NM_001039354,uc007gyx.1,uc007gyy.1_5end | |||
|cluster_id=chr10:106708673..106708752,+ | |||
|description=CAGE_peak_2_at_Lin7a_5end | |||
|id=chr10:106708673..106708752,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.18e-08!33;CL:0000047!6.18e-08!33;CL:0000031!6.18e-08!33;CL:0000404!6.18e-08!33;CL:0000117!6.38e-08!23;CL:0000337!6.38e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-13,23;CL:0000337,3.42e-13,23;CL:0000540,1.75e-12,33;CL:0000047,1.75e-12,33;CL:0000031,1.75e-12,33;CL:0000404,1.75e-12,33;CL:0000393,9.94e-10,39;CL:0000211,9.94e-10,39;CL:0002319,2.44e-08,43;CL:0000221,4.93e-08,44;CL:0000133,4.93e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.87e-21!71;UBERON:0003075!3.87e-21!71;UBERON:0007284!3.87e-21!71;UBERON:0000033!4.27e-18!63;UBERON:0001017!6.21e-18!73;UBERON:0005743!6.21e-18!73;UBERON:0004121!7.00e-18!102;UBERON:0000924!7.00e-18!102;UBERON:0006601!7.00e-18!102;UBERON:0000073!8.88e-17!75;UBERON:0001016!8.88e-17!75;UBERON:0001049!5.55e-16!52;UBERON:0005068!5.55e-16!52;UBERON:0006241!5.55e-16!52;UBERON:0007135!5.55e-16!52;UBERON:0000955!3.28e-15!50;UBERON:0006238!3.28e-15!50;UBERON:0002616!1.53e-14!49;UBERON:0003056!3.17e-14!49;UBERON:0002020!5.89e-13!34;UBERON:0003080!7.50e-11!40;UBERON:0002791!2.71e-10!29;UBERON:0003528!2.71e-10!29;UBERON:0001893!2.71e-10!29;UBERON:0002780!2.91e-10!39;UBERON:0001890!2.91e-10!39;UBERON:0006240!2.91e-10!39;UBERON:0002021!7.28e-09!10;UBERON:0000411!7.28e-09!10;UBERON:0001950!7.28e-09!10;UBERON:0007811!2.89e-08!86;UBERON:0000153!8.77e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.23e-30,64;UBERON:0003075,5.23e-30,64;UBERON:0007284,5.23e-30,64;UBERON:0001017,6.11e-29,73;UBERON:0001016,7.77e-28,75;UBERON:0004121,1.54e-26,95;UBERON:0000924,1.54e-26,95;UBERON:0006601,1.54e-26,95;UBERON:0000073,4.03e-26,54;UBERON:0010371,7.71e-25,73;UBERON:0001049,1.03e-23,52;UBERON:0005068,1.03e-23,52;UBERON:0006241,1.03e-23,52;UBERON:0007135,1.03e-23,52;UBERON:0002020,1.39e-21,34;UBERON:0000955,5.80e-19,47;UBERON:0006238,5.80e-19,47;UBERON:0003056,7.65e-18,49;UBERON:0002616,8.08e-18,46;UBERON:0010314,2.72e-17,92;UBERON:0003528,1.65e-16,29;UBERON:0002791,1.65e-16,29;UBERON:0001893,1.65e-16,29;UBERON:0002021,7.51e-16,10;UBERON:0000411,7.51e-16,10;UBERON:0001950,7.51e-16,10;UBERON:0003080,1.26e-14,40;UBERON:0002780,1.34e-13,39;UBERON:0001890,1.34e-13,39;UBERON:0006240,1.34e-13,39;UBERON:0003076,2.30e-10,12;UBERON:0003057,2.30e-10,12;UBERON:0000025,2.36e-10,114;UBERON:0002619,7.07e-10,17;UBERON:0002420,9.94e-10,8;UBERON:0007245,9.94e-10,8;UBERON:0010009,9.94e-10,8;UBERON:0010011,9.94e-10,8;UBERON:0000454,9.94e-10,8;UBERON:0004111,5.40e-09,122;UBERON:0000956,5.41e-09,21;UBERON:0001869,5.41e-09,21;UBERON:0000203,5.41e-09,21;UBERON:0002240,9.58e-08,6;UBERON:0005174,9.58e-08,6;UBERON:0001137,9.58e-08,6;UBERON:0000483,1.51e-07,174;UBERON:0000119,2.52e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.9320347117916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,3.14216082844184,3.53389665522582,0,0.287536413054709,0,9.91042928994498,6.2566795661742,7.68032666281217,1.18697658957174,2.19570344645783,2.6045668527838,4.18774498502071,5.6276261003168,6.41752640662602,4.71405736757868,4.12877874317399,2.42319279572891,0,0,0,0,0,1.61910957491345,2.59910566979068,1.34408066129201,8.14577636764161,0,0,0,0.14084341977668,0,0,0,0,0,0,8.79215873836762,0,0.148442139064825,0,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0.484875253135222,0,26.6430525280508,18.6407569063975,0,0,0,0,9.8861822007183,14.1825186873774,1.38219787324151,15.8180131374972,17.9000820131231,6.64921742590592,8.27430441645564,0.305518091550949,1.61729061793121,3.79084137650512,1.26265113531884,0.520481771850815,0.229902104433473,1.44049703844279,0.452114453507145,1.42876648217788,1.2811372028485,1.12442069471675,5.69147415625834,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,5.25724871410318,0.308713837137853,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0.31399745568275,0.370191491765402,1.1858105083486,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0.538192240565737,0.482443521363367,0,0.37898282354097,0.651859905768103,1.52770577197669,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.81651769963376,5.86058432961016,0,0.252470927204373,1.57754109708128,1.17131623288992,1.93881057959519,0.238968797952552,0,0,0,1.16902343164525,0.395287777946524,16.3873871375122,0.425820255624806,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0.428674070063185,0.177340233642274,0.178368817602071,0.987294123612726,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,567.63878925498,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0,141.56829480404,239.640965206544,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,13.5540442228096,17.4923589872727,13.1765968091061,22.3409137046794,16.4419804744954,23.4172108190807,20.2506750069542,22.9663813644352,23.5634052671786,19.1571315348173,0.207574695168353,0.399024873401031,0.682934423016537,0.729320151204882,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,1.60459604795908,0,0.50695859978048,0.188626341386076,0.936415074698824,0.384150914429216,0.804096565378586,0.952587382566147,0.115884325944855,0.38581844092741,0,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.846984423737976,0.592302255241736,0.365855945745545,0,0.543216455383447,1.12228454331548,0.474540072496697,0.29551344712669,0,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@Lin7a | |||
}} |
Revision as of 20:03, 3 August 2015
Short description: | p2@Lin7a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lin7a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -134bp_to_NM_001033223, NM_001039354, uc007gyx.1, uc007gyy.1_5end |
EntrezGene: | 108030 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.42e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.42e-13 | 23 |
neuron | 1.75e-12 | 33 |
neuronal stem cell | 1.75e-12 | 33 |
neuroblast | 1.75e-12 | 33 |
electrically signaling cell | 1.75e-12 | 33 |
electrically responsive cell | 9.94e-10 | 39 |
electrically active cell | 9.94e-10 | 39 |
neural cell | 2.44e-08 | 43 |
ectodermal cell | 4.93e-08 | 44 |
neurectodermal cell | 4.93e-08 | 44 |