FFCP PHASE1:Mm9::chr12:114665101..114665117,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=320|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114665101..114665117,-|id=chr12:114665101..114665117,-|ontology_enrichment_celltype=CL:0000988!3.87e-11!32;CL:0002032!3.87e-11!32;CL:0000037!3.87e-11!32;CL:0000566!3.87e-11!32;CL:0000837!3.87e-11!32;CL:0000838!1.70e-09!12;CL:0000084!1.66e-08!11;CL:0000827!1.66e-08!11;CL:0000542!1.83e-08!13;CL:0000051!1.83e-08!13;CL:0002031!1.47e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,3.28e-12,32;CL:0002032,3.28e-12,32;CL:0000037,3.28e-12,32;CL:0000837,3.28e-12,32;CL:0002320,8.92e-08,46;CL:0000134,8.92e-08,46;CL:0002031,1.93e-07,25;CL:0000049,3.22e-07,19;CL:0000838,8.44e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.37e-17!48;UBERON:0002390!9.62e-15!45;UBERON:0003061!9.62e-15!45;UBERON:0004177!1.10e-13!29;UBERON:0003408!1.72e-12!24;UBERON:0002405!2.41e-12!70;UBERON:0002370!1.03e-11!23;UBERON:0000974!1.03e-11!23;UBERON:0004807!1.03e-11!23;UBERON:0005058!1.03e-11!23;UBERON:0003351!1.03e-11!23;UBERON:0009113!1.03e-11!23;UBERON:0003295!1.03e-11!23;UBERON:0009722!1.03e-11!23;UBERON:0005562!1.03e-11!23;UBERON:0007690!1.03e-11!23;UBERON:0006562!6.17e-11!24;UBERON:0001557!6.17e-11!24;UBERON:0001042!6.17e-11!24;UBERON:0008814!6.17e-11!24;UBERON:0009145!6.17e-11!24;UBERON:0000072!5.63e-09!27;UBERON:0005057!1.50e-08!51;UBERON:0001004!2.83e-08!42;UBERON:0003081!3.37e-08!88;UBERON:0000065!1.10e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.12e-24,48;UBERON:0002405,1.12e-24,48;UBERON:0002390,1.01e-23,45;UBERON:0003061,1.01e-23,45;UBERON:0003408,2.12e-22,24;UBERON:0004177,7.95e-21,29;UBERON:0005057,7.95e-21,29;UBERON:0002370,2.74e-20,23;UBERON:0000974,2.74e-20,23;UBERON:0004807,2.74e-20,23;UBERON:0005058,2.74e-20,23;UBERON:0003351,2.74e-20,23;UBERON:0009113,2.74e-20,23;UBERON:0003295,2.74e-20,23;UBERON:0009722,2.74e-20,23;UBERON:0005562,2.74e-20,23;UBERON:0007690,2.74e-20,23;UBERON:0006562,2.46e-19,24;UBERON:0001557,2.46e-19,24;UBERON:0001042,2.46e-19,24;UBERON:0008814,2.46e-19,24;UBERON:0009145,2.46e-19,24;UBERON:0000072,6.73e-17,27;UBERON:0000077,9.87e-17,35;UBERON:0007811,5.43e-14,36;UBERON:0001004,1.37e-11,42;UBERON:0000153,2.95e-11,43;UBERON:0003081,2.70e-10,87;UBERON:0000065,3.01e-10,41;UBERON:0002384,8.92e-08,46;UBERON:0003929,5.36e-07,55|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,0.468129052643987,0.513653904676515,0.159544317990673,1.36960583944965,0.0874204024189974,0.666219523631325,0.809901069559304,0,5.67831897644828,5.07323404341233,4.66828616977833,0.0850432901510698,8.63831275447702,8.097193463307,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87239121202077,0.725362142011344,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.76813650941515,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0.289198713839823,0.884610551949874,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0,1.55759661857696,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,2.1066395619397,1.28673953557358,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0.397912944082302,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0,0.482354319504834,0,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,0,0,0,1.19609616558497,0,0.185194527369712,0.188368457004691,1.50363650493128,0.457556346413045,0.509935289981566,0.69975726161829,1.24379976423981,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0,3.79213344753814,0,0.616265742988964,1.42912905275575,1.9692936523423,1.98681354781265,2.64429988943931,2.36303243479324,1.9183625490148,2.28620419965,2.72230699869469,2.0466154955348,1.25075394132428,3.27255326108393,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr12:114665101..114665117,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:114665101..114665117,- | |||
|description=CAGE_peak_at_chr12:114665101..114665117,- | |||
|id=chr12:114665101..114665117,- | |||
|ontology_enrichment_celltype=CL:0000988!3.87e-11!32;CL:0002032!3.87e-11!32;CL:0000037!3.87e-11!32;CL:0000566!3.87e-11!32;CL:0000837!3.87e-11!32;CL:0000838!1.70e-09!12;CL:0000084!1.66e-08!11;CL:0000827!1.66e-08!11;CL:0000542!1.83e-08!13;CL:0000051!1.83e-08!13;CL:0002031!1.47e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.28e-12,32;CL:0002032,3.28e-12,32;CL:0000037,3.28e-12,32;CL:0000837,3.28e-12,32;CL:0002320,8.92e-08,46;CL:0000134,8.92e-08,46;CL:0002031,1.93e-07,25;CL:0000049,3.22e-07,19;CL:0000838,8.44e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.37e-17!48;UBERON:0002390!9.62e-15!45;UBERON:0003061!9.62e-15!45;UBERON:0004177!1.10e-13!29;UBERON:0003408!1.72e-12!24;UBERON:0002405!2.41e-12!70;UBERON:0002370!1.03e-11!23;UBERON:0000974!1.03e-11!23;UBERON:0004807!1.03e-11!23;UBERON:0005058!1.03e-11!23;UBERON:0003351!1.03e-11!23;UBERON:0009113!1.03e-11!23;UBERON:0003295!1.03e-11!23;UBERON:0009722!1.03e-11!23;UBERON:0005562!1.03e-11!23;UBERON:0007690!1.03e-11!23;UBERON:0006562!6.17e-11!24;UBERON:0001557!6.17e-11!24;UBERON:0001042!6.17e-11!24;UBERON:0008814!6.17e-11!24;UBERON:0009145!6.17e-11!24;UBERON:0000072!5.63e-09!27;UBERON:0005057!1.50e-08!51;UBERON:0001004!2.83e-08!42;UBERON:0003081!3.37e-08!88;UBERON:0000065!1.10e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.12e-24,48;UBERON:0002405,1.12e-24,48;UBERON:0002390,1.01e-23,45;UBERON:0003061,1.01e-23,45;UBERON:0003408,2.12e-22,24;UBERON:0004177,7.95e-21,29;UBERON:0005057,7.95e-21,29;UBERON:0002370,2.74e-20,23;UBERON:0000974,2.74e-20,23;UBERON:0004807,2.74e-20,23;UBERON:0005058,2.74e-20,23;UBERON:0003351,2.74e-20,23;UBERON:0009113,2.74e-20,23;UBERON:0003295,2.74e-20,23;UBERON:0009722,2.74e-20,23;UBERON:0005562,2.74e-20,23;UBERON:0007690,2.74e-20,23;UBERON:0006562,2.46e-19,24;UBERON:0001557,2.46e-19,24;UBERON:0001042,2.46e-19,24;UBERON:0008814,2.46e-19,24;UBERON:0009145,2.46e-19,24;UBERON:0000072,6.73e-17,27;UBERON:0000077,9.87e-17,35;UBERON:0007811,5.43e-14,36;UBERON:0001004,1.37e-11,42;UBERON:0000153,2.95e-11,43;UBERON:0003081,2.70e-10,87;UBERON:0000065,3.01e-10,41;UBERON:0002384,8.92e-08,46;UBERON:0003929,5.36e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,0.468129052643987,0.513653904676515,0.159544317990673,1.36960583944965,0.0874204024189974,0.666219523631325,0.809901069559304,0,5.67831897644828,5.07323404341233,4.66828616977833,0.0850432901510698,8.63831275447702,8.097193463307,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87239121202077,0.725362142011344,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.76813650941515,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0.289198713839823,0.884610551949874,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0,1.55759661857696,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,2.1066395619397,1.28673953557358,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0.397912944082302,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0,0.482354319504834,0,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,0,0,0,1.19609616558497,0,0.185194527369712,0.188368457004691,1.50363650493128,0.457556346413045,0.509935289981566,0.69975726161829,1.24379976423981,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0,3.79213344753814,0,0.616265742988964,1.42912905275575,1.9692936523423,1.98681354781265,2.64429988943931,2.36303243479324,1.9183625490148,2.28620419965,2.72230699869469,2.0466154955348,1.25075394132428,3.27255326108393,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr12:114665101..114665117,- | |||
}} |
Latest revision as of 19:54, 4 August 2015
Short description: | p@chr12:114665101..114665117, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114665101..114665117, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.28e-12 | 32 |
hematopoietic oligopotent progenitor cell | 3.28e-12 | 32 |
hematopoietic stem cell | 3.28e-12 | 32 |
hematopoietic multipotent progenitor cell | 3.28e-12 | 32 |
connective tissue cell | 8.92e-08 | 46 |
mesenchymal cell | 8.92e-08 | 46 |
hematopoietic lineage restricted progenitor cell | 1.93e-07 | 25 |
common myeloid progenitor | 3.22e-07 | 19 |
lymphoid lineage restricted progenitor cell | 8.44e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.12e-24 | 48 |
immune system | 1.12e-24 | 48 |
hematopoietic system | 1.01e-23 | 45 |
blood island | 1.01e-23 | 45 |
gland of gut | 2.12e-22 | 24 |
hemopoietic organ | 7.95e-21 | 29 |
immune organ | 7.95e-21 | 29 |
thymus | 2.74e-20 | 23 |
neck | 2.74e-20 | 23 |
respiratory system epithelium | 2.74e-20 | 23 |
hemolymphoid system gland | 2.74e-20 | 23 |
pharyngeal epithelium | 2.74e-20 | 23 |
thymic region | 2.74e-20 | 23 |
pharyngeal gland | 2.74e-20 | 23 |
entire pharyngeal arch endoderm | 2.74e-20 | 23 |
thymus primordium | 2.74e-20 | 23 |
early pharyngeal endoderm | 2.74e-20 | 23 |
pharynx | 2.46e-19 | 24 |
upper respiratory tract | 2.46e-19 | 24 |
chordate pharynx | 2.46e-19 | 24 |
pharyngeal arch system | 2.46e-19 | 24 |
pharyngeal region of foregut | 2.46e-19 | 24 |
segment of respiratory tract | 6.73e-17 | 27 |
mixed endoderm/mesoderm-derived structure | 9.87e-17 | 35 |
craniocervical region | 5.43e-14 | 36 |
respiratory system | 1.37e-11 | 42 |
anterior region of body | 2.95e-11 | 43 |
lateral plate mesoderm | 2.70e-10 | 87 |
respiratory tract | 3.01e-10 | 41 |
connective tissue | 8.92e-08 | 46 |
gut epithelium | 5.36e-07 | 55 |