FFCP PHASE1:Hg19::chr3:185300358..185300377,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23116 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQ42 | |||
|association_with_transcript=-129bp_to_ENST00000545472,uc011brv.1_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_6_at_SENP2_5end | |||
|id=chr3:185300358..185300377,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.13e-58!5;CL:0000039!8.55e-28!7;CL:0000586!8.55e-28!7;CL:0000540!6.31e-18!6;CL:0000031!6.31e-18!6;CL:0000404!6.31e-18!6;CL:0000047!1.32e-13!8;CL:0000148!4.02e-11!10;CL:0000541!4.02e-11!10;CL:0000147!4.27e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.22e-65;5!CL:0000039;2.84e-31;7!CL:0000586;2.84e-31;7!CL:0002321;5.28e-22;15!CL:0000540;3.72e-20;6!CL:0000404;3.72e-20;6!CL:0000148;1.93e-12;10!CL:0000147;4.74e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.33e-66,5;CL:0000039,2.84e-31,7;CL:0000586,2.84e-31,7;CL:0000540,4.11e-20,6;CL:0000031,4.11e-20,6;CL:0000404,4.11e-20,6;CL:0000047,2.96e-15,8;CL:0000148,1.82e-12,10;CL:0000541,1.82e-12,10;CL:0000147,4.55e-09,14;CL:0000133,1.99e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.72e-33;10!UBERON:0005564;1.72e-33;10!CL:0000031;3.72e-20;6 | |||
|ontology_enrichment_disease=DOID:3095!4.06e-19!22;DOID:2994!4.06e-19!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.27e-21;22!DOID:2994;1.27e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.27e-21,22;DOID:2994,1.27e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.29e-24!8;UBERON:0001905!1.22e-23!2;UBERON:0002757!1.22e-23!2;UBERON:0010134!1.22e-23!2;UBERON:0002784!1.22e-23!2;UBERON:0005408!1.22e-23!2;UBERON:0001899!1.22e-23!2;UBERON:0003135!8.20e-18!11;UBERON:0000991!3.69e-14!21;UBERON:0009196!3.69e-14!21;UBERON:0009117!3.69e-14!21;UBERON:0005564!3.69e-14!21;UBERON:0004176!1.63e-13!22;UBERON:0003296!2.49e-12!4;UBERON:0010133!2.49e-12!4;UBERON:0003101!5.05e-09!22;UBERON:0000079!5.05e-09!22;UBERON:0001894!1.98e-07!7;UBERON:0006222!1.98e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.03e-27;8!UBERON:0003135;4.79e-20;11!UBERON:0000991;5.42e-16;21!UBERON:0000922;2.40e-13;49!UBERON:0003101;3.64e-10;22!UBERON:0000079;3.64e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.03e-27,8;UBERON:0003135,4.79e-20,11;UBERON:0000991,5.42e-16,21;UBERON:0009196,5.42e-16,21;UBERON:0009117,5.42e-16,21;UBERON:0005564,5.42e-16,21;UBERON:0004176,2.89e-15,22;UBERON:0003101,3.64e-10,22;UBERON:0000079,3.64e-10,22;UBERON:0002323,2.85e-07,46;UBERON:0003133,5.80e-07,48;UBERON:0004458,8.08e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39197537197884,10.9999707706833,5.92589108634544,4.76840853070704,7.31730467539322,10.2193660541232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34033500855552,4.67634084430595,5.81616473240859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00933139868063,6.99299660567651,0,16.3182127587171,75.0880908796225,14.8869737246449,14.5410372789578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SENP2 | |||
}} |
Revision as of 23:03, 21 January 2014
Short description: | p6@SENP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SENP2_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -129bp_to_ENST00000545472, uc011brv.1_5end |
EntrezGene: | SENP2 |
HGNC: | 23116 |
UniProt: | B4DQ42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.33e-66 | 5 |
germ line cell | 2.84e-31 | 7 |
germ cell | 2.84e-31 | 7 |
neuron | 4.11e-20 | 6 |
neuroblast | 4.11e-20 | 6 |
electrically signaling cell | 4.11e-20 | 6 |
neuronal stem cell | 2.96e-15 | 8 |
melanocyte | 1.82e-12 | 10 |
melanoblast | 1.82e-12 | 10 |
pigment cell | 4.55e-09 | 14 |
neurectodermal cell | 1.99e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 2.03e-27 | 8 |
male reproductive organ | 4.79e-20 | 11 |
gonad | 5.42e-16 | 21 |
indifferent external genitalia | 5.42e-16 | 21 |
indifferent gonad | 5.42e-16 | 21 |
gonad primordium | 5.42e-16 | 21 |
external genitalia | 2.89e-15 | 22 |
male organism | 3.64e-10 | 22 |
male reproductive system | 3.64e-10 | 22 |
body cavity | 2.85e-07 | 46 |
reproductive organ | 5.80e-07 | 48 |
body cavity or lining | 8.08e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.27e-21 | 22 |
germ cell cancer | 1.27e-21 | 22 |