FFCP PHASE1:Hg19::chr4:41362615..41362659,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |||
|TSSclassifier=strong | |||
|UniProt=D6RJ93 | |||
|association_with_transcript=0bp_to_ENST00000509638_5end | |||
|description=CAGE_peak_4_at_LIMCH1_5end | |||
|id=chr4:41362615..41362659,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.27e-11;82!UBERON:0008947;5.91e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.21e-37!115;UBERON:0001049!2.21e-30!57;UBERON:0005068!2.21e-30!57;UBERON:0006241!2.21e-30!57;UBERON:0007135!2.21e-30!57;UBERON:0005743!4.07e-30!86;UBERON:0000073!2.73e-29!94;UBERON:0001016!2.73e-29!94;UBERON:0001017!1.87e-28!82;UBERON:0000477!1.24e-25!286;UBERON:0002780!1.41e-25!41;UBERON:0001890!1.41e-25!41;UBERON:0006240!1.41e-25!41;UBERON:0003075!2.13e-25!86;UBERON:0007284!2.13e-25!86;UBERON:0004111!3.00e-25!241;UBERON:0000955!6.03e-25!69;UBERON:0006238!6.03e-25!69;UBERON:0000025!1.19e-24!194;UBERON:0002346!1.51e-24!90;UBERON:0003080!2.18e-24!42;UBERON:0002616!8.29e-24!59;UBERON:0001893!2.20e-22!34;UBERON:0002020!3.41e-22!34;UBERON:0003528!3.41e-22!34;UBERON:0002791!1.13e-21!33;UBERON:0001869!6.13e-21!32;UBERON:0003056!2.71e-18!61;UBERON:0000956!2.51e-16!25;UBERON:0000203!2.51e-16!25;UBERON:0002619!5.33e-16!22;UBERON:0000475!1.66e-15!365;UBERON:0004121!4.15e-15!169;UBERON:0000153!6.19e-15!129;UBERON:0007811!6.19e-15!129;UBERON:0000924!6.43e-15!173;UBERON:0006601!6.43e-15!173;UBERON:0000033!7.78e-15!123;UBERON:0001950!1.16e-14!20;UBERON:0000483!1.37e-14!309;UBERON:0000481!5.30e-14!347;UBERON:0000119!7.18e-14!312;UBERON:0000468!7.75e-14!659;UBERON:0000064!2.15e-13!219;UBERON:0000467!1.00e-11!625;UBERON:0000480!1.54e-11!626;UBERON:0000062!3.72e-09!511;UBERON:0000922!3.25e-08!612;UBERON:0002420!1.74e-07!9;UBERON:0007245!1.74e-07!9;UBERON:0010009!1.74e-07!9;UBERON:0010011!1.74e-07!9;UBERON:0000454!1.74e-07!9;UBERON:0002308!2.47e-07!9;UBERON:0000125!2.47e-07!9;UBERON:0003076!3.09e-07!15;UBERON:0003057!3.09e-07!15;UBERON:0002050!3.27e-07!605;UBERON:0005423!3.27e-07!605;UBERON:0000923!4.10e-07!604;UBERON:0005291!4.10e-07!604;UBERON:0006598!4.10e-07!604;UBERON:0002532!4.10e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.07e-24;34!UBERON:0003528;8.13e-24;34!UBERON:0002020;8.13e-24;34!UBERON:0001869;1.01e-23;32!UBERON:0002791;1.07e-23;32!UBERON:0002780;3.71e-23;41!UBERON:0001890;3.71e-23;41!UBERON:0000073;1.32e-20;53!UBERON:0002616;1.32e-20;53!UBERON:0000956;3.00e-20;25!UBERON:0000203;3.00e-20;25!UBERON:0002619;9.04e-20;22!UBERON:0001950;4.47e-18;20!UBERON:0000955;1.30e-14;68!UBERON:0001017;3.34e-13;75!UBERON:0001016;9.04e-13;83!UBERON:0007023;9.60e-12;114!UBERON:0002420;4.98e-09;9!UBERON:0007245;4.98e-09;9!UBERON:0010009;4.98e-09;9!UBERON:0010011;4.98e-09;9!UBERON:0000454;4.98e-09;9!UBERON:0000125;7.35e-09;9!UBERON:0002308;7.35e-09;9!UBERON:0009663;2.56e-07;7!UBERON:0001871;7.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.42e-41,114;UBERON:0001049,1.04e-37,56;UBERON:0005068,1.04e-37,56;UBERON:0006241,1.04e-37,56;UBERON:0007135,1.04e-37,56;UBERON:0000073,1.15e-35,53;UBERON:0002616,1.15e-35,53;UBERON:0001017,4.16e-33,81;UBERON:0002780,5.44e-32,41;UBERON:0001890,5.44e-32,41;UBERON:0003080,5.44e-32,41;UBERON:0006240,5.44e-32,41;UBERON:0001016,1.39e-31,89;UBERON:0000955,3.07e-30,68;UBERON:0006238,3.07e-30,68;UBERON:0003075,1.39e-29,82;UBERON:0007284,1.39e-29,82;UBERON:0001893,6.12e-28,34;UBERON:0002346,6.72e-28,86;UBERON:0003528,1.07e-27,34;UBERON:0002020,1.07e-27,34;UBERON:0001869,4.17e-26,32;UBERON:0002791,4.21e-26,32;UBERON:0000025,1.37e-24,192;UBERON:0011216,3.23e-24,223;UBERON:0003056,4.47e-23,61;UBERON:0004111,1.01e-22,240;UBERON:0000956,2.94e-20,25;UBERON:0000203,2.94e-20,25;UBERON:0010314,3.70e-20,132;UBERON:0002619,7.66e-20,22;UBERON:0010371,1.30e-19,104;UBERON:0001950,3.80e-18,20;UBERON:0004121,1.96e-14,171;UBERON:0000924,1.96e-14,171;UBERON:0006601,1.96e-14,171;UBERON:0000483,1.94e-12,306;UBERON:0000119,5.94e-12,309;UBERON:0002420,4.59e-09,9;UBERON:0007245,4.59e-09,9;UBERON:0010009,4.59e-09,9;UBERON:0010011,4.59e-09,9;UBERON:0000454,4.59e-09,9;UBERON:0000125,7.13e-09,9;UBERON:0002308,7.13e-09,9;UBERON:0009663,2.49e-07,7;UBERON:0003076,2.68e-07,15;UBERON:0003057,2.68e-07,15;UBERON:0001871,6.85e-07,6 | |||
|phase1_expression=2.18014055124668,2.99740733447376,3.94672331468719,8.00586386825043,3.12872766099101,3.48935409640147,5.06599756336621,0,0,0.491467873003018,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,1.43117993565528,1.50561867580173,3.01302335027527,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,1.44575660953827,2.50668955317945,0.869079113764942,0,0.486634870302636,0.283604451492204,0.443458794925128,0.087834785693126,2.88153966094968,0,0,0,0,0.132957960518865,0,0,0,0.596287222100115,0.860234595106124,0,1.69592382577203,0,0.550236083880135,0.208994966536811,1.8089173141853,2.13459757612026,2.34304428935269,0.805658634218294,1.52054421143703,0.488124115096339,0,0.81014194788176,0.892997282840798,0.898117490504679,0.450445921933289,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,2.27934920996244,0.132409180813219,0.573673241497627,0.354668382198357,1.12135520028461,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0.794025282120147,0.717558542755448,0.640672166455702,0.211931901159562,0,0,2.83404594050192,1.48893485065272,1.68776332241266,6.04109431999431,2.01947019395292,1.84099797284599,1.45481451136931,1.42003837006646,2.41805035746337,1.01736355386293,0,0,0,0.243947412259191,0.662648841607426,1.04574548582567,0.518305275076852,1.00928340350251,1.82488679537915,0,0,0,0,0,3.31259040111563,6.40621822296786,4.57920956778616,3.52940712743661,4.57546832594053,3.55905928666645,3.23595139584395,3.13954344200554,5.00171304030308,1.4763109092493,1.40241773803446,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.245976877086227,1.3725424823882,0,0,0,0,0.325808305310325,0,0,0.34779121492523,0.234817388471643,1.44366447761074,0.462985512576611,2.47330397904978,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0.517086863031111,3.57656445851882,0,1.59562869950922,1.04007436911366,0,0,0,1.28680194292333,0,0,0,2.13235169245527,0,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.61642896765115,1.79060963239896,0,0,0,0,0.76228387266739,9.10978977003352,3.86644406388848,11.3911060427357,7.01732626818479,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0.601892199455438,0,0,0,0.184369168541703,0.781952530212746,0,0,0,0,0,0,0,0.30239029332968,4.46594054073798,17.187741008263,3.64858122762996,2.56278298511402,9.21073048320066,4.66476371316462,2.96836132889982,0,0,0,0,0,0.362578348774867,0,0.460404944679482,1.37777337797528,0,0.655622074797121,0,0.15403067420883,0,0,0.949964660035881,0,1.19065593693561,1.51141141271498,1.54227252690289,0,0,0,0,0,0,0,2.3080511260475,4.26419039409617,3.25378394664303,6.38854272215878,1.46511143709349,1.23764249880882,0,0,1.6068392984416,0,0,0,0,0,0,0,0.979352392114111,0.165284915360978,0.192190067365106,0.127612712494584,0.4046311234222,3.71876439437829,1.5740617341532,1.3940745403212,0.616067160352178,2.12922412126809,0.869932992075073,1.48259375283136,4.00749682877575,0,0,0,0.255897791311334,0,0,0,0,0,0,1.01091240786658,3.17020642346017,0,0,1.21856744815642,3.16950440270266,0.409499734223957,0.141405431953713,0,0,3.3171948762061,4.82295973779139,0,0,2.84074527747786,3.40805847909725,6.47899885824155,0.286822704408103,0.392996164052485,2.85336841185,0,0,0.329294892959902,0,0,0,0,0,5.55448424582997,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.46508179271894,0,0,0,0.71623345421307,0,0.614321404198464,12.9239194209619,10.97221448002,3.56187856073299,0,0,6.37593562403423,0.552567831062295,0.251932747854276,0.613612095012929,0,0,4.13394415277704,5.72867758961949,0,3.35387579165574,0,6.66821940867821,3.87733098438087,8.25636073640476,41.9188975802508,0.520855522170466,2.36141999989728,0,0,5.84783395673362,0.472775363535873,0.344743373241465,1.74962768029953,4.68787486319889,10.6288966297661,5.78862905401958,12.2065389053667,11.0579259931225,9.16197618755997,10.3111136662367,4.24860007724062,0.278847488557207,0.692552326534174,6.49469718327907,0,0.0897576444097721,0,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0.421996129056054,1.63232808159148,0.141353071433941,0.216388639742091,0,0.619202951523374,1.22206028986725,0,0,0,16.7828821121886,11.236087062183,6.79366892603483,0,0.19566461893209,0.242780379534093,1.97292201424695,3.62972148145992,17.7522201745684,2.40109002588254,0,0.414752765588989,0,0,0.627865836814451,0,3.41531455235751,0,0.520679215005393,0,0,2.09672001890436,0,1.74161396320353,1.5348756588099,1.970770969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| |||
|short_description=p4@LIMCH1 | |||
}} |
Revision as of 00:51, 22 January 2014
Short description: | p4@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LIMCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509638_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | D6RJ93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data