FFCP PHASE1:Hg19::chr2:97652309..97652322,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51252 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28036 | |||
|TSSclassifier=strong | |||
|UniProt=E9PD86 | |||
|association_with_transcript=6bp_to_ENST00000490605_5end | |||
|coexpression_cluster_id=C4254 | |||
|description=CAGE_peak_1_at_FAM178B_5end | |||
|id=chr2:97652309..97652322,- | |||
|ontology_enrichment_celltype=CL:0000148!4.49e-12!10;CL:0000541!4.49e-12!10;CL:0002567!9.35e-11!3;CL:0000039!6.12e-10!7;CL:0000586!6.12e-10!7;CL:0002566!5.28e-09!1;CL:0000147!1.15e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002566;1.97e-11;1!CL:0000148;1.75e-09;10!CL:0000147;6.50e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.78e-11,1;CL:0000148,1.67e-09,10;CL:0000541,1.67e-09,10;CL:0000147,6.30e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.09e-09;10!UBERON:0005564;1.09e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;5.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.15e-08,106;DOID:1749,5.45e-07,14;DOID:0050687,7.54e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.98e-15!8;UBERON:0003135!3.85e-11!11;UBERON:0000997!4.52e-09!1;UBERON:0005056!4.52e-09!1;UBERON:0001282!1.05e-08!1;UBERON:0009842!1.05e-08!1;UBERON:0003704!1.05e-08!1;UBERON:0001171!1.05e-08!1;UBERON:0001172!1.05e-08!1;UBERON:0007029!1.53e-08!1;UBERON:0004176!2.01e-08!22;UBERON:0001280!2.99e-08!4;UBERON:0004647!2.99e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001280;7.51e-14;3!UBERON:0004647;7.51e-14;3!UBERON:0000473;5.61e-12;8!UBERON:0000997;1.52e-11;1!UBERON:0005056;1.52e-11;1!UBERON:0004176;1.52e-11;1!UBERON:0001282;5.16e-11;1!UBERON:0009842;5.16e-11;1!UBERON:0003704;5.16e-11;1!UBERON:0001171;5.16e-11;1!UBERON:0001172;5.16e-11;1!UBERON:0003135;7.47e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001280,7.51e-14,3;UBERON:0004647,7.51e-14,3;UBERON:0005171,7.51e-14,3;UBERON:0000473,5.72e-12,8;UBERON:0000997,1.45e-11,1;UBERON:0005056,1.45e-11,1;UBERON:0001282,4.44e-11,1;UBERON:0009842,4.44e-11,1;UBERON:0003704,4.44e-11,1;UBERON:0001171,4.44e-11,1;UBERON:0001172,4.44e-11,1;UBERON:0002294,2.57e-10,9;UBERON:0001173,2.57e-10,9;UBERON:0004912,2.57e-10,9;UBERON:0003135,7.57e-09,11;UBERON:0004176,1.40e-07,22;UBERON:0002394,2.26e-07,6;UBERON:0003928,2.26e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95283575478919,0.381988425558278,3.51652341630141,0,1.7480673759565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01131113011436,0,0,0,0,7.48562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93701494939902,0,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29158946037639,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96587634930675,0,3.79638258206047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6971080146028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19498765685643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,6.79332796050031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,3.50990555009325,4.84983668596732,9.37874455546625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.17855174548353,0,0,0,0,0,0,0,0 | |||
|short_description=p1@FAM178B | |||
}} |
Revision as of 04:31, 21 January 2014
Short description: | p1@FAM178B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM178B_5end |
Coexpression cluster: | C4254_melanoma_transitionalcell_testis_adenocarcinoma_small_testicular_epidermoid |
Association with transcript: | 6bp_to_ENST00000490605_5end |
EntrezGene: | FAM178B |
HGNC: | 28036 |
UniProt: | E9PD86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.78e-11 | 1 |
melanocyte | 1.67e-09 | 10 |
melanoblast | 1.67e-09 | 10 |
pigment cell | 6.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
liver parenchyma | 7.51e-14 | 3 |
liver lobule | 7.51e-14 | 3 |
hepatic duct | 7.51e-14 | 3 |
testis | 5.72e-12 | 8 |
mammalian vulva | 1.45e-11 | 1 |
external female genitalia | 1.45e-11 | 1 |
intralobular bile duct | 4.44e-11 | 1 |
acinus | 4.44e-11 | 1 |
intrahepatic bile duct | 4.44e-11 | 1 |
portal lobule | 4.44e-11 | 1 |
hepatic acinus | 4.44e-11 | 1 |
biliary system | 2.57e-10 | 9 |
biliary tree | 2.57e-10 | 9 |
biliary bud | 2.57e-10 | 9 |
male reproductive organ | 7.57e-09 | 11 |
external genitalia | 1.40e-07 | 22 |
bile duct | 2.26e-07 | 6 |
digestive system duct | 2.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.15e-08 | 106 |
squamous cell carcinoma | 5.45e-07 | 14 |
cell type cancer | 7.54e-07 | 143 |