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FFCP PHASE1:Mm9::chr14:121434378..121434408,+: Difference between revisions

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{{FFCP|EntrezGene=223254|HGNC=|MCL_coexpression_id=459|UniProt=E9Q805|association_with_transcript=-13bp_to_ENSMUST00000135010_5end|description=CAGE_peak_6_at_Farp1_5end|id=chr14:121434378..121434408,+|ontology_enrichment_celltype=CL:0000117!2.95e-14!23;CL:0000337!2.95e-14!23;CL:0000540!2.98e-12!33;CL:0000047!2.98e-12!33;CL:0000031!2.98e-12!33;CL:0000404!2.98e-12!33;CL:0000393!3.11e-10!39;CL:0000211!3.11e-10!39;CL:0002319!6.00e-08!43;CL:0000221!9.47e-08!44;CL:0000133!9.47e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-22,23;CL:0000337,9.16e-22,23;CL:0000540,5.20e-14,33;CL:0000047,5.20e-14,33;CL:0000031,5.20e-14,33;CL:0000404,5.20e-14,33;CL:0000393,1.00e-10,39;CL:0000211,1.00e-10,39;CL:0002319,4.47e-09,43;CL:0000221,1.03e-08,44;CL:0000133,1.03e-08,44;CL:0002609,7.21e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.59e-24!52;UBERON:0005068!8.59e-24!52;UBERON:0006241!8.59e-24!52;UBERON:0007135!8.59e-24!52;UBERON:0001017!1.21e-23!73;UBERON:0005743!1.21e-23!73;UBERON:0000955!9.31e-23!50;UBERON:0006238!9.31e-23!50;UBERON:0000073!1.73e-22!75;UBERON:0001016!1.73e-22!75;UBERON:0002616!5.55e-22!49;UBERON:0002020!9.07e-21!34;UBERON:0003080!1.12e-20!40;UBERON:0002780!3.30e-20!39;UBERON:0001890!3.30e-20!39;UBERON:0006240!3.30e-20!39;UBERON:0003056!3.77e-20!49;UBERON:0000033!4.01e-20!63;UBERON:0002346!4.02e-20!71;UBERON:0003075!4.02e-20!71;UBERON:0007284!4.02e-20!71;UBERON:0002791!1.47e-17!29;UBERON:0003528!1.47e-17!29;UBERON:0001893!1.47e-17!29;UBERON:0004121!2.62e-17!102;UBERON:0000924!2.62e-17!102;UBERON:0006601!2.62e-17!102;UBERON:0000956!1.35e-13!21;UBERON:0001869!1.35e-13!21;UBERON:0000203!1.35e-13!21;UBERON:0002619!2.84e-11!17;UBERON:0000153!5.03e-10!94;UBERON:0007811!5.35e-09!86;UBERON:0000025!4.66e-08!114;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0004111!7.06e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.33e-33,54;UBERON:0002020,2.38e-30,34;UBERON:0001049,1.26e-29,52;UBERON:0005068,1.26e-29,52;UBERON:0006241,1.26e-29,52;UBERON:0007135,1.26e-29,52;UBERON:0001017,3.65e-28,73;UBERON:0001016,5.52e-27,75;UBERON:0000955,2.15e-26,47;UBERON:0006238,2.15e-26,47;UBERON:0003080,3.96e-26,40;UBERON:0002780,2.41e-25,39;UBERON:0001890,2.41e-25,39;UBERON:0006240,2.41e-25,39;UBERON:0002616,3.43e-25,46;UBERON:0003528,6.39e-25,29;UBERON:0002791,6.39e-25,29;UBERON:0001893,6.39e-25,29;UBERON:0002346,1.71e-21,64;UBERON:0003075,1.71e-21,64;UBERON:0007284,1.71e-21,64;UBERON:0000956,1.27e-19,21;UBERON:0001869,1.27e-19,21;UBERON:0000203,1.27e-19,21;UBERON:0003056,3.06e-19,49;UBERON:0004121,5.33e-18,95;UBERON:0000924,5.33e-18,95;UBERON:0006601,5.33e-18,95;UBERON:0010371,3.34e-17,73;UBERON:0002619,1.15e-15,17;UBERON:0002021,1.16e-12,10;UBERON:0000411,1.16e-12,10;UBERON:0001950,1.16e-12,10;UBERON:0010314,4.83e-11,92|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0.573066879877513,0,7.68802551266472,6.87688273053643,10.1413024560989,0,0,0,0,0,0,0,3.42175720617976,5.67024940993101,4.20649922702764,6.56997264128748,3.97563373712904,9.79926393719632,11.7889929352431,11.0306254393203,5.50579404996943,2.68143409978894,2.15049146558741,7.64940468835124,8.5083508550241,10.4182674111352,0.837548997004143,1.68828783009504,1.83357897332172,9.1334861496837,6.54909731675874,5.77838282058432,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0,0,0,2.39665023047716,1.83000241127451,42.8481340704868,7.82209440865244,7.67146371990992,2.70124457927428,4.38051410282946,0.305518091550949,0.124406970610093,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.884474488967262,0.512454881139399,0.281105173679186,0.517406741478031,0.646703978798527,0.567318240503458,0.879755620819744,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,3.36463917702604,17.1850702673405,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.339490171550376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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:223254
|HGNC=
|MCL_coexpression_id=459
|TSSclassifier=NA
|UniProt=uniprot:E9Q805
|association_with_transcript=-13bp_to_ENSMUST00000135010_5end
|cluster_id=chr14:121434378..121434408,+
|description=CAGE_peak_6_at_Farp1_5end
|id=chr14:121434378..121434408,+
|ontology_enrichment_celltype=CL:0000117!2.95e-14!23;CL:0000337!2.95e-14!23;CL:0000540!2.98e-12!33;CL:0000047!2.98e-12!33;CL:0000031!2.98e-12!33;CL:0000404!2.98e-12!33;CL:0000393!3.11e-10!39;CL:0000211!3.11e-10!39;CL:0002319!6.00e-08!43;CL:0000221!9.47e-08!44;CL:0000133!9.47e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-22,23;CL:0000337,9.16e-22,23;CL:0000540,5.20e-14,33;CL:0000047,5.20e-14,33;CL:0000031,5.20e-14,33;CL:0000404,5.20e-14,33;CL:0000393,1.00e-10,39;CL:0000211,1.00e-10,39;CL:0002319,4.47e-09,43;CL:0000221,1.03e-08,44;CL:0000133,1.03e-08,44;CL:0002609,7.21e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!8.59e-24!52;UBERON:0005068!8.59e-24!52;UBERON:0006241!8.59e-24!52;UBERON:0007135!8.59e-24!52;UBERON:0001017!1.21e-23!73;UBERON:0005743!1.21e-23!73;UBERON:0000955!9.31e-23!50;UBERON:0006238!9.31e-23!50;UBERON:0000073!1.73e-22!75;UBERON:0001016!1.73e-22!75;UBERON:0002616!5.55e-22!49;UBERON:0002020!9.07e-21!34;UBERON:0003080!1.12e-20!40;UBERON:0002780!3.30e-20!39;UBERON:0001890!3.30e-20!39;UBERON:0006240!3.30e-20!39;UBERON:0003056!3.77e-20!49;UBERON:0000033!4.01e-20!63;UBERON:0002346!4.02e-20!71;UBERON:0003075!4.02e-20!71;UBERON:0007284!4.02e-20!71;UBERON:0002791!1.47e-17!29;UBERON:0003528!1.47e-17!29;UBERON:0001893!1.47e-17!29;UBERON:0004121!2.62e-17!102;UBERON:0000924!2.62e-17!102;UBERON:0006601!2.62e-17!102;UBERON:0000956!1.35e-13!21;UBERON:0001869!1.35e-13!21;UBERON:0000203!1.35e-13!21;UBERON:0002619!2.84e-11!17;UBERON:0000153!5.03e-10!94;UBERON:0007811!5.35e-09!86;UBERON:0000025!4.66e-08!114;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0004111!7.06e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.33e-33,54;UBERON:0002020,2.38e-30,34;UBERON:0001049,1.26e-29,52;UBERON:0005068,1.26e-29,52;UBERON:0006241,1.26e-29,52;UBERON:0007135,1.26e-29,52;UBERON:0001017,3.65e-28,73;UBERON:0001016,5.52e-27,75;UBERON:0000955,2.15e-26,47;UBERON:0006238,2.15e-26,47;UBERON:0003080,3.96e-26,40;UBERON:0002780,2.41e-25,39;UBERON:0001890,2.41e-25,39;UBERON:0006240,2.41e-25,39;UBERON:0002616,3.43e-25,46;UBERON:0003528,6.39e-25,29;UBERON:0002791,6.39e-25,29;UBERON:0001893,6.39e-25,29;UBERON:0002346,1.71e-21,64;UBERON:0003075,1.71e-21,64;UBERON:0007284,1.71e-21,64;UBERON:0000956,1.27e-19,21;UBERON:0001869,1.27e-19,21;UBERON:0000203,1.27e-19,21;UBERON:0003056,3.06e-19,49;UBERON:0004121,5.33e-18,95;UBERON:0000924,5.33e-18,95;UBERON:0006601,5.33e-18,95;UBERON:0010371,3.34e-17,73;UBERON:0002619,1.15e-15,17;UBERON:0002021,1.16e-12,10;UBERON:0000411,1.16e-12,10;UBERON:0001950,1.16e-12,10;UBERON:0010314,4.83e-11,92
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0.573066879877513,0,7.68802551266472,6.87688273053643,10.1413024560989,0,0,0,0,0,0,0,3.42175720617976,5.67024940993101,4.20649922702764,6.56997264128748,3.97563373712904,9.79926393719632,11.7889929352431,11.0306254393203,5.50579404996943,2.68143409978894,2.15049146558741,7.64940468835124,8.5083508550241,10.4182674111352,0.837548997004143,1.68828783009504,1.83357897332172,9.1334861496837,6.54909731675874,5.77838282058432,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0,0,0,2.39665023047716,1.83000241127451,42.8481340704868,7.82209440865244,7.67146371990992,2.70124457927428,4.38051410282946,0.305518091550949,0.124406970610093,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.884474488967262,0.512454881139399,0.281105173679186,0.517406741478031,0.646703978798527,0.567318240503458,0.879755620819744,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,3.36463917702604,17.1850702673405,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.339490171550376,0,0.335012514883631,0.952174563544055,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,1.12385412991454,1.75817529888305,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0,1.21443210502468,0.292255857911312,0.395287777946524,11.2462460747632,0.141940085208269,0.712262414669021,0.977321756121456,0.329940245945071,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0,0,1.06949213515416,0.316036757935816,0,0,2.38307724027652,0.36012218806262,0.388076051348264,0.857348140126369,1.06404140185364,0.535106452806212,1.81003922662333,3.34911444026059,0,0.21183207086382,0,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0.474503990371703,1.01659733563424,0,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0,0.58678619322877,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0,0,0,0,0.549454872801795,0.214368379079066,0.501572104035363,12.9892923801925,11.9684561491866,9.73922372846974,10.998603669996,8.90607275701835,6.0431511791176,6.75022500231806,8.10578165803597,7.25027854374727,6.21312374102184,0,0.399024873401031,0.682934423016537,2.43106717068294,0.838452650511929,1.83843508450014,3.77819437262746,3.09052585858341,3.20919209591815,2.27427490587418,2.5347929989024,3.39527414494937,1.21733959710847,1.92075457214608,1.83793500657962,1.90517476513229,2.43357084484197,2.12200142510076,3.29668720642645,1.76638704161277,2.40008476669791,1.77475806159337,2.62279808942053,2.18019624948493,2.72917203204459,2.70766745253365,1.64635175585495,2.10455769150274,1.90125759384206,1.68342681497322,1.77952527186261,2.46261205938909,0.818462086339379,3.09873682371932,1.92906610981141,5.49583271463481,1.40358965067245,1.71896843238639,1.3390183244819,0.220591419119515,0.231867835620421
|short_description=p6@Farp1
}}

Revision as of 00:07, 4 August 2015

Short description:p6@Farp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Farp1_5end
Coexpression cluster:MCL_coexpression_mm9:459
Association with transcript: -13bp_to_ENSMUST00000135010_5end
EntrezGene:223254
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Farp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F142.85
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G117.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.33e-3354
gray matter2.38e-3034
neural tube1.26e-2952
neural rod1.26e-2952
future spinal cord1.26e-2952
neural keel1.26e-2952
central nervous system3.65e-2873
nervous system5.52e-2775
brain2.15e-2647
future brain2.15e-2647
anterior neural tube3.96e-2640
regional part of forebrain2.41e-2539
forebrain2.41e-2539
future forebrain2.41e-2539
regional part of brain3.43e-2546
brain grey matter6.39e-2529
regional part of telencephalon6.39e-2529
telencephalon6.39e-2529
neurectoderm1.71e-2164
neural plate1.71e-2164
presumptive neural plate1.71e-2164
cerebral cortex1.27e-1921
cerebral hemisphere1.27e-1921
pallium1.27e-1921
pre-chordal neural plate3.06e-1949
ectoderm-derived structure5.33e-1895
ectoderm5.33e-1895
presumptive ectoderm5.33e-1895
ecto-epithelium3.34e-1773
regional part of cerebral cortex1.15e-1517
occipital lobe1.16e-1210
visual cortex1.16e-1210
neocortex1.16e-1210
structure with developmental contribution from neural crest4.83e-1192
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