FFCP PHASE1:Hg19::chr3:114061988..114061990,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:114061988..114061990,- | |||
|id=chr3:114061988..114061990,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000056;1.13e-13;4!CL:0000737;1.13e-13;4!CL:0000680;2.18e-08;7!CL:0000188;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.99e-50,1;CL:0002372,3.99e-50,1;CL:0000737,1.13e-13,4;CL:0000515,1.13e-13,4;CL:0000188,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;1.13e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;7.14e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.47e-16!115;UBERON:0001049!5.09e-14!57;UBERON:0005068!5.09e-14!57;UBERON:0006241!5.09e-14!57;UBERON:0007135!5.09e-14!57;UBERON:0000955!7.64e-14!69;UBERON:0006238!7.64e-14!69;UBERON:0002616!2.84e-13!59;UBERON:0001017!5.57e-13!82;UBERON:0002780!6.24e-12!41;UBERON:0001890!6.24e-12!41;UBERON:0006240!6.24e-12!41;UBERON:0005743!6.48e-12!86;UBERON:0003080!1.68e-11!42;UBERON:0000073!9.07e-11!94;UBERON:0001016!9.07e-11!94;UBERON:0002020!1.42e-10!34;UBERON:0003528!1.42e-10!34;UBERON:0002791!6.21e-10!33;UBERON:0001893!1.67e-09!34;UBERON:0003075!2.31e-09!86;UBERON:0007284!2.31e-09!86;UBERON:0002346!2.36e-09!90;UBERON:0000153!1.21e-08!129;UBERON:0007811!1.21e-08!129;UBERON:0000033!2.34e-08!123;UBERON:0001869!7.57e-08!32;UBERON:0000924!3.46e-07!173;UBERON:0006601!3.46e-07!173;UBERON:0004121!4.31e-07!169;UBERON:0002308!7.09e-07!9;UBERON:0000125!7.09e-07!9;UBERON:0003056!9.04e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.99e-50;1!UBERON:0000026;3.99e-50;1!UBERON:0008784;3.99e-50;1!UBERON:0006058;3.99e-50;1!UBERON:0003663;3.99e-50;1!UBERON:0004256;3.99e-50;1!UBERON:0004708;3.99e-50;1!UBERON:0002101;3.99e-50;1!UBERON:0004709;3.99e-50;1!UBERON:0002529;3.99e-50;1!UBERON:0010538;3.99e-50;1!UBERON:0003661;3.99e-50;1!UBERON:0010890;3.99e-50;1!UBERON:0002471;3.99e-50;1!UBERON:0001383;3.99e-50;1!UBERON:0010758;3.99e-50;1!UBERON:0010707;3.99e-50;1!UBERON:0000978;3.99e-50;1!UBERON:0002103;3.99e-50;1!UBERON:0001665;3.99e-50;1!UBERON:0003823;3.99e-50;1!UBERON:0000154;3.99e-50;1!UBERON:0010709;3.99e-50;1!UBERON:0005090;7.14e-26;2!UBERON:0001630;7.14e-26;2!UBERON:0001134;2.07e-13;16!UBERON:0002036;2.07e-13;16!UBERON:0002385;1.21e-07;31!UBERON:0001015;1.21e-07;31!UBERON:0000383;1.21e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.58e-50,1;UBERON:0001389,6.58e-50,1;UBERON:0000026,6.58e-50,1;UBERON:0008784,6.58e-50,1;UBERON:0006058,6.58e-50,1;UBERON:0003663,6.58e-50,1;UBERON:0004256,6.58e-50,1;UBERON:0004708,6.58e-50,1;UBERON:0002101,6.58e-50,1;UBERON:0004709,6.58e-50,1;UBERON:0002529,6.58e-50,1;UBERON:0010538,6.58e-50,1;UBERON:0003661,6.58e-50,1;UBERON:0010890,6.58e-50,1;UBERON:0002471,6.58e-50,1;UBERON:0001383,6.58e-50,1;UBERON:0004357,6.58e-50,1;UBERON:0004347,6.58e-50,1;UBERON:0005420,6.58e-50,1;UBERON:0005732,6.58e-50,1;UBERON:0010758,6.58e-50,1;UBERON:0010707,6.58e-50,1;UBERON:0000978,6.58e-50,1;UBERON:0002103,6.58e-50,1;UBERON:0001665,6.58e-50,1;UBERON:0003823,6.58e-50,1;UBERON:0000154,6.58e-50,1;UBERON:0010709,6.58e-50,1;UBERON:0005733,6.58e-50,1;UBERON:0005730,6.58e-50,1;UBERON:0005090,9.18e-26,2;UBERON:0001630,9.18e-26,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0,0,3.1668811219199,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0.120596438625408,0,0.442317039724898,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.468528891450678,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0.504143392443436,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,1.29485767437579,0,0,0,0,0.198950775161368,0,0,0,0.301925687133347,0,0,0.470317296361523,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.160482733378337,0.730336388246517,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0.106727345877715,1.9307228228694,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr3:114061988..114061990,- | |||
}} |
Revision as of 20:38, 21 January 2014
Short description: | p@chr3:114061988..114061990, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:114061988..114061990, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.99e-50 | 1 |
myotube | 3.99e-50 | 1 |
striated muscle cell | 1.13e-13 | 4 |
skeletal muscle myoblast | 1.13e-13 | 4 |
cell of skeletal muscle | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.58e-50 | 1 |
soleus muscle | 6.58e-50 | 1 |
appendage | 6.58e-50 | 1 |
lower limb segment | 6.58e-50 | 1 |
multi-limb segment region | 6.58e-50 | 1 |
hindlimb muscle | 6.58e-50 | 1 |
hindlimb zeugopod muscle | 6.58e-50 | 1 |
paired limb/fin | 6.58e-50 | 1 |
limb | 6.58e-50 | 1 |
pelvic appendage | 6.58e-50 | 1 |
limb segment | 6.58e-50 | 1 |
paired limb/fin segment | 6.58e-50 | 1 |
limb muscle | 6.58e-50 | 1 |
pelvic complex muscle | 6.58e-50 | 1 |
zeugopod | 6.58e-50 | 1 |
muscle of leg | 6.58e-50 | 1 |
paired limb/fin bud | 6.58e-50 | 1 |
limb bud | 6.58e-50 | 1 |
pelvic appendage bud | 6.58e-50 | 1 |
limb/fin field | 6.58e-50 | 1 |
subdivision of organism along appendicular axis | 6.58e-50 | 1 |
appendage girdle complex | 6.58e-50 | 1 |
leg | 6.58e-50 | 1 |
hindlimb | 6.58e-50 | 1 |
triceps surae | 6.58e-50 | 1 |
hindlimb zeugopod | 6.58e-50 | 1 |
posterior region of body | 6.58e-50 | 1 |
pelvic complex | 6.58e-50 | 1 |
limb field | 6.58e-50 | 1 |
hindlimb/pelvic fin field | 6.58e-50 | 1 |
muscle structure | 9.18e-26 | 2 |
muscle organ | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.56e-26 | 2 |