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FFCP PHASE1:Mm9::chr11:68904491..68904511,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:68904491..68904511,+|id=chr11:68904491..68904511,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-07,23;CL:0000337,2.82e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.76e-16!102;UBERON:0000924!2.76e-16!102;UBERON:0006601!2.76e-16!102;UBERON:0001017!6.94e-16!73;UBERON:0005743!6.94e-16!73;UBERON:0002346!1.57e-15!71;UBERON:0003075!1.57e-15!71;UBERON:0007284!1.57e-15!71;UBERON:0000073!9.15e-15!75;UBERON:0001016!9.15e-15!75;UBERON:0001049!2.94e-14!52;UBERON:0005068!2.94e-14!52;UBERON:0006241!2.94e-14!52;UBERON:0007135!2.94e-14!52;UBERON:0000033!9.02e-14!63;UBERON:0000955!1.12e-13!50;UBERON:0006238!1.12e-13!50;UBERON:0002616!4.99e-13!49;UBERON:0003056!2.74e-11!49;UBERON:0002020!2.90e-11!34;UBERON:0003080!4.65e-10!40;UBERON:0002780!1.59e-09!39;UBERON:0001890!1.59e-09!39;UBERON:0006240!1.59e-09!39;UBERON:0002791!5.74e-09!29;UBERON:0003528!5.74e-09!29;UBERON:0001893!5.74e-09!29;UBERON:0007811!1.66e-08!86;UBERON:0000153!5.54e-08!94;UBERON:0000468!6.95e-08!333;UBERON:0002021!1.54e-07!10;UBERON:0000411!1.54e-07!10;UBERON:0001950!1.54e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-27,54;UBERON:0001049,9.59e-25,52;UBERON:0005068,9.59e-25,52;UBERON:0006241,9.59e-25,52;UBERON:0007135,9.59e-25,52;UBERON:0001017,2.07e-24,73;UBERON:0001016,1.85e-23,75;UBERON:0002346,1.92e-22,64;UBERON:0003075,1.92e-22,64;UBERON:0007284,1.92e-22,64;UBERON:0002020,1.73e-20,34;UBERON:0000955,3.99e-20,47;UBERON:0006238,3.99e-20,47;UBERON:0010371,1.11e-19,73;UBERON:0004121,1.70e-19,95;UBERON:0000924,1.70e-19,95;UBERON:0006601,1.70e-19,95;UBERON:0002616,8.30e-19,46;UBERON:0003080,4.00e-17,40;UBERON:0002780,5.58e-16,39;UBERON:0001890,5.58e-16,39;UBERON:0006240,5.58e-16,39;UBERON:0002021,1.85e-15,10;UBERON:0000411,1.85e-15,10;UBERON:0001950,1.85e-15,10;UBERON:0003528,2.15e-15,29;UBERON:0002791,2.15e-15,29;UBERON:0001893,2.15e-15,29;UBERON:0003056,3.39e-15,49;UBERON:0010314,1.41e-14,92;UBERON:0002619,5.15e-12,17;UBERON:0000956,6.31e-11,21;UBERON:0001869,6.31e-11,21;UBERON:0000203,6.31e-11,21;UBERON:0003076,2.60e-08,12;UBERON:0003057,2.60e-08,12;UBERON:0002240,1.16e-07,6;UBERON:0005174,1.16e-07,6;UBERON:0001137,1.16e-07,6;UBERON:0000025,5.10e-07,114;UBERON:0001948,8.87e-07,5;UBERON:0002315,8.87e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0,0.202475267389826,0,0.315462165358238,0,0,1.53077922271926,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.304130793658544,0,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0.514518872071894,0,0.515672092277442,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0.449949858640699,0,1.4209602298922,0.599200221036809,0.768436610643109,0.207379224616955,0,0.420649922702764,1.14260393761521,1.32521124570968,0.367472397644862,0.191690942036473,0,1.10115880999389,2.17068474744819,2.91852413186863,0.923204014111357,1.00636407962651,1.04182674111352,1.67509799400829,0.56276261003168,1.5279824777681,1.47314292736834,1.99320353118744,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0,1.99900802130698,0.251333182659351,0.741584903203122,0.578397427679647,0,0.323533699894818,0,0.484875253135222,0,2.04946557908083,47.1255090330274,1.02182822083437,0,0,0,2.69623150928681,3.66000482254901,1.50785222535437,3.82413504423008,5.11430914660661,2.90903262383384,2.27137768294861,0.407357455401265,0.497627882440372,0.758168275301024,1.05220927943237,0.520481771850815,0.229902104433473,0.180062129805349,0.753524089178575,0.816437989815934,0.512454881139399,0.468508622798644,1.55222022443409,0,0.189106080167819,0,0.657587197282725,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0.469052119962192,0,1.18372367792605,0,0.308534225774757,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.492502392237286,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,5.25724871410318,2.36680608472354,0.330418782983798,0.793351699990633,0.213288250535234,0.232236671860439,0.128867461322093,0.80673409849337,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0,1.16978452271472,6.29173586057955,1.08069024937347,0.398282546508734,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.631222379012867,0.442655759869801,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0.3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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=42
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr11:68904491..68904511,+
|description=CAGE_peak_at_chr11:68904491..68904511,+
|id=chr11:68904491..68904511,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-07,23;CL:0000337,2.82e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.76e-16!102;UBERON:0000924!2.76e-16!102;UBERON:0006601!2.76e-16!102;UBERON:0001017!6.94e-16!73;UBERON:0005743!6.94e-16!73;UBERON:0002346!1.57e-15!71;UBERON:0003075!1.57e-15!71;UBERON:0007284!1.57e-15!71;UBERON:0000073!9.15e-15!75;UBERON:0001016!9.15e-15!75;UBERON:0001049!2.94e-14!52;UBERON:0005068!2.94e-14!52;UBERON:0006241!2.94e-14!52;UBERON:0007135!2.94e-14!52;UBERON:0000033!9.02e-14!63;UBERON:0000955!1.12e-13!50;UBERON:0006238!1.12e-13!50;UBERON:0002616!4.99e-13!49;UBERON:0003056!2.74e-11!49;UBERON:0002020!2.90e-11!34;UBERON:0003080!4.65e-10!40;UBERON:0002780!1.59e-09!39;UBERON:0001890!1.59e-09!39;UBERON:0006240!1.59e-09!39;UBERON:0002791!5.74e-09!29;UBERON:0003528!5.74e-09!29;UBERON:0001893!5.74e-09!29;UBERON:0007811!1.66e-08!86;UBERON:0000153!5.54e-08!94;UBERON:0000468!6.95e-08!333;UBERON:0002021!1.54e-07!10;UBERON:0000411!1.54e-07!10;UBERON:0001950!1.54e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-27,54;UBERON:0001049,9.59e-25,52;UBERON:0005068,9.59e-25,52;UBERON:0006241,9.59e-25,52;UBERON:0007135,9.59e-25,52;UBERON:0001017,2.07e-24,73;UBERON:0001016,1.85e-23,75;UBERON:0002346,1.92e-22,64;UBERON:0003075,1.92e-22,64;UBERON:0007284,1.92e-22,64;UBERON:0002020,1.73e-20,34;UBERON:0000955,3.99e-20,47;UBERON:0006238,3.99e-20,47;UBERON:0010371,1.11e-19,73;UBERON:0004121,1.70e-19,95;UBERON:0000924,1.70e-19,95;UBERON:0006601,1.70e-19,95;UBERON:0002616,8.30e-19,46;UBERON:0003080,4.00e-17,40;UBERON:0002780,5.58e-16,39;UBERON:0001890,5.58e-16,39;UBERON:0006240,5.58e-16,39;UBERON:0002021,1.85e-15,10;UBERON:0000411,1.85e-15,10;UBERON:0001950,1.85e-15,10;UBERON:0003528,2.15e-15,29;UBERON:0002791,2.15e-15,29;UBERON:0001893,2.15e-15,29;UBERON:0003056,3.39e-15,49;UBERON:0010314,1.41e-14,92;UBERON:0002619,5.15e-12,17;UBERON:0000956,6.31e-11,21;UBERON:0001869,6.31e-11,21;UBERON:0000203,6.31e-11,21;UBERON:0003076,2.60e-08,12;UBERON:0003057,2.60e-08,12;UBERON:0002240,1.16e-07,6;UBERON:0005174,1.16e-07,6;UBERON:0001137,1.16e-07,6;UBERON:0000025,5.10e-07,114;UBERON:0001948,8.87e-07,5;UBERON:0002315,8.87e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0,0.202475267389826,0,0.315462165358238,0,0,1.53077922271926,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.304130793658544,0,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0.514518872071894,0,0.515672092277442,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0.449949858640699,0,1.4209602298922,0.599200221036809,0.768436610643109,0.207379224616955,0,0.420649922702764,1.14260393761521,1.32521124570968,0.367472397644862,0.191690942036473,0,1.10115880999389,2.17068474744819,2.91852413186863,0.923204014111357,1.00636407962651,1.04182674111352,1.67509799400829,0.56276261003168,1.5279824777681,1.47314292736834,1.99320353118744,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0,1.99900802130698,0.251333182659351,0.741584903203122,0.578397427679647,0,0.323533699894818,0,0.484875253135222,0,2.04946557908083,47.1255090330274,1.02182822083437,0,0,0,2.69623150928681,3.66000482254901,1.50785222535437,3.82413504423008,5.11430914660661,2.90903262383384,2.27137768294861,0.407357455401265,0.497627882440372,0.758168275301024,1.05220927943237,0.520481771850815,0.229902104433473,0.180062129805349,0.753524089178575,0.816437989815934,0.512454881139399,0.468508622798644,1.55222022443409,0,0.189106080167819,0,0.657587197282725,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0.469052119962192,0,1.18372367792605,0,0.308534225774757,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.492502392237286,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,5.25724871410318,2.36680608472354,0.330418782983798,0.793351699990633,0.213288250535234,0.232236671860439,0.128867461322093,0.80673409849337,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0,1.16978452271472,6.29173586057955,1.08069024937347,0.398282546508734,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.631222379012867,0.442655759869801,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0.325929952884052,0,0.704070744865506,0,0.714130922658041,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.163863314715738,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0,0.80275294993896,1.75817529888305,0.327869890753351,0,0,0.780877488593277,1.29254038639679,0.238968797952552,0,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,8.67567554338879,0.141940085208269,1.06839362200353,0.81443479676788,0.989820737835213,3.98235415019888,0,0.302323556964751,0.377210159511796,0.295301892880773,0,1.03371317267288,0,0,0.948110273807448,0,1.03135543248187,1.70219802876894,0.18006109403131,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,1.8267896946876,1.17335854031855,0,0.220528398054962,0.16488625294148,1.29171541356724,0.422190474497091,0.358117032009409,0.328281799490123,2.33184669303881,1.11255181206306,0.341741761595705,0.619160603889667,0.185194527369712,0.188368457004691,0.546776910884101,0,0,0,0,2.86401185404534,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.743881101528023,0.26175594198403,0.518459893167171,0,0.56369293868419,0.149516546043979,0,0.583353565032143,0.129159823477731,0.506868376472335,0.704143431874524,0.13020438484395,1.15345278868282,0.724752362478018,0.864090018773596,0,0.405450430580328,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0,0.147689527174577,0.605798699688886,0.381034033274999,0.604957110821043,0.292373642219257,0.481059208201647,0.350630706544707,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,2.00628841614145,6.21227026878773,4.60325236507177,4.58316410751517,4.64003592327956,1.37016503954128,1.5107877947794,2.70009000092722,2.70192721934532,2.26571204492102,3.10656187051092,0.103787347584177,1.59609949360412,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.468207537349412,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.436039249896986,0.376437521661322,0.423073039458382,0.182927972872773,0,0,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0,0.749431733813838,0.233931608445408,0.429742108096597,2.10417165275728,0.661774257358546,0.231867835620421
|short_description=p@chr11:68904491..68904511,+
}}

Latest revision as of 09:28, 6 August 2015

Short description:p@chr11:68904491..68904511, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:68904491..68904511, +
Coexpression cluster:MCL_coexpression_mm9:42
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr11:68904491..68904511+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I247.13
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.82e-0723
neuroblast (sensu Vertebrata)2.82e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.78e-2754
neural tube9.59e-2552
neural rod9.59e-2552
future spinal cord9.59e-2552
neural keel9.59e-2552
central nervous system2.07e-2473
nervous system1.85e-2375
neurectoderm1.92e-2264
neural plate1.92e-2264
presumptive neural plate1.92e-2264
gray matter1.73e-2034
brain3.99e-2047
future brain3.99e-2047
ecto-epithelium1.11e-1973
ectoderm-derived structure1.70e-1995
ectoderm1.70e-1995
presumptive ectoderm1.70e-1995
regional part of brain8.30e-1946
anterior neural tube4.00e-1740
regional part of forebrain5.58e-1639
forebrain5.58e-1639
future forebrain5.58e-1639
occipital lobe1.85e-1510
visual cortex1.85e-1510
neocortex1.85e-1510
brain grey matter2.15e-1529
regional part of telencephalon2.15e-1529
telencephalon2.15e-1529
pre-chordal neural plate3.39e-1549
structure with developmental contribution from neural crest1.41e-1492
regional part of cerebral cortex5.15e-1217
cerebral cortex6.31e-1121
cerebral hemisphere6.31e-1121
pallium6.31e-1121
posterior neural tube2.60e-0812
chordal neural plate2.60e-0812
spinal cord1.16e-076
dorsal region element1.16e-076
dorsum1.16e-076
tube5.10e-07114
regional part of spinal cord8.87e-075
gray matter of spinal cord8.87e-075
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