FFCP PHASE1:Mm9::chr15:100467134..100467166,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=207818|HGNC=|MCL_coexpression_id=12|UniProt=Q99KC7|association_with_transcript=119bp_to_ENSMUST00000066068,NM_174992,uc007xru.1_5end|description=CAGE_peak_4_at_Smagp_5end|id=chr15:100467134..100467166,-|ontology_enrichment_celltype=CL:0002563!4.98e-07!9;CL:0002251!4.98e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.76e-08,9;CL:0002251,1.76e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.72e-16!59;UBERON:0000160!2.10e-15!43;UBERON:0000344!3.98e-11!15;UBERON:0001242!7.66e-10!13;UBERON:0000060!7.66e-10!13;UBERON:0001262!7.66e-10!13;UBERON:0004786!7.66e-10!13;UBERON:0004119!5.84e-09!130;UBERON:0000925!5.84e-09!130;UBERON:0006595!5.84e-09!130;UBERON:0001007!2.12e-08!128;UBERON:0001555!2.12e-08!128;UBERON:0007026!2.12e-08!128;UBERON:0004921!1.31e-07!126;UBERON:0004185!1.31e-07!126;UBERON:0004923!4.13e-07!24;UBERON:0003350!4.98e-07!9;UBERON:0004808!4.98e-07!9;UBERON:0001277!4.98e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.29e-20,47;UBERON:0000160,1.53e-20,31;UBERON:0000344,1.18e-13,15;UBERON:0001242,4.95e-12,13;UBERON:0001262,4.95e-12,13;UBERON:0004786,4.95e-12,13;UBERON:0004119,3.04e-10,118;UBERON:0000925,3.04e-10,118;UBERON:0006595,3.04e-10,118;UBERON:0001007,1.48e-09,116;UBERON:0001555,1.48e-09,116;UBERON:0007026,1.48e-09,116;UBERON:0004923,4.40e-09,24;UBERON:0004921,1.41e-08,114;UBERON:0003350,1.76e-08,9;UBERON:0004808,1.76e-08,9;UBERON:0001277,1.76e-08,9|phase1_expression=0.480446541314382,38.0383194326904,42.7699285026164,58.3755927822182,46.0824071550639,25.853407874431,24.5293272625302,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0,0,1.78590909317247,0,0,35.3583254373429,32.346708630471,29.285830169866,43.0761996159075,27.7957890164797,54.9167682228921,37.8045194639896,48.780712344167,0,0.61506478758457,0,19.3530585233354,18.4520456347927,19.1919194886627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,1.61910957491345,4.54843492213368,0,2.10666630197628,0,0,0,0.845060518660083,0,0,0,1.94841936910093,1.26679932737549,3.53867111510348,9.1347103775248,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,3.70792451601561,0.289198713839823,0,0.161766849947409,0.220841518460394,0,42.8701050801681,0.292780797011547,0,38.5740153364973,0,0,0,0,0,0,0,0,0,0.162241263067758,0.712875546952214,2.36373244159177,9.35074206204597,5.05060454127538,0,0,0,1.20563854268572,0.612328492361951,0.12811372028485,0.281105173679186,2.06962696591213,0,0.189106080167819,0.175951124163949,1.31517439456545,6.95118123063995,5.92028683087683,6.58502836505419,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.671032093801859,0.210289948564127,0,54.1886804093429,22.2138475997377,0.213288250535234,0.464473343720877,4.38149368495117,5.64713868945359,5.55945109612176,9.3210556795154,27.0481565080372,12.5171205590248,11.8127548136127,15.1206918751275,14.2323783596958,21.5716658077013,24.2074615859658,30.4686148079182,0.948339504765408,0.799739588268102,2.25415471346161,0.814605311381257,0.969762435838129,2.10407459670956,1.89709611372772,1.47610147979602,3.45397201251025,3.08492909804501,0,0.166845105716094,0.589676985339609,0,0,0,0.50925170356284,0,0.810676133875177,1.09824565275233,0,1.11642284300551,0.624075346229121,4.04126204715379,3.22915344339442,1.92977408545347,0.739012760666419,0,0,0,0.234690248288502,1.00503754465089,0.714130922658041,1.56106918286239,0.945810864637146,1.7717175171902,0.797273843287435,2.13022309130459,1.38147985492716,1.15719246865209,0,0,5.90117127622843,3.31124095565679,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,1.30309567482861,2.47455184458803,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0,0,3.6179961043551,1.45413491791002,2.49548164869305,1.26414703174326,1.05418608574999,2.06271086496374,0,0,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,2.58138878870081,5.50763384245932,39.2540548537832,13.1909002353184,10.8181165886257,5.42816324353403,9.78853220825719,9.52017218521355,24.1929094402776,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,57.2802370809068,0.790839983952838,4.67634774391752,11.7725821495763,14.8452690170273,19.4342681734098,15.6442641806392,18.6796809939259,27.2226179663391,33.9591230024497,4.97071450469541,0,0.299033092087958,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0,0.5208175393758,0.629156066554265,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,13.6038230169127,3.32978930061097,0.62799699626633,3.52557694364565,9.07991091951295,3.94133198447482,6.04400360081975,11.3615240911905,37.1163356986169,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.170733605754134,2.91728060481953,2.51535795153579,2.38996560985018,0.888986911206461,1.23621034343337,1.28367683836726,2.77966932940177,1.77435509923168,0.943131706930381,1.31098110457835,1.28050304809739,1.26358031702349,0.952587382566147,1.27472758539341,2.31491064556446,1.64834360321323,1.17759136107518,2.05721551431249,2.30718548007139,1.1921809497366,2.32554266611726,1.31753132581463,1.4384483341585,1.82927972872773,2.36762740294059,1.35804113845862,2.80571135828869,1.06771516311757,1.97008964751127,3.27384834535751,1.23949472948773,3.08650577569826,3.99696924700713,2.57324769289949,4.72716318906256,1.14772999241306,1.76473135295612,0.231867835620421|short_description=p4@Smagp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:207818 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99KC7 | |||
|association_with_transcript=119bp_to_ENSMUST00000066068,NM_174992,uc007xru.1_5end | |||
|cluster_id=chr15:100467134..100467166,- | |||
|description=CAGE_peak_4_at_Smagp_5end | |||
|id=chr15:100467134..100467166,- | |||
|ontology_enrichment_celltype=CL:0002563!4.98e-07!9;CL:0002251!4.98e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.76e-08,9;CL:0002251,1.76e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.72e-16!59;UBERON:0000160!2.10e-15!43;UBERON:0000344!3.98e-11!15;UBERON:0001242!7.66e-10!13;UBERON:0000060!7.66e-10!13;UBERON:0001262!7.66e-10!13;UBERON:0004786!7.66e-10!13;UBERON:0004119!5.84e-09!130;UBERON:0000925!5.84e-09!130;UBERON:0006595!5.84e-09!130;UBERON:0001007!2.12e-08!128;UBERON:0001555!2.12e-08!128;UBERON:0007026!2.12e-08!128;UBERON:0004921!1.31e-07!126;UBERON:0004185!1.31e-07!126;UBERON:0004923!4.13e-07!24;UBERON:0003350!4.98e-07!9;UBERON:0004808!4.98e-07!9;UBERON:0001277!4.98e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.29e-20,47;UBERON:0000160,1.53e-20,31;UBERON:0000344,1.18e-13,15;UBERON:0001242,4.95e-12,13;UBERON:0001262,4.95e-12,13;UBERON:0004786,4.95e-12,13;UBERON:0004119,3.04e-10,118;UBERON:0000925,3.04e-10,118;UBERON:0006595,3.04e-10,118;UBERON:0001007,1.48e-09,116;UBERON:0001555,1.48e-09,116;UBERON:0007026,1.48e-09,116;UBERON:0004923,4.40e-09,24;UBERON:0004921,1.41e-08,114;UBERON:0003350,1.76e-08,9;UBERON:0004808,1.76e-08,9;UBERON:0001277,1.76e-08,9 | |||
|phase1_expression=0.480446541314382,38.0383194326904,42.7699285026164,58.3755927822182,46.0824071550639,25.853407874431,24.5293272625302,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0,0,1.78590909317247,0,0,35.3583254373429,32.346708630471,29.285830169866,43.0761996159075,27.7957890164797,54.9167682228921,37.8045194639896,48.780712344167,0,0.61506478758457,0,19.3530585233354,18.4520456347927,19.1919194886627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,1.61910957491345,4.54843492213368,0,2.10666630197628,0,0,0,0.845060518660083,0,0,0,1.94841936910093,1.26679932737549,3.53867111510348,9.1347103775248,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,3.70792451601561,0.289198713839823,0,0.161766849947409,0.220841518460394,0,42.8701050801681,0.292780797011547,0,38.5740153364973,0,0,0,0,0,0,0,0,0,0.162241263067758,0.712875546952214,2.36373244159177,9.35074206204597,5.05060454127538,0,0,0,1.20563854268572,0.612328492361951,0.12811372028485,0.281105173679186,2.06962696591213,0,0.189106080167819,0.175951124163949,1.31517439456545,6.95118123063995,5.92028683087683,6.58502836505419,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.671032093801859,0.210289948564127,0,54.1886804093429,22.2138475997377,0.213288250535234,0.464473343720877,4.38149368495117,5.64713868945359,5.55945109612176,9.3210556795154,27.0481565080372,12.5171205590248,11.8127548136127,15.1206918751275,14.2323783596958,21.5716658077013,24.2074615859658,30.4686148079182,0.948339504765408,0.799739588268102,2.25415471346161,0.814605311381257,0.969762435838129,2.10407459670956,1.89709611372772,1.47610147979602,3.45397201251025,3.08492909804501,0,0.166845105716094,0.589676985339609,0,0,0,0.50925170356284,0,0.810676133875177,1.09824565275233,0,1.11642284300551,0.624075346229121,4.04126204715379,3.22915344339442,1.92977408545347,0.739012760666419,0,0,0,0.234690248288502,1.00503754465089,0.714130922658041,1.56106918286239,0.945810864637146,1.7717175171902,0.797273843287435,2.13022309130459,1.38147985492716,1.15719246865209,0,0,5.90117127622843,3.31124095565679,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,1.30309567482861,2.47455184458803,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0,0,3.6179961043551,1.45413491791002,2.49548164869305,1.26414703174326,1.05418608574999,2.06271086496374,0,0,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,2.58138878870081,5.50763384245932,39.2540548537832,13.1909002353184,10.8181165886257,5.42816324353403,9.78853220825719,9.52017218521355,24.1929094402776,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,57.2802370809068,0.790839983952838,4.67634774391752,11.7725821495763,14.8452690170273,19.4342681734098,15.6442641806392,18.6796809939259,27.2226179663391,33.9591230024497,4.97071450469541,0,0.299033092087958,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0,0.5208175393758,0.629156066554265,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,13.6038230169127,3.32978930061097,0.62799699626633,3.52557694364565,9.07991091951295,3.94133198447482,6.04400360081975,11.3615240911905,37.1163356986169,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.170733605754134,2.91728060481953,2.51535795153579,2.38996560985018,0.888986911206461,1.23621034343337,1.28367683836726,2.77966932940177,1.77435509923168,0.943131706930381,1.31098110457835,1.28050304809739,1.26358031702349,0.952587382566147,1.27472758539341,2.31491064556446,1.64834360321323,1.17759136107518,2.05721551431249,2.30718548007139,1.1921809497366,2.32554266611726,1.31753132581463,1.4384483341585,1.82927972872773,2.36762740294059,1.35804113845862,2.80571135828869,1.06771516311757,1.97008964751127,3.27384834535751,1.23949472948773,3.08650577569826,3.99696924700713,2.57324769289949,4.72716318906256,1.14772999241306,1.76473135295612,0.231867835620421 | |||
|short_description=p4@Smagp | |||
}} |
Revision as of 22:50, 4 August 2015
Short description: | p4@Smagp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Smagp_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 119bp_to_ENSMUST00000066068, NM_174992, uc007xru.1_5end |
EntrezGene: | 207818 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.76e-08 | 9 |
epithelial cell of alimentary canal | 1.76e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.29e-20 | 47 |
intestine | 1.53e-20 | 31 |
mucosa | 1.18e-13 | 15 |
intestinal mucosa | 4.95e-12 | 13 |
wall of intestine | 4.95e-12 | 13 |
gastrointestinal system mucosa | 4.95e-12 | 13 |
endoderm-derived structure | 3.04e-10 | 118 |
endoderm | 3.04e-10 | 118 |
presumptive endoderm | 3.04e-10 | 118 |
digestive system | 1.48e-09 | 116 |
digestive tract | 1.48e-09 | 116 |
primitive gut | 1.48e-09 | 116 |
organ component layer | 4.40e-09 | 24 |
subdivision of digestive tract | 1.41e-08 | 114 |
epithelium of mucosa | 1.76e-08 | 9 |
gastrointestinal system epithelium | 1.76e-08 | 9 |
intestinal epithelium | 1.76e-08 | 9 |