FFCP PHASE1:Mm9::chr1:173319277..173319288,+: Difference between revisions
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{{FFCP|EntrezGene=226652|HGNC=|MCL_coexpression_id=3|UniProt=Q640N3,E9QMX7|association_with_transcript=186bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end|description=CAGE_peak_6_at_Arhgap30_5end|id=chr1:173319277..173319288,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,2.91e-11,32;CL:0002032,2.91e-11,32;CL:0000037,2.91e-11,32;CL:0000837,2.91e-11,32;CL:0002320,4.62e-11,46;CL:0000134,4.62e-11,46;CL:0000049,1.80e-10,19;CL:0000219,7.55e-09,54;CL:0002092,2.32e-08,3;CL:0002540,2.32e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.92e-09,3;DOID:4045,5.92e-09,3|ontology_enrichment_uberon=UBERON:0002405!4.38e-07!70;UBERON:0002204!7.68e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.13e-16,32;UBERON:0001474,1.13e-15,22;UBERON:0004765,1.13e-15,22;UBERON:0001434,1.13e-15,22;UBERON:0002106,1.31e-13,6;UBERON:0004457,1.31e-13,6;UBERON:0000042,1.31e-13,6;UBERON:0004854,1.31e-13,6;UBERON:0009034,1.31e-13,6;UBERON:0002095,1.31e-13,6;UBERON:0004782,1.31e-13,6;UBERON:0003281,1.31e-13,6;UBERON:0009664,1.31e-13,6;UBERON:0002296,1.31e-13,6;UBERON:0005602,1.31e-13,6;UBERON:0001179,1.31e-13,6;UBERON:0006293,1.31e-13,6;UBERON:0002371,2.12e-13,16;UBERON:0002390,2.26e-11,45;UBERON:0003061,2.26e-11,45;UBERON:0002384,4.62e-11,46;UBERON:0003887,1.22e-10,10;UBERON:0002193,2.04e-10,48;UBERON:0002405,2.04e-10,48;UBERON:0003081,3.89e-07,87|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0,0,0.0797721589953364,0,0.0874204024189974,1.66554880907831,0.202475267389826,0,1.10411757875383,1.50825876966313,0,0.255129870453209,3.47518329203099,2.87319768052829,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,27.204555997899,14.8453715459522,20.9409497589519,19.4116391050235,12.294818729252,19.4204141212461,0,0,0,0,0,0,0,0,0,1.8456086666351,0,1.00828139742739,0,0.286533439938757,0.515672092277442,0,0,0,0,0,3.1496490104849,3.9554654502679,4.2628806896766,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0.191690942036473,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0,0,0.860423876981386,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.742210695324124,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.289198713839823,1.76922110389975,0.970601099684455,1.76673214768315,1.45462575940567,0,0,0,0,1.91704199209472,1.19980546198682,1.65191295194984,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.407357455401265,1.8661045591514,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,3.51106593656617,1.54408744268829,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0,0.31399745568275,0,0.296452627087149,0.500535317148282,0,0.674586337154561,0.405720242777006,0.964708639009667,0.50925170356284,0.863088412352432,1.45921704097532,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0,0.923765950833023,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.780534591431195,0.315270288212382,0.221464689648775,0.637819074629948,0.81931657357869,1.03610989119537,1.01254341007058,10.5553898757491,9.24639662491806,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.565815239267694,0,0,0.258428293168221,0,1.06949213515416,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0,0.32977250588296,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0,2.9048049735635,2.06386867963222,2.40752885580625,2.82552685507037,1.23024804948923,1.14389086603261,1.18984900995699,0.839708713941948,0.414599921413271,0,0.158167996790568,0.406638934253697,0.108005340821801,0.836353184057875,0.218362563746178,0,0.330613822901344,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0.600977247599844,0.590758108698309,0.201932899896295,0.0762068066549998,0.302478555410522,0.682205165178267,0.384847366561318,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.565879024158229,0.655490552289177,0.320125762024346,0.229741875822453,0.952587382566147,0.463537303779422,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.953744759789284,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421|short_description=p6@Arhgap30}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226652 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q640N3,uniprot:E9QMX7 | |||
|association_with_transcript=186bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end | |||
|cluster_id=chr1:173319277..173319288,+ | |||
|description=CAGE_peak_6_at_Arhgap30_5end | |||
|id=chr1:173319277..173319288,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.91e-11,32;CL:0002032,2.91e-11,32;CL:0000037,2.91e-11,32;CL:0000837,2.91e-11,32;CL:0002320,4.62e-11,46;CL:0000134,4.62e-11,46;CL:0000049,1.80e-10,19;CL:0000219,7.55e-09,54;CL:0002092,2.32e-08,3;CL:0002540,2.32e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.92e-09,3;DOID:4045,5.92e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!4.38e-07!70;UBERON:0002204!7.68e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.13e-16,32;UBERON:0001474,1.13e-15,22;UBERON:0004765,1.13e-15,22;UBERON:0001434,1.13e-15,22;UBERON:0002106,1.31e-13,6;UBERON:0004457,1.31e-13,6;UBERON:0000042,1.31e-13,6;UBERON:0004854,1.31e-13,6;UBERON:0009034,1.31e-13,6;UBERON:0002095,1.31e-13,6;UBERON:0004782,1.31e-13,6;UBERON:0003281,1.31e-13,6;UBERON:0009664,1.31e-13,6;UBERON:0002296,1.31e-13,6;UBERON:0005602,1.31e-13,6;UBERON:0001179,1.31e-13,6;UBERON:0006293,1.31e-13,6;UBERON:0002371,2.12e-13,16;UBERON:0002390,2.26e-11,45;UBERON:0003061,2.26e-11,45;UBERON:0002384,4.62e-11,46;UBERON:0003887,1.22e-10,10;UBERON:0002193,2.04e-10,48;UBERON:0002405,2.04e-10,48;UBERON:0003081,3.89e-07,87 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0,0,0.0797721589953364,0,0.0874204024189974,1.66554880907831,0.202475267389826,0,1.10411757875383,1.50825876966313,0,0.255129870453209,3.47518329203099,2.87319768052829,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,27.204555997899,14.8453715459522,20.9409497589519,19.4116391050235,12.294818729252,19.4204141212461,0,0,0,0,0,0,0,0,0,1.8456086666351,0,1.00828139742739,0,0.286533439938757,0.515672092277442,0,0,0,0,0,3.1496490104849,3.9554654502679,4.2628806896766,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0.191690942036473,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0,0,0.860423876981386,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.742210695324124,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.289198713839823,1.76922110389975,0.970601099684455,1.76673214768315,1.45462575940567,0,0,0,0,1.91704199209472,1.19980546198682,1.65191295194984,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.407357455401265,1.8661045591514,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,3.51106593656617,1.54408744268829,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0,0.31399745568275,0,0.296452627087149,0.500535317148282,0,0.674586337154561,0.405720242777006,0.964708639009667,0.50925170356284,0.863088412352432,1.45921704097532,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0,0.923765950833023,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.780534591431195,0.315270288212382,0.221464689648775,0.637819074629948,0.81931657357869,1.03610989119537,1.01254341007058,10.5553898757491,9.24639662491806,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.565815239267694,0,0,0.258428293168221,0,1.06949213515416,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0,0.32977250588296,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0,2.9048049735635,2.06386867963222,2.40752885580625,2.82552685507037,1.23024804948923,1.14389086603261,1.18984900995699,0.839708713941948,0.414599921413271,0,0.158167996790568,0.406638934253697,0.108005340821801,0.836353184057875,0.218362563746178,0,0.330613822901344,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0.600977247599844,0.590758108698309,0.201932899896295,0.0762068066549998,0.302478555410522,0.682205165178267,0.384847366561318,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.565879024158229,0.655490552289177,0.320125762024346,0.229741875822453,0.952587382566147,0.463537303779422,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.953744759789284,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p6@Arhgap30 | |||
}} |
Revision as of 06:13, 5 August 2015
Short description: | p6@Arhgap30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arhgap30_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 186bp_to_ENSMUST00000111282, NM_001005508, uc007doh.2, uc007doi.2_5end |
EntrezGene: | 226652 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.91e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.91e-11 | 32 |
hematopoietic stem cell | 2.91e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.91e-11 | 32 |
connective tissue cell | 4.62e-11 | 46 |
mesenchymal cell | 4.62e-11 | 46 |
common myeloid progenitor | 1.80e-10 | 19 |
motile cell | 7.55e-09 | 54 |
bone marrow cell | 2.32e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.32e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.13e-16 | 32 |
bone element | 1.13e-15 | 22 |
skeletal element | 1.13e-15 | 22 |
skeletal system | 1.13e-15 | 22 |
spleen | 1.31e-13 | 6 |
cavity lining | 1.31e-13 | 6 |
serous membrane | 1.31e-13 | 6 |
gastrointestinal system mesentery | 1.31e-13 | 6 |
stomach region | 1.31e-13 | 6 |
mesentery | 1.31e-13 | 6 |
gastrointestinal system serosa | 1.31e-13 | 6 |
mesentery of stomach | 1.31e-13 | 6 |
gut mesentery | 1.31e-13 | 6 |
dorsal mesentery | 1.31e-13 | 6 |
dorsal mesogastrium | 1.31e-13 | 6 |
peritoneal cavity | 1.31e-13 | 6 |
spleen primordium | 1.31e-13 | 6 |
bone marrow | 2.12e-13 | 16 |
hematopoietic system | 2.26e-11 | 45 |
blood island | 2.26e-11 | 45 |
connective tissue | 4.62e-11 | 46 |
intraembryonic coelom | 1.22e-10 | 10 |
hemolymphoid system | 2.04e-10 | 48 |
immune system | 2.04e-10 | 48 |
lateral plate mesoderm | 3.89e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.92e-09 | 3 |
muscle cancer | 5.92e-09 | 3 |