FFCP PHASE1:Mm9::chr15:102828642..102828653,+: Difference between revisions
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{{FFCP|EntrezGene=15425|HGNC=|UniProt=G3UYM4|association_with_transcript=-34bp_to_ENSMUST00000173210_5end|description=CAGE_peak_2_at_Hoxc6_5end|id=chr15:102828642..102828653,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.18e-11!18;UBERON:0005564!2.18e-11!18;UBERON:0000489!2.30e-11!21;UBERON:0003133!3.34e-11!24;UBERON:0005156!3.62e-11!26;UBERON:0000990!3.62e-11!26;UBERON:0004176!1.55e-10!17;UBERON:0009196!1.55e-10!17;UBERON:0009117!1.55e-10!17;UBERON:0002113!7.50e-09!14;UBERON:0003918!7.50e-09!14;UBERON:0005095!7.50e-09!14;UBERON:0007687!7.50e-09!14;UBERON:0003135!2.16e-08!15;UBERON:0000473!2.33e-08!14;UBERON:0006554!5.87e-08!16;UBERON:0003101!1.64e-07!16;UBERON:0000079!1.64e-07!16;UBERON:0001008!3.74e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000991,3.75e-12,18;UBERON:0005564,3.75e-12,18;UBERON:0000489,2.89e-11,21;UBERON:0004176,4.21e-11,17;UBERON:0009196,4.21e-11,17;UBERON:0009117,4.21e-11,17;UBERON:0005156,4.13e-10,26;UBERON:0000990,4.13e-10,26;UBERON:0002113,4.91e-10,14;UBERON:0003918,4.91e-10,14;UBERON:0011143,4.91e-10,14;UBERON:0005095,4.91e-10,14;UBERON:0007687,4.91e-10,14;UBERON:0003133,7.55e-10,24;UBERON:0000473,2.02e-08,14;UBERON:0003135,1.30e-07,15;UBERON:0003101,6.50e-07,16;UBERON:0000079,6.50e-07,16;UBERON:0006554,6.63e-07,18|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,2.96659908770092,1.4209602298922,0,0,0,0,0,0.856952953211411,2.20868540951614,0,0,0,0,0,0,0,0,0,0,0,0,2.94628585473668,1.56608848879013,3.91438836233131,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.561777680527007,8.52151612890289,8.57293815189467,9.89350808628953,0,7.69958864485907,0,0,0,0,0,0.34255163915718,0.776813650941515,5.34391700633369,3.64319186208885,2.43572382649713,2.30615497256059,5.42601505989441,5.52666923537813,3.89566433121994,2.96633961281249,1.59059292611903,0,1.61766849947409,0.883366073841574,0.969750506270444,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,11.8133662066367,3.73220911830279,0.758168275301024,0,0,0,0,0,0,0,0,0,0.431135985865684,0.945530400839096,0.879755620819744,0.219195732427575,0.556094498451196,1.74126083261083,2.26360350048738,12.3401245427466,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,2.77274725695804,2.78684006232526,1.54640953586512,2.62188582010345,1.11189021922435,1.33157938278791,0.474529061544512,0.823494773620054,1.25667604400135,1.1937388322469,2.33956904542944,0,0.216138049874694,0,5.50036912763937,5.82667414309617,5.63538678365402,7.127796474586,8.14600446104028,8.76697748628982,9.23253442014156,6.34723636312289,6.59394656933774,4.44229790118482,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.827810238914197,0,0,1.14754461763673,2.27223834483936,0.315508219416257,0,0,0,0,0,0,0,0,0,9.9358059645788,5.34196811001766,7.4928001302645,11.0529982391599,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,1.58018378967908,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,5.7710188529518,6.94297034792394,3.61877549568935,2.50681922406587,2.79039529566604,0.291480836629851,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,1.31017538247707,0.944050424693745,0.247960367176008,0,2.07383957266869,0.621339313086926,0.56369293868419,10.3166416770345,7.2801735801123,10.3059129822345,7.62042958518613,6.75824501963113,9.85800804624333,7.29144555126121,4.50895181030557,3.14059357073808,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,1.31377732815827,2.56412273974171,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,2.79317411380722,1.19513524027894,1.21553358534147,1.25767897576789,1.10306105070008,1.77797382241292,2.47242068686673,0.962757628775446,2.02157769411038,1.2673964994512,2.26351609663291,1.87283014939765,1.98477972455095,1.95280594449085,0.476293691283074,2.0859178670074,2.12200142510076,2.06042950401653,1.61918812147837,3.42869252385415,1.95223386775271,1.90748951957857,2.0348498328526,2.54095327121393,2.19997980518359,2.37806364734604,1.57841826862706,1.49384525230448,1.68342681497322,2.96587545310435,1.67457620038458,2.86461730218783,1.70430525304563,0.771626443924566,0.249810577937946,2.10538447600868,2.36358159453128,3.06061331310149,1.76473135295612,1.85494268496337|short_description=p2@Hoxc6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15425 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UYM4 | |||
|association_with_transcript=-34bp_to_ENSMUST00000173210_5end | |||
|cluster_id=chr15:102828642..102828653,+ | |||
|description=CAGE_peak_2_at_Hoxc6_5end | |||
|id=chr15:102828642..102828653,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.18e-11!18;UBERON:0005564!2.18e-11!18;UBERON:0000489!2.30e-11!21;UBERON:0003133!3.34e-11!24;UBERON:0005156!3.62e-11!26;UBERON:0000990!3.62e-11!26;UBERON:0004176!1.55e-10!17;UBERON:0009196!1.55e-10!17;UBERON:0009117!1.55e-10!17;UBERON:0002113!7.50e-09!14;UBERON:0003918!7.50e-09!14;UBERON:0005095!7.50e-09!14;UBERON:0007687!7.50e-09!14;UBERON:0003135!2.16e-08!15;UBERON:0000473!2.33e-08!14;UBERON:0006554!5.87e-08!16;UBERON:0003101!1.64e-07!16;UBERON:0000079!1.64e-07!16;UBERON:0001008!3.74e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,3.75e-12,18;UBERON:0005564,3.75e-12,18;UBERON:0000489,2.89e-11,21;UBERON:0004176,4.21e-11,17;UBERON:0009196,4.21e-11,17;UBERON:0009117,4.21e-11,17;UBERON:0005156,4.13e-10,26;UBERON:0000990,4.13e-10,26;UBERON:0002113,4.91e-10,14;UBERON:0003918,4.91e-10,14;UBERON:0011143,4.91e-10,14;UBERON:0005095,4.91e-10,14;UBERON:0007687,4.91e-10,14;UBERON:0003133,7.55e-10,24;UBERON:0000473,2.02e-08,14;UBERON:0003135,1.30e-07,15;UBERON:0003101,6.50e-07,16;UBERON:0000079,6.50e-07,16;UBERON:0006554,6.63e-07,18 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,2.96659908770092,1.4209602298922,0,0,0,0,0,0.856952953211411,2.20868540951614,0,0,0,0,0,0,0,0,0,0,0,0,2.94628585473668,1.56608848879013,3.91438836233131,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.561777680527007,8.52151612890289,8.57293815189467,9.89350808628953,0,7.69958864485907,0,0,0,0,0,0.34255163915718,0.776813650941515,5.34391700633369,3.64319186208885,2.43572382649713,2.30615497256059,5.42601505989441,5.52666923537813,3.89566433121994,2.96633961281249,1.59059292611903,0,1.61766849947409,0.883366073841574,0.969750506270444,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,11.8133662066367,3.73220911830279,0.758168275301024,0,0,0,0,0,0,0,0,0,0.431135985865684,0.945530400839096,0.879755620819744,0.219195732427575,0.556094498451196,1.74126083261083,2.26360350048738,12.3401245427466,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,2.77274725695804,2.78684006232526,1.54640953586512,2.62188582010345,1.11189021922435,1.33157938278791,0.474529061544512,0.823494773620054,1.25667604400135,1.1937388322469,2.33956904542944,0,0.216138049874694,0,5.50036912763937,5.82667414309617,5.63538678365402,7.127796474586,8.14600446104028,8.76697748628982,9.23253442014156,6.34723636312289,6.59394656933774,4.44229790118482,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.827810238914197,0,0,1.14754461763673,2.27223834483936,0.315508219416257,0,0,0,0,0,0,0,0,0,9.9358059645788,5.34196811001766,7.4928001302645,11.0529982391599,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,1.58018378967908,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,5.7710188529518,6.94297034792394,3.61877549568935,2.50681922406587,2.79039529566604,0.291480836629851,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,1.31017538247707,0.944050424693745,0.247960367176008,0,2.07383957266869,0.621339313086926,0.56369293868419,10.3166416770345,7.2801735801123,10.3059129822345,7.62042958518613,6.75824501963113,9.85800804624333,7.29144555126121,4.50895181030557,3.14059357073808,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,1.31377732815827,2.56412273974171,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,2.79317411380722,1.19513524027894,1.21553358534147,1.25767897576789,1.10306105070008,1.77797382241292,2.47242068686673,0.962757628775446,2.02157769411038,1.2673964994512,2.26351609663291,1.87283014939765,1.98477972455095,1.95280594449085,0.476293691283074,2.0859178670074,2.12200142510076,2.06042950401653,1.61918812147837,3.42869252385415,1.95223386775271,1.90748951957857,2.0348498328526,2.54095327121393,2.19997980518359,2.37806364734604,1.57841826862706,1.49384525230448,1.68342681497322,2.96587545310435,1.67457620038458,2.86461730218783,1.70430525304563,0.771626443924566,0.249810577937946,2.10538447600868,2.36358159453128,3.06061331310149,1.76473135295612,1.85494268496337 | |||
|short_description=p2@Hoxc6 | |||
}} |
Revision as of 01:29, 5 August 2015
Short description: | p2@Hoxc6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hoxc6_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENSMUST00000173210_5end |
EntrezGene: | 15425 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 3.75e-12 | 18 |
gonad primordium | 3.75e-12 | 18 |
cavitated compound organ | 2.89e-11 | 21 |
external genitalia | 4.21e-11 | 17 |
indifferent external genitalia | 4.21e-11 | 17 |
indifferent gonad | 4.21e-11 | 17 |
reproductive structure | 4.13e-10 | 26 |
reproductive system | 4.13e-10 | 26 |
kidney | 4.91e-10 | 14 |
kidney mesenchyme | 4.91e-10 | 14 |
upper urinary tract | 4.91e-10 | 14 |
kidney rudiment | 4.91e-10 | 14 |
kidney field | 4.91e-10 | 14 |
reproductive organ | 7.55e-10 | 24 |
testis | 2.02e-08 | 14 |
male reproductive organ | 1.30e-07 | 15 |
male organism | 6.50e-07 | 16 |
male reproductive system | 6.50e-07 | 16 |
urinary system structure | 6.63e-07 | 18 |