FFCP PHASE1:Hg19::chr2:233385210..233385225,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39433 | |||
|TSSclassifier=strong | |||
|UniProt=P0CW18 | |||
|association_with_transcript=37bp_to_NM_001195129_5end | |||
|coexpression_cluster_id=C541 | |||
|description=CAGE_peak_5_at_PRSS56_5end | |||
|id=chr2:233385210..233385225,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.88e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.49e-47;29 | |||
|ontology_enrichment_disease=DOID:305!1.74e-17!106;DOID:0050687!5.28e-14!143;DOID:3119!1.25e-09!14;DOID:162!1.34e-09!235;DOID:14566!2.49e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.53e-18,106;DOID:0050687,1.80e-15,143;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.39e-74!9;UBERON:0001557!1.01e-34!19;UBERON:0008947!9.12e-21!38;UBERON:0003258!9.12e-21!38;UBERON:0000072!6.95e-17!46;UBERON:0000065!1.90e-14!53;UBERON:0000063!1.78e-10!97;UBERON:0001041!2.65e-10!98;UBERON:0001004!3.23e-10!72;UBERON:0004913!2.46e-09!1;UBERON:0003703!2.46e-09!1;UBERON:0001174!2.46e-09!1;UBERON:0004914!2.46e-09!1;UBERON:0000077!1.20e-08!130;UBERON:0004921!1.20e-08!129;UBERON:0004185!1.20e-08!129;UBERON:0001007!7.84e-07!155;UBERON:0001555!7.84e-07!155;UBERON:0007026!7.84e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.13e-125;9!UBERON:0001557;7.13e-125;9!UBERON:0000072;5.56e-34;37!UBERON:0000065;9.59e-30;44!UBERON:0001004;1.17e-13;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.15e-125,9;UBERON:0001557,6.82e-59,19;UBERON:0008947,4.20e-36,38;UBERON:0003258,4.20e-36,38;UBERON:0000072,4.98e-29,47;UBERON:0000065,3.75e-25,54;UBERON:0001004,4.21e-18,74;UBERON:0001041,2.99e-15,87;UBERON:0004921,7.19e-11,118;UBERON:0001007,1.18e-08,145;UBERON:0001555,1.18e-08,145;UBERON:0007026,1.18e-08,145;UBERON:0001048,8.46e-08,160;UBERON:0004119,9.61e-08,160;UBERON:0000925,9.61e-08,160;UBERON:0006595,9.61e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,3.07597680103594,4.72037132218685,4.09718750801919,4.41175890929576,4.57546832594053,4.98268300133303,4.04493924480493,4.12065076763227,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.035434994815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5311921281736,0,0,0,0,0,0,0,0,0,7.51675398281032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,7.16222790580926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@PRSS56 | |||
}} |
Revision as of 09:14, 21 January 2014
Short description: | p5@PRSS56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRSS56_5end |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | 37bp_to_NM_001195129_5end |
EntrezGene: | PRSS56 |
HGNC: | 39433 |
UniProt: | P0CW18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.88e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.15e-125 | 9 |
upper respiratory tract | 6.82e-59 | 19 |
respiratory primordium | 4.20e-36 | 38 |
endoderm of foregut | 4.20e-36 | 38 |
segment of respiratory tract | 4.98e-29 | 47 |
respiratory tract | 3.75e-25 | 54 |
respiratory system | 4.21e-18 | 74 |
foregut | 2.99e-15 | 87 |
subdivision of digestive tract | 7.19e-11 | 118 |
digestive system | 1.18e-08 | 145 |
digestive tract | 1.18e-08 | 145 |
primitive gut | 1.18e-08 | 145 |
primordium | 8.46e-08 | 160 |
endoderm-derived structure | 9.61e-08 | 160 |
endoderm | 9.61e-08 | 160 |
presumptive endoderm | 9.61e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.53e-18 | 106 |
cell type cancer | 1.80e-15 | 143 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |