FFCP PHASE1:Hg19::chr2:56410948..56411039,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29400 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PX6 | |||
|association_with_transcript=-218bp_to_ENST00000407595,NM_001080433,uc002rzn.2_5end | |||
|coexpression_cluster_id=C4238 | |||
|description=CAGE_peak_2_at_CCDC85A_5end | |||
|id=chr2:56410948..56411039,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.36e-07!24;CL:0000222!5.46e-07!119;CL:0000213!9.13e-07!57;CL:0000215!9.13e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.33e-07;24!CL:0000071;4.75e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.10e-07,15;CL:0002139,2.76e-07,24;CL:0000115,4.26e-07,36;CL:0000071,5.87e-07,18;CL:0002546,5.87e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.43e-07;82!CL:0002546;4.75e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-28!115;UBERON:0000025!9.25e-24!194;UBERON:0001049!3.53e-22!57;UBERON:0005068!3.53e-22!57;UBERON:0006241!3.53e-22!57;UBERON:0007135!3.53e-22!57;UBERON:0003075!5.21e-21!86;UBERON:0007284!5.21e-21!86;UBERON:0004111!3.84e-20!241;UBERON:0000955!3.11e-19!69;UBERON:0006238!3.11e-19!69;UBERON:0002346!8.96e-19!90;UBERON:0005743!3.16e-18!86;UBERON:0002616!3.58e-18!59;UBERON:0000477!2.73e-17!286;UBERON:0001017!3.14e-17!82;UBERON:0003080!5.59e-17!42;UBERON:0002780!2.17e-16!41;UBERON:0001890!2.17e-16!41;UBERON:0006240!2.17e-16!41;UBERON:0000073!5.48e-16!94;UBERON:0001016!5.48e-16!94;UBERON:0000475!1.18e-15!365;UBERON:0001893!1.96e-15!34;UBERON:0000483!1.99e-15!309;UBERON:0002619!2.06e-15!22;UBERON:0002020!4.13e-15!34;UBERON:0003528!4.13e-15!34;UBERON:0000119!9.43e-15!312;UBERON:0002791!1.02e-14!33;UBERON:0001950!1.69e-14!20;UBERON:0001869!2.40e-14!32;UBERON:0003056!1.05e-13!61;UBERON:0001981!2.01e-12!60;UBERON:0007500!2.01e-12!60;UBERON:0004537!2.01e-12!60;UBERON:0006965!2.01e-12!60;UBERON:0000956!2.83e-12!25;UBERON:0000203!2.83e-12!25;UBERON:0000468!3.33e-12!659;UBERON:0000055!5.54e-12!69;UBERON:0004872!7.02e-12!84;UBERON:0002049!9.94e-11!79;UBERON:0007798!9.94e-11!79;UBERON:0000033!4.24e-10!123;UBERON:0000153!4.27e-10!129;UBERON:0007811!4.27e-10!129;UBERON:0000481!1.42e-09!347;UBERON:0000064!4.25e-09!219;UBERON:0001009!2.12e-08!113;UBERON:0000467!4.76e-08!625;UBERON:0000480!6.51e-08!626;UBERON:0004121!1.06e-07!169;UBERON:0001637!1.07e-07!42;UBERON:0003509!1.07e-07!42;UBERON:0004572!1.07e-07!42;UBERON:0004535!1.12e-07!110;UBERON:0000924!5.97e-07!173;UBERON:0006601!5.97e-07!173;UBERON:0003914!6.41e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.51e-21;22!UBERON:0001950;5.70e-20;20!UBERON:0001893;6.26e-18;34!UBERON:0000956;1.09e-17;25!UBERON:0000203;1.09e-17;25!UBERON:0001869;2.40e-17;32!UBERON:0003528;3.78e-17;34!UBERON:0002020;3.78e-17;34!UBERON:0002791;3.86e-17;32!UBERON:0002780;1.49e-14;41!UBERON:0001890;1.49e-14;41!UBERON:0000073;6.91e-14;53!UBERON:0002616;6.91e-14;53!UBERON:0001017;3.17e-09;75!UBERON:0000955;5.62e-09;68!UBERON:0007023;3.36e-08;114!UBERON:0001016;5.93e-08;83!UBERON:0000200;7.02e-08;6!UBERON:0007500;3.06e-07;56!UBERON:0001981;3.06e-07;56!UBERON:0004537;3.06e-07;56!UBERON:0004638;4.75e-07;18!UBERON:0001986;4.75e-07;18!UBERON:0004852;4.75e-07;18!UBERON:0010260;5.68e-07;9!UBERON:0002021;8.62e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.72e-26,114;UBERON:0001049,1.92e-25,56;UBERON:0005068,1.92e-25,56;UBERON:0006241,1.92e-25,56;UBERON:0007135,1.92e-25,56;UBERON:0000025,7.08e-25,192;UBERON:0000073,8.24e-23,53;UBERON:0002616,8.24e-23,53;UBERON:0001893,2.49e-21,34;UBERON:0002619,2.67e-21,22;UBERON:0003528,7.17e-21,34;UBERON:0002020,7.17e-21,34;UBERON:0004111,9.35e-21,240;UBERON:0002780,2.85e-20,41;UBERON:0001890,2.85e-20,41;UBERON:0003080,2.85e-20,41;UBERON:0006240,2.85e-20,41;UBERON:0001950,5.06e-20,20;UBERON:0003075,5.58e-20,82;UBERON:0007284,5.58e-20,82;UBERON:0001869,8.42e-20,32;UBERON:0002791,1.48e-19,32;UBERON:0000955,1.86e-19,68;UBERON:0006238,1.86e-19,68;UBERON:0001017,2.98e-18,81;UBERON:0002346,3.19e-18,86;UBERON:0000956,8.62e-18,25;UBERON:0000203,8.62e-18,25;UBERON:0001016,3.69e-16,89;UBERON:0010314,8.45e-15,132;UBERON:0003056,1.44e-13,61;UBERON:0010371,9.62e-13,104;UBERON:0007500,2.30e-12,59;UBERON:0001981,2.30e-12,59;UBERON:0004537,2.30e-12,59;UBERON:0006965,2.30e-12,59;UBERON:0000483,5.62e-12,306;UBERON:0000055,8.12e-12,68;UBERON:0000119,1.45e-11,309;UBERON:0004872,4.22e-11,83;UBERON:0002049,8.57e-09,78;UBERON:0007798,8.57e-09,78;UBERON:0001637,3.83e-08,42;UBERON:0003509,3.83e-08,42;UBERON:0004572,3.83e-08,42;UBERON:0000200,6.87e-08,6;UBERON:0010260,2.81e-07,9;UBERON:0001009,4.66e-07,112;UBERON:0004638,5.87e-07,18;UBERON:0001986,5.87e-07,18;UBERON:0004852,5.87e-07,18;UBERON:0002021,8.32e-07,5 | |||
|phase1_expression=7.26713517082227,4.92431204949261,2.67813367782345,7.00513088471913,4.02264984984559,0.872338524100369,0,1.26343974685366,0,0.491467873003018,2.09340350391728,0,0.527533956456907,1.11389717664042,2.65117900582333,2.01697543935533,0,0,2.92759679274304,0.123121058076788,0.408001382488506,0,0,0,0,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,2.60723734129483,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,3.07800827419625,0,0,0.649094787309367,0.348259474598534,0.531831842075461,0,0,0,1.19257444420023,2.58070378531837,2.77712401286075,2.26123176769604,4.19499436209906,2.75118041940067,2.29894463190492,4.39308490587859,5.33649394030065,2.67776490211736,1.20848795132744,0.760272105718513,0.732186172644509,1.10298924103761,3.24056779152704,2.14319347881791,1.79623498100936,1.57656072676651,0,2.84779697870439,1.09921046358244,0,0,0,1.49091585508596,5.95163404823525,0.264818361626438,2.0078563452417,0.709336764396714,2.80338800071154,1.06748995729705,2.71334303258876,0,0.404132016209064,0.490385709340376,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0.794025282120147,8.79009214875424,2.13557388818567,0.635795703478686,6.00182192168805,2.16410311400722,4.12224864073007,3.35010341396862,7.93248761533951,5.35903528386592,8.07788077581166,1.93304787148829,3.87950536365149,3.55009592516614,2.82105875037393,1.86516651541536,0,0,0,0,0,0,0,0,0.36497735907583,0,1.28648187638577,0,0,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.463721619900307,1.05667824812239,0.433099343283221,0,0.190254152234598,0.790204397959275,2.57545848628462,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,5.04159691455333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,2.71310802695722,3.29296134712308,0.325736184293735,0.355391948742546,3.95975936466715,1.20575750823834,0,0.99972991182057,0,0,0,0,3.44585807502342,0,3.18518874668674,3.6985738059069,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,3.0672872929785,1.50051156317903,0.271265023699736,3.95144636908534,3.92543775353756,6.30809660135739,5.97421216462837,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,9.17998888929474,8.28694655755537,6.45518217196069,2.30650468660262,10.2341449813341,3.53878626515936,4.45254199334973,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,1.13733384070897,1.02056223165909,0,4.62681758070868,0.541892875087706,0,0,0,0,0,0,2.3080511260475,1.64007322849853,0.325378394664303,1.95777922130672,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0,0.170453254832202,0.267096106940212,0,0,0,0.10115778085555,2.78907329578371,3.1481234683064,1.3940745403212,0.616067160352178,2.66153015158511,0,0.55597265731176,2.00374841438788,0,0.316379424718726,0.762520775695299,0,0,0,0,0.719489830333259,1.09814811894422,1.41374882814824,1.41527737101321,0,0,0.975267478179181,0.731140468893853,0,0.136499911407986,0.141405431953713,0,1.10273068709225,3.3171948762061,3.5076070820301,0,0,4.05820753925408,6.50629346009475,1.97186921772569,3.29846110069318,2.94747123039363,3.92338156629375,0,0.211107635297664,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,7.17890078432281,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,6.95903353436409,5.90811548924153,0,0,0.211125408127993,1.39473591775749,0.552567831062295,0.251932747854276,0.20453736500431,0,0.933118762985422,0,0.179021174675609,0,0.394573622547734,0,0,3.87733098438087,8.07082454008106,11.9768278800717,0,0.0874599999961957,4.34999745260876,0,0,2.6002644994473,0.344743373241465,0,4.86149985813218,0.885741385813839,3.13550740426061,3.05163472634166,4.53374965718021,1.47773809476774,8.33664509185096,0,2.23077990845765,2.92410982314429,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,1.14994833854341,0.611030144933625,0.593042257361244,0.370691816839509,0.104421949505455,3.70706231393724,4.01288823649394,3.74823113160543,0,0,0,2.36750641709634,0,5.20323694771833,0.947798694427319,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,2.71176888936639,0,0,12.4722268033081,0.195551382734803,0.160317640503067,1.49417096317547,0,0,0.229073192331831,4.46146994441108,0,0.124252535565433,0,1.35904206073614,1.46443984837266,0,0.577901179803038,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| |||
|short_description=p2@CCDC85A | |||
}} |
Revision as of 03:18, 21 January 2014
Short description: | p2@CCDC85A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC85A_5end |
Coexpression cluster: | C4238_brain_nonsmall_spinal_Olfactory_insula_frontal_temporal |
Association with transcript: | -218bp_to_ENST00000407595, NM_001080433, uc002rzn.2_5end |
EntrezGene: | CCDC85A |
HGNC: | 29400 |
UniProt: | Q96PX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.10e-07 | 15 |
endothelial cell of vascular tree | 2.76e-07 | 24 |
endothelial cell | 4.26e-07 | 36 |
blood vessel endothelial cell | 5.87e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.87e-07 | 18 |