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FFCP PHASE1:Mm9::chr17:34259256..34259320,-: Difference between revisions

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{{FFCP|EntrezGene=14312|HGNC=|UniProt=Q7JJ13|association_with_transcript=0bp_to_ENSMUST00000025193_5end|description=CAGE_peak_3_at_Brd2_5end|id=chr17:34259256..34259320,-|ontology_enrichment_celltype=CL:0000540!8.79e-14!33;CL:0000047!8.79e-14!33;CL:0000031!8.79e-14!33;CL:0000404!8.79e-14!33;CL:0000117!2.75e-13!23;CL:0000337!2.75e-13!23;CL:0000221!3.98e-11!44;CL:0000133!3.98e-11!44;CL:0002319!4.07e-11!43;CL:0000393!7.33e-09!39;CL:0000211!7.33e-09!39;CL:0000055!7.13e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,8.79e-14,33;CL:0000047,8.79e-14,33;CL:0000031,8.79e-14,33;CL:0000404,8.79e-14,33;CL:0000117,2.75e-13,23;CL:0000337,2.75e-13,23;CL:0000221,3.98e-11,44;CL:0000133,3.98e-11,44;CL:0002319,4.07e-11,43;CL:0000393,7.49e-09,39;CL:0000211,7.49e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.16e-24!73;UBERON:0005743!1.16e-24!73;UBERON:0000073!1.53e-22!75;UBERON:0001016!1.53e-22!75;UBERON:0001049!1.66e-18!52;UBERON:0005068!1.66e-18!52;UBERON:0006241!1.66e-18!52;UBERON:0007135!1.66e-18!52;UBERON:0000955!6.87e-18!50;UBERON:0006238!6.87e-18!50;UBERON:0002020!1.91e-17!34;UBERON:0002616!2.19e-17!49;UBERON:0004121!2.87e-17!102;UBERON:0000924!2.87e-17!102;UBERON:0006601!2.87e-17!102;UBERON:0002346!6.49e-16!71;UBERON:0003075!6.49e-16!71;UBERON:0007284!6.49e-16!71;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000033!2.18e-15!63;UBERON:0003080!3.11e-15!40;UBERON:0002791!4.90e-15!29;UBERON:0003528!4.90e-15!29;UBERON:0001893!4.90e-15!29;UBERON:0003056!1.41e-13!49;UBERON:0000956!7.17e-11!21;UBERON:0001869!7.17e-11!21;UBERON:0000203!7.17e-11!21;UBERON:0002619!7.52e-09!17;UBERON:0007811!3.79e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-24,73;UBERON:0001016,1.53e-22,75;UBERON:0000073,6.63e-20,54;UBERON:0001049,1.66e-18,52;UBERON:0005068,1.66e-18,52;UBERON:0006241,1.66e-18,52;UBERON:0007135,1.66e-18,52;UBERON:0004121,3.54e-18,95;UBERON:0000924,3.54e-18,95;UBERON:0006601,3.54e-18,95;UBERON:0002020,1.91e-17,34;UBERON:0002346,2.63e-17,64;UBERON:0003075,2.63e-17,64;UBERON:0007284,2.63e-17,64;UBERON:0000955,3.33e-16,47;UBERON:0006238,3.33e-16,47;UBERON:0002616,1.04e-15,46;UBERON:0002780,1.84e-15,39;UBERON:0001890,1.84e-15,39;UBERON:0006240,1.84e-15,39;UBERON:0010371,2.11e-15,73;UBERON:0003080,3.11e-15,40;UBERON:0003528,4.90e-15,29;UBERON:0002791,4.90e-15,29;UBERON:0001893,4.90e-15,29;UBERON:0003056,1.41e-13,49;UBERON:0010314,2.45e-12,92;UBERON:0000956,7.17e-11,21;UBERON:0001869,7.17e-11,21;UBERON:0000203,7.17e-11,21;UBERON:0002619,7.52e-09,17|phase1_expression=6.40595388419176,9.07336059862339,15.4699741392442,11.1911758183527,12.5223932486587,7.05092942029937,5.84031601488814,5.16493293766305,0.281577444303333,1.63845168425395,0.856089841127525,1.83475965689274,1.19840510951844,3.14713448708391,4.33042690360362,5.06188168474565,5.59649502502517,3.47008381894061,3.83920414096069,2.12194825899015,9.43980520676875,1.98581902401771,1.30599894569468,5.75972722056264,6.19405058881359,10.3361753540704,11.1998119001359,7.97243560937789,5.32065574477847,11.089325709437,3.76941868114018,6.35030673459631,7.38077745101484,0,2.02196133825892,2.1610503896604,2.45003227514843,6.27797446105362,8.5946887897618,8.89990364755457,8.82347232046521,4.09827290975067,8.25367600152961,4.02869817521847,2.43304634926835,2.38610777810186,1.56478268869608,4.57852828398938,6.81027166476863,4.6663175777828,1.95980990275508,10.062679505548,3.85899993932794,0,1.00828139742739,0.514518872071894,1.14613375975503,1.54701627683233,15.7806839470486,8.99284664762456,14.5781222806421,3.04960078862219,2.66788438833342,3.1496490104849,6.92206453796882,3.5524005747305,8.38880309451533,7.68436610643109,7.77672092313582,12.0155285115205,11.567872874326,13.7112472513826,7.28866185140325,11.6366259254206,12.8432931164437,9.19218786610021,12.1127469099328,11.8749224419225,8.44835932909339,15.9582408153535,15.9188499868193,13.5437476344758,9.77140496504833,6.75315132038016,7.63991238884051,7.07108605136802,9.39653093274079,11.3703661953433,1.8931548333296,1.20914496170857,3.76823835312181,1.72084775396277,4.75979933595425,2.15881276655127,2.59910566979068,1.34408066129201,6.74133216632409,3.06774580640504,3.37721805983729,2.12003744706204,4.78867627240714,3.84979432242953,0,0,1.29894624606728,1.77351905832569,0,8.44960709921044,2.33044095282455,4.15637989381509,1.90833859442749,3.95805121805784,3.92046345335299,3.91878865436819,4.46837087115678,5.78066320116507,3.95511948374998,3.32578520915797,5.30766331169925,6.47067399789637,5.52103796150984,3.39412677194655,5.59175283654366,8.19786231632332,15.7085030110091,4.59822699375465,2.15667224110656,2.39961092397363,2.1601938602421,4.19413790333504,8.6925114535539,11.5602003943835,9.56033761057521,10.4843337505436,6.02585329222724,9.08551073179443,2.24046600470696,3.6078021476927,4.0435641349388,6.10281382070775,3.3831315170303,2.06911893990126,3.96136685571768,3.46621081022145,5.30684693380357,4.740207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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14312
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q7JJ13
|association_with_transcript=0bp_to_ENSMUST00000025193_5end
|cluster_id=chr17:34259256..34259320,-
|description=CAGE_peak_3_at_Brd2_5end
|id=chr17:34259256..34259320,-
|ontology_enrichment_celltype=CL:0000540!8.79e-14!33;CL:0000047!8.79e-14!33;CL:0000031!8.79e-14!33;CL:0000404!8.79e-14!33;CL:0000117!2.75e-13!23;CL:0000337!2.75e-13!23;CL:0000221!3.98e-11!44;CL:0000133!3.98e-11!44;CL:0002319!4.07e-11!43;CL:0000393!7.33e-09!39;CL:0000211!7.33e-09!39;CL:0000055!7.13e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,8.79e-14,33;CL:0000047,8.79e-14,33;CL:0000031,8.79e-14,33;CL:0000404,8.79e-14,33;CL:0000117,2.75e-13,23;CL:0000337,2.75e-13,23;CL:0000221,3.98e-11,44;CL:0000133,3.98e-11,44;CL:0002319,4.07e-11,43;CL:0000393,7.49e-09,39;CL:0000211,7.49e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.16e-24!73;UBERON:0005743!1.16e-24!73;UBERON:0000073!1.53e-22!75;UBERON:0001016!1.53e-22!75;UBERON:0001049!1.66e-18!52;UBERON:0005068!1.66e-18!52;UBERON:0006241!1.66e-18!52;UBERON:0007135!1.66e-18!52;UBERON:0000955!6.87e-18!50;UBERON:0006238!6.87e-18!50;UBERON:0002020!1.91e-17!34;UBERON:0002616!2.19e-17!49;UBERON:0004121!2.87e-17!102;UBERON:0000924!2.87e-17!102;UBERON:0006601!2.87e-17!102;UBERON:0002346!6.49e-16!71;UBERON:0003075!6.49e-16!71;UBERON:0007284!6.49e-16!71;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000033!2.18e-15!63;UBERON:0003080!3.11e-15!40;UBERON:0002791!4.90e-15!29;UBERON:0003528!4.90e-15!29;UBERON:0001893!4.90e-15!29;UBERON:0003056!1.41e-13!49;UBERON:0000956!7.17e-11!21;UBERON:0001869!7.17e-11!21;UBERON:0000203!7.17e-11!21;UBERON:0002619!7.52e-09!17;UBERON:0007811!3.79e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-24,73;UBERON:0001016,1.53e-22,75;UBERON:0000073,6.63e-20,54;UBERON:0001049,1.66e-18,52;UBERON:0005068,1.66e-18,52;UBERON:0006241,1.66e-18,52;UBERON:0007135,1.66e-18,52;UBERON:0004121,3.54e-18,95;UBERON:0000924,3.54e-18,95;UBERON:0006601,3.54e-18,95;UBERON:0002020,1.91e-17,34;UBERON:0002346,2.63e-17,64;UBERON:0003075,2.63e-17,64;UBERON:0007284,2.63e-17,64;UBERON:0000955,3.33e-16,47;UBERON:0006238,3.33e-16,47;UBERON:0002616,1.04e-15,46;UBERON:0002780,1.84e-15,39;UBERON:0001890,1.84e-15,39;UBERON:0006240,1.84e-15,39;UBERON:0010371,2.11e-15,73;UBERON:0003080,3.11e-15,40;UBERON:0003528,4.90e-15,29;UBERON:0002791,4.90e-15,29;UBERON:0001893,4.90e-15,29;UBERON:0003056,1.41e-13,49;UBERON:0010314,2.45e-12,92;UBERON:0000956,7.17e-11,21;UBERON:0001869,7.17e-11,21;UBERON:0000203,7.17e-11,21;UBERON:0002619,7.52e-09,17
|phase1_expression=6.40595388419176,9.07336059862339,15.4699741392442,11.1911758183527,12.5223932486587,7.05092942029937,5.84031601488814,5.16493293766305,0.281577444303333,1.63845168425395,0.856089841127525,1.83475965689274,1.19840510951844,3.14713448708391,4.33042690360362,5.06188168474565,5.59649502502517,3.47008381894061,3.83920414096069,2.12194825899015,9.43980520676875,1.98581902401771,1.30599894569468,5.75972722056264,6.19405058881359,10.3361753540704,11.1998119001359,7.97243560937789,5.32065574477847,11.089325709437,3.76941868114018,6.35030673459631,7.38077745101484,0,2.02196133825892,2.1610503896604,2.45003227514843,6.27797446105362,8.5946887897618,8.89990364755457,8.82347232046521,4.09827290975067,8.25367600152961,4.02869817521847,2.43304634926835,2.38610777810186,1.56478268869608,4.57852828398938,6.81027166476863,4.6663175777828,1.95980990275508,10.062679505548,3.85899993932794,0,1.00828139742739,0.514518872071894,1.14613375975503,1.54701627683233,15.7806839470486,8.99284664762456,14.5781222806421,3.04960078862219,2.66788438833342,3.1496490104849,6.92206453796882,3.5524005747305,8.38880309451533,7.68436610643109,7.77672092313582,12.0155285115205,11.567872874326,13.7112472513826,7.28866185140325,11.6366259254206,12.8432931164437,9.19218786610021,12.1127469099328,11.8749224419225,8.44835932909339,15.9582408153535,15.9188499868193,13.5437476344758,9.77140496504833,6.75315132038016,7.63991238884051,7.07108605136802,9.39653093274079,11.3703661953433,1.8931548333296,1.20914496170857,3.76823835312181,1.72084775396277,4.75979933595425,2.15881276655127,2.59910566979068,1.34408066129201,6.74133216632409,3.06774580640504,3.37721805983729,2.12003744706204,4.78867627240714,3.84979432242953,0,0,1.29894624606728,1.77351905832569,0,8.44960709921044,2.33044095282455,4.15637989381509,1.90833859442749,3.95805121805784,3.92046345335299,3.91878865436819,4.46837087115678,5.78066320116507,3.95511948374998,3.32578520915797,5.30766331169925,6.47067399789637,5.52103796150984,3.39412677194655,5.59175283654366,8.19786231632332,15.7085030110091,4.59822699375465,2.15667224110656,2.39961092397363,2.1601938602421,4.19413790333504,8.6925114535539,11.5602003943835,9.56033761057521,10.4843337505436,6.02585329222724,9.08551073179443,2.24046600470696,3.6078021476927,4.0435641349388,6.10281382070775,3.3831315170303,2.06911893990126,3.96136685571768,3.46621081022145,5.30684693380357,4.74020765053944,4.77878795254617,6.72628763921441,6.89817577385095,3.40390944302075,3.87092473160687,5.47989331068937,2.22437799380478,2.78601733217733,1.64625709126355,2.9855140022774,2.1066395619397,1.02939162845886,2.84163499395593,7.45652781127807,3.75241695969754,4.68161359798639,5.20838418287463,4.13204886669548,4.16521204795921,1.86027155800326,6.17028823219124,6.65562451492866,6.08871444679878,2.29834449710733,2.83740833410495,3.80119967305864,4.61055242111206,4.16039898157152,8.62188789112922,8.23236899034275,8.92130714056255,5.02456076660734,2.98603550749328,3.71578674976702,3.35055399437443,2.21851877085677,3.11329261382818,3.42406127002606,6.16887780007865,2.14108641141214,2.5133520880027,2.58643413653496,4.28920991662064,7.19055526923377,5.18731319699266,5.57595565112228,5.87970492954553,3.54170389090159,9.01661885384643,3.25842124552503,3.49114476901726,3.0158402552837,3.09859031908861,3.98547399544926,3.1399745568275,4.07210640941942,1.48226313543574,4.50481785433454,4.32429789249047,3.14806957338795,2.63718157805054,3.37648023653384,1.78238096246994,2.30156909960649,2.59416362840057,1.64736847912849,5.75072826109418,2.97712758134803,1.24815069245824,1.76805214562978,1.61457672169721,2.41221760681684,5.72734889516475,2.65287976478679,3.58522948172457,3.05541154395339,1.64283173801951,5.52770649557992,6.42717830392237,8.78101415360095,5.99013547603526,5.3151525515706,7.17546458958692,5.24362607090362,5.87128938344045,7.37710198765709,10.5553898757491,8.70249094109935,5.90117127622843,6.07060841870411,7.22477654945064,6.91548950893999,1.80328439914343,3.7870639080656,5.36363973007636,5.0757036758563,5.81643173878557,4.30143836314594,4.90157082981267,6.22768367735431,7.2865926301481,4.67609372658099,7.51046778098395,8.9969968598106,2.6968616189571,3.38324646967785,2.93196526836437,5.77395430403874,11.9470624505967,2.6705869977048,2.11626489875326,3.20628635585027,7.08724542913855,6.14870295887855,1.55056975900933,6.18007340111759,3.56497378384721,4.74055136903724,3.16255825724996,2.06271086496374,6.46835250932197,4.32146625675145,4.01011919726539,3.42939256050548,6.0295679438373,6.42127743367454,5.59466670047211,7.30715877875038,1.87737366450968,3.81297727554876,2.8668691747145,2.80306630000516,3.06782410722221,2.95533332147964,2.86493625607528,3.11867709515616,2.91480836629851,7.04616147639937,3.75915937755276,6.81076664278634,3.33350149265481,2.82552685507037,3.8274383761887,4.57556346413045,1.86976272993241,2.23922323717853,1.65839968565309,4.77335309007557,4.58687190692646,3.86306987541013,2.16010681643603,1.46361807210128,2.40198820120795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|short_description=p3@Brd2
}}

Revision as of 16:40, 4 August 2015

Short description:p3@Brd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Brd2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000025193_5end
EntrezGene:14312
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Brd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C111.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C315.78
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.84
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I35.78
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C65.31
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E97.46
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E36.66
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.16
hippocampus, adult.CNhs10478.13-16E88.62
hippocampus, neonate N00.CNhs11228.627-43G18.23
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I95.88
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.02
kidney, neonate N10.CNhs11206.758-6D53.10
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A45.24
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F57.03
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I86.12
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron8.79e-1433
neuronal stem cell8.79e-1433
neuroblast8.79e-1433
electrically signaling cell8.79e-1433
CNS neuron (sensu Vertebrata)2.75e-1323
neuroblast (sensu Vertebrata)2.75e-1323
ectodermal cell3.98e-1144
neurectodermal cell3.98e-1144
neural cell4.07e-1143
electrically responsive cell7.49e-0939
electrically active cell7.49e-0939

Uber anatomy
Ontology termp-valuen
central nervous system1.16e-2473
nervous system1.53e-2275
regional part of nervous system6.63e-2054
neural tube1.66e-1852
neural rod1.66e-1852
future spinal cord1.66e-1852
neural keel1.66e-1852
ectoderm-derived structure3.54e-1895
ectoderm3.54e-1895
presumptive ectoderm3.54e-1895
gray matter1.91e-1734
neurectoderm2.63e-1764
neural plate2.63e-1764
presumptive neural plate2.63e-1764
brain3.33e-1647
future brain3.33e-1647
regional part of brain1.04e-1546
regional part of forebrain1.84e-1539
forebrain1.84e-1539
future forebrain1.84e-1539
ecto-epithelium2.11e-1573
anterior neural tube3.11e-1540
brain grey matter4.90e-1529
regional part of telencephalon4.90e-1529
telencephalon4.90e-1529
pre-chordal neural plate1.41e-1349
structure with developmental contribution from neural crest2.45e-1292
cerebral cortex7.17e-1121
cerebral hemisphere7.17e-1121
pallium7.17e-1121
regional part of cerebral cortex7.52e-0917
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