FFCP PHASE1:Mm9::chr18:25912617..25912677,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=108013|HGNC=|MCL_coexpression_id=13|UniProt=Q7TSY6|association_with_transcript=-133bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end|description=CAGE_peak_2_at_Celf4_5end|id=chr18:25912617..25912677,-|ontology_enrichment_celltype=CL:0000540!4.38e-17!33;CL:0000047!4.38e-17!33;CL:0000031!4.38e-17!33;CL:0000404!4.38e-17!33;CL:0000117!1.11e-13!23;CL:0000337!1.11e-13!23;CL:0000393!2.63e-13!39;CL:0000211!2.63e-13!39;CL:0002319!6.09e-11!43;CL:0000221!2.47e-10!44;CL:0000133!2.47e-10!44;CL:0000055!2.69e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.05e-20,33;CL:0000047,1.05e-20,33;CL:0000031,1.05e-20,33;CL:0000404,1.05e-20,33;CL:0000117,6.74e-17,23;CL:0000337,6.74e-17,23;CL:0000393,2.07e-16,39;CL:0000211,2.07e-16,39;CL:0002319,5.25e-13,43;CL:0000221,1.91e-12,44;CL:0000133,1.91e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.85e-29!71;UBERON:0003075!7.85e-29!71;UBERON:0007284!7.85e-29!71;UBERON:0001017!2.43e-28!73;UBERON:0005743!2.43e-28!73;UBERON:0000073!3.79e-28!75;UBERON:0001016!3.79e-28!75;UBERON:0004121!7.64e-25!102;UBERON:0000924!7.64e-25!102;UBERON:0006601!7.64e-25!102;UBERON:0001049!3.35e-23!52;UBERON:0005068!3.35e-23!52;UBERON:0006241!3.35e-23!52;UBERON:0007135!3.35e-23!52;UBERON:0000033!3.74e-22!63;UBERON:0003056!1.67e-21!49;UBERON:0000955!2.06e-21!50;UBERON:0006238!2.06e-21!50;UBERON:0002616!1.17e-20!49;UBERON:0003080!4.42e-18!40;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0002020!2.01e-17!34;UBERON:0002791!2.08e-14!29;UBERON:0003528!2.08e-14!29;UBERON:0001893!2.08e-14!29;UBERON:0007811!5.13e-10!86;UBERON:0000956!6.80e-10!21;UBERON:0001869!6.80e-10!21;UBERON:0000203!6.80e-10!21;UBERON:0000153!2.11e-08!94;UBERON:0002619!4.23e-08!17;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-35,73;UBERON:0001016,4.96e-34,75;UBERON:0002346,1.15e-33,64;UBERON:0003075,1.15e-33,64;UBERON:0007284,1.15e-33,64;UBERON:0004121,4.71e-30,95;UBERON:0000924,4.71e-30,95;UBERON:0006601,4.71e-30,95;UBERON:0000073,2.39e-29,54;UBERON:0001049,1.65e-28,52;UBERON:0005068,1.65e-28,52;UBERON:0006241,1.65e-28,52;UBERON:0007135,1.65e-28,52;UBERON:0010371,1.05e-26,73;UBERON:0003056,5.31e-25,49;UBERON:0000955,9.52e-25,47;UBERON:0006238,9.52e-25,47;UBERON:0002616,8.29e-24,46;UBERON:0010314,3.27e-23,92;UBERON:0003080,2.33e-22,40;UBERON:0002020,3.18e-22,34;UBERON:0002780,1.47e-21,39;UBERON:0001890,1.47e-21,39;UBERON:0006240,1.47e-21,39;UBERON:0003528,2.19e-18,29;UBERON:0002791,2.19e-18,29;UBERON:0001893,2.19e-18,29;UBERON:0000956,1.22e-12,21;UBERON:0001869,1.22e-12,21;UBERON:0000203,1.22e-12,21;UBERON:0002619,2.30e-10,17;UBERON:0002021,8.88e-09,10;UBERON:0000411,8.88e-09,10;UBERON:0001950,8.88e-09,10;UBERON:0002420,5.17e-07,8;UBERON:0007245,5.17e-07,8;UBERON:0010009,5.17e-07,8;UBERON:0010011,5.17e-07,8;UBERON:0000454,5.17e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,1.03134418455488,23.6710259205729,28.5655128806898,17.1134478946668,0,0,0,0,0,0,0,5.59923906465779,4.59020190327748,4.20649922702764,3.71346279724945,6.40518768759679,8.81933754347669,9.96792898589658,8.27296907949019,1.10115880999389,6.12899222808901,7.83393319606842,21.6293511877518,25.4335649214699,30.2129754922921,4.18774498502071,3.37657566019008,10.0846843532695,14.7314292736834,18.7930618654816,23.1135312823373,0.37863096666592,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,1.21439728736295,1.52232739156071,1.15307748628029,1.3565037649736,2.82212897125692,0,0,0.578397427679647,0,0,0,0,0,10.8328894894272,19.2690970268379,0,0,0,0,9.8861822007183,5.94750783664214,9.92669381691629,11.4724051326902,11.2514801225345,10.5971902725376,11.0324058886075,1.62942982160506,0,0,2.73574412652416,0.520481771850815,0.919608417733892,3.78130472591233,9.34369870581433,9.25296388458059,8.83984669965463,7.40243624021858,6.72628763921441,0,0,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.23674473558521,1.18058539048442,0.925602677324269,1.39520366850245,0,0.350296027101508,0,0.164167464079095,0.243206428637567,0,0,0.134206418760372,11.9865270681553,9.98174740079059,0,0,0.213288250535234,0.928946687441754,1.03093969057675,2.01683524623343,0.889512175379481,0.951128130562796,0,0.658795818896044,0.502670417600539,0,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.571242563048644,1.1270773567308,0.814605311381257,0.581857461502877,0.561086559122548,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0.289298117163023,0,0,0,0,6.90367536947505,8.67366480782304,0,0,5.04813151066011,5.85658116444958,10.7711698866399,1.67278158566786,2.00518806674155,4.52922449262132,5.26253912177363,8.47541987942804,12.2539211163422,17.0300297703558,0,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0.614870295887855,0.516856586336442,1.45413491791002,0.712994756769443,0,0,0,9.53230896110606,1.26042765821917,1.81102157295856,2.14337035031592,4.07882537377229,3.0322698992352,4.27827453565514,0.304464949114599,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,0,0.609958401380546,0.972048067396211,1.04544148007234,0.87345025498471,0.404593039154462,0.165306911450672,0,0.259229946583586,0,1.69107881605257,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0,0.13020438484395,0.104859344425711,4.1069300540421,3.74439008135225,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,23.7195773899168,12.4287813856938,13.1765968091061,11.6860163993708,8.22099023724771,6.0431511791176,8.10027000278167,7.20513925158753,8.60970577069989,7.7664046762773,1.45302286617847,8.37952234142165,3.92687293234509,3.8897074730927,2.51535795153579,3.30918315210025,4.00044110042907,4.53277125925567,4.1719497246936,5.30664144703975,3.04175159868288,3.39527414494937,3.183811253976,5.12201219238954,5.28406314391642,4.28664322154766,4.28772005995965,3.27945674788299,3.70877310722976,2.79677948255355,4.80016953339582,4.43689515398344,3.33810665926249,4.50573891560218,3.67026583619789,3.89227196301712,3.47563148458268,5.78753365163254,5.97538100921792,2.80571135828869,2.60997039873183,2.46261205938909,3.6830793885272,3.87342102964915,1.35034627686799,4.99621155875892,2.33931608445408,1.07435527024149,0.765153328275374,0,0.463735671240843|short_description=p2@Celf4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108013 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TSY6 | |||
|association_with_transcript=-133bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end | |||
|cluster_id=chr18:25912617..25912677,- | |||
|description=CAGE_peak_2_at_Celf4_5end | |||
|id=chr18:25912617..25912677,- | |||
|ontology_enrichment_celltype=CL:0000540!4.38e-17!33;CL:0000047!4.38e-17!33;CL:0000031!4.38e-17!33;CL:0000404!4.38e-17!33;CL:0000117!1.11e-13!23;CL:0000337!1.11e-13!23;CL:0000393!2.63e-13!39;CL:0000211!2.63e-13!39;CL:0002319!6.09e-11!43;CL:0000221!2.47e-10!44;CL:0000133!2.47e-10!44;CL:0000055!2.69e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.05e-20,33;CL:0000047,1.05e-20,33;CL:0000031,1.05e-20,33;CL:0000404,1.05e-20,33;CL:0000117,6.74e-17,23;CL:0000337,6.74e-17,23;CL:0000393,2.07e-16,39;CL:0000211,2.07e-16,39;CL:0002319,5.25e-13,43;CL:0000221,1.91e-12,44;CL:0000133,1.91e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.85e-29!71;UBERON:0003075!7.85e-29!71;UBERON:0007284!7.85e-29!71;UBERON:0001017!2.43e-28!73;UBERON:0005743!2.43e-28!73;UBERON:0000073!3.79e-28!75;UBERON:0001016!3.79e-28!75;UBERON:0004121!7.64e-25!102;UBERON:0000924!7.64e-25!102;UBERON:0006601!7.64e-25!102;UBERON:0001049!3.35e-23!52;UBERON:0005068!3.35e-23!52;UBERON:0006241!3.35e-23!52;UBERON:0007135!3.35e-23!52;UBERON:0000033!3.74e-22!63;UBERON:0003056!1.67e-21!49;UBERON:0000955!2.06e-21!50;UBERON:0006238!2.06e-21!50;UBERON:0002616!1.17e-20!49;UBERON:0003080!4.42e-18!40;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0002020!2.01e-17!34;UBERON:0002791!2.08e-14!29;UBERON:0003528!2.08e-14!29;UBERON:0001893!2.08e-14!29;UBERON:0007811!5.13e-10!86;UBERON:0000956!6.80e-10!21;UBERON:0001869!6.80e-10!21;UBERON:0000203!6.80e-10!21;UBERON:0000153!2.11e-08!94;UBERON:0002619!4.23e-08!17;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-35,73;UBERON:0001016,4.96e-34,75;UBERON:0002346,1.15e-33,64;UBERON:0003075,1.15e-33,64;UBERON:0007284,1.15e-33,64;UBERON:0004121,4.71e-30,95;UBERON:0000924,4.71e-30,95;UBERON:0006601,4.71e-30,95;UBERON:0000073,2.39e-29,54;UBERON:0001049,1.65e-28,52;UBERON:0005068,1.65e-28,52;UBERON:0006241,1.65e-28,52;UBERON:0007135,1.65e-28,52;UBERON:0010371,1.05e-26,73;UBERON:0003056,5.31e-25,49;UBERON:0000955,9.52e-25,47;UBERON:0006238,9.52e-25,47;UBERON:0002616,8.29e-24,46;UBERON:0010314,3.27e-23,92;UBERON:0003080,2.33e-22,40;UBERON:0002020,3.18e-22,34;UBERON:0002780,1.47e-21,39;UBERON:0001890,1.47e-21,39;UBERON:0006240,1.47e-21,39;UBERON:0003528,2.19e-18,29;UBERON:0002791,2.19e-18,29;UBERON:0001893,2.19e-18,29;UBERON:0000956,1.22e-12,21;UBERON:0001869,1.22e-12,21;UBERON:0000203,1.22e-12,21;UBERON:0002619,2.30e-10,17;UBERON:0002021,8.88e-09,10;UBERON:0000411,8.88e-09,10;UBERON:0001950,8.88e-09,10;UBERON:0002420,5.17e-07,8;UBERON:0007245,5.17e-07,8;UBERON:0010009,5.17e-07,8;UBERON:0010011,5.17e-07,8;UBERON:0000454,5.17e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,1.03134418455488,23.6710259205729,28.5655128806898,17.1134478946668,0,0,0,0,0,0,0,5.59923906465779,4.59020190327748,4.20649922702764,3.71346279724945,6.40518768759679,8.81933754347669,9.96792898589658,8.27296907949019,1.10115880999389,6.12899222808901,7.83393319606842,21.6293511877518,25.4335649214699,30.2129754922921,4.18774498502071,3.37657566019008,10.0846843532695,14.7314292736834,18.7930618654816,23.1135312823373,0.37863096666592,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,1.21439728736295,1.52232739156071,1.15307748628029,1.3565037649736,2.82212897125692,0,0,0.578397427679647,0,0,0,0,0,10.8328894894272,19.2690970268379,0,0,0,0,9.8861822007183,5.94750783664214,9.92669381691629,11.4724051326902,11.2514801225345,10.5971902725376,11.0324058886075,1.62942982160506,0,0,2.73574412652416,0.520481771850815,0.919608417733892,3.78130472591233,9.34369870581433,9.25296388458059,8.83984669965463,7.40243624021858,6.72628763921441,0,0,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.23674473558521,1.18058539048442,0.925602677324269,1.39520366850245,0,0.350296027101508,0,0.164167464079095,0.243206428637567,0,0,0.134206418760372,11.9865270681553,9.98174740079059,0,0,0.213288250535234,0.928946687441754,1.03093969057675,2.01683524623343,0.889512175379481,0.951128130562796,0,0.658795818896044,0.502670417600539,0,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.571242563048644,1.1270773567308,0.814605311381257,0.581857461502877,0.561086559122548,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0.289298117163023,0,0,0,0,6.90367536947505,8.67366480782304,0,0,5.04813151066011,5.85658116444958,10.7711698866399,1.67278158566786,2.00518806674155,4.52922449262132,5.26253912177363,8.47541987942804,12.2539211163422,17.0300297703558,0,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0.614870295887855,0.516856586336442,1.45413491791002,0.712994756769443,0,0,0,9.53230896110606,1.26042765821917,1.81102157295856,2.14337035031592,4.07882537377229,3.0322698992352,4.27827453565514,0.304464949114599,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,0,0.609958401380546,0.972048067396211,1.04544148007234,0.87345025498471,0.404593039154462,0.165306911450672,0,0.259229946583586,0,1.69107881605257,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0,0.13020438484395,0.104859344425711,4.1069300540421,3.74439008135225,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,23.7195773899168,12.4287813856938,13.1765968091061,11.6860163993708,8.22099023724771,6.0431511791176,8.10027000278167,7.20513925158753,8.60970577069989,7.7664046762773,1.45302286617847,8.37952234142165,3.92687293234509,3.8897074730927,2.51535795153579,3.30918315210025,4.00044110042907,4.53277125925567,4.1719497246936,5.30664144703975,3.04175159868288,3.39527414494937,3.183811253976,5.12201219238954,5.28406314391642,4.28664322154766,4.28772005995965,3.27945674788299,3.70877310722976,2.79677948255355,4.80016953339582,4.43689515398344,3.33810665926249,4.50573891560218,3.67026583619789,3.89227196301712,3.47563148458268,5.78753365163254,5.97538100921792,2.80571135828869,2.60997039873183,2.46261205938909,3.6830793885272,3.87342102964915,1.35034627686799,4.99621155875892,2.33931608445408,1.07435527024149,0.765153328275374,0,0.463735671240843 | |||
|short_description=p2@Celf4 | |||
}} |
Revision as of 14:56, 5 August 2015
Short description: | p2@Celf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Celf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -133bp_to_ENSMUST00000025117, ENSMUST00000078609, ENSMUST00000115816, NM_001146292, NM_001146293, NM_001146294, NM_001146295, NM_001174074, NM_133195, uc008ehk.2, uc008ehl.2, uc012ban.1, uc012bao.1, uc012bap.1, uc012baq.1_5end |
EntrezGene: | 108013 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.05e-20 | 33 |
neuronal stem cell | 1.05e-20 | 33 |
neuroblast | 1.05e-20 | 33 |
electrically signaling cell | 1.05e-20 | 33 |
CNS neuron (sensu Vertebrata) | 6.74e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.74e-17 | 23 |
electrically responsive cell | 2.07e-16 | 39 |
electrically active cell | 2.07e-16 | 39 |
neural cell | 5.25e-13 | 43 |
ectodermal cell | 1.91e-12 | 44 |
neurectodermal cell | 1.91e-12 | 44 |