FFCP PHASE1:Mm9::chr1:193801249..193801270,+: Difference between revisions
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{{FFCP|EntrezGene=74023|HGNC=|MCL_coexpression_id=982|UniProt=Q8BRE0,Q05D96|association_with_transcript=0bp_to_ENSMUST00000053463,NM_001177900,NM_023727,uc007edd.2,uc007ede.2_5end|description=CAGE_peak_2_at_Rd3_5end|id=chr1:193801249..193801270,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!3.27e-12!9;UBERON:0000019!3.27e-12!9;UBERON:0000047!3.27e-12!9;UBERON:0004088!3.27e-12!9;UBERON:0002104!3.27e-12!9;UBERON:0001456!3.27e-12!9;UBERON:0003072!3.27e-12!9;UBERON:0003071!3.27e-12!9;UBERON:0004128!3.27e-12!9;UBERON:0001444!1.11e-09!11;UBERON:0000020!9.79e-09!12;UBERON:0001032!9.79e-09!12;UBERON:0004456!9.79e-09!12;UBERON:0005085!6.16e-08!13;UBERON:0002048!7.13e-07!14;UBERON:0000117!7.13e-07!14;UBERON:0000171!7.13e-07!14;UBERON:0000170!7.13e-07!14;UBERON:0005597!7.13e-07!14;UBERON:0000118!7.13e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.61e-16,9;UBERON:0000019,6.61e-16,9;UBERON:0000047,6.61e-16,9;UBERON:0010312,6.61e-16,9;UBERON:0004088,6.61e-16,9;UBERON:0002104,6.61e-16,9;UBERON:0001456,6.61e-16,9;UBERON:0003072,6.61e-16,9;UBERON:0004128,6.61e-16,9;UBERON:0003071,6.61e-16,9;UBERON:0001444,4.36e-13,11;UBERON:0000020,5.00e-12,12;UBERON:0001032,5.00e-12,12;UBERON:0004456,5.00e-12,12;UBERON:0000033,3.95e-11,13;UBERON:0005085,3.95e-11,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,6.14749288514487,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0.248813941220186,0,12.6265113531884,0.260240885925407,0.229902104433473,0,0.30140963567143,0.204109497453984,1.5373646434182,1.03071897015702,18.6266426932091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0.491589944147214,0.518054945597687,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9489621984198,0,0,0,0,0,0,0,0.104859344425711,3.38217769156408,9.79302021276743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p2@Rd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74023 | |||
|HGNC= | |||
|MCL_coexpression_id=982 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BRE0,uniprot:Q05D96 | |||
|association_with_transcript=0bp_to_ENSMUST00000053463,NM_001177900,NM_023727,uc007edd.2,uc007ede.2_5end | |||
|cluster_id=chr1:193801249..193801270,+ | |||
|description=CAGE_peak_2_at_Rd3_5end | |||
|id=chr1:193801249..193801270,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.27e-12!9;UBERON:0000019!3.27e-12!9;UBERON:0000047!3.27e-12!9;UBERON:0004088!3.27e-12!9;UBERON:0002104!3.27e-12!9;UBERON:0001456!3.27e-12!9;UBERON:0003072!3.27e-12!9;UBERON:0003071!3.27e-12!9;UBERON:0004128!3.27e-12!9;UBERON:0001444!1.11e-09!11;UBERON:0000020!9.79e-09!12;UBERON:0001032!9.79e-09!12;UBERON:0004456!9.79e-09!12;UBERON:0005085!6.16e-08!13;UBERON:0002048!7.13e-07!14;UBERON:0000117!7.13e-07!14;UBERON:0000171!7.13e-07!14;UBERON:0000170!7.13e-07!14;UBERON:0005597!7.13e-07!14;UBERON:0000118!7.13e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.61e-16,9;UBERON:0000019,6.61e-16,9;UBERON:0000047,6.61e-16,9;UBERON:0010312,6.61e-16,9;UBERON:0004088,6.61e-16,9;UBERON:0002104,6.61e-16,9;UBERON:0001456,6.61e-16,9;UBERON:0003072,6.61e-16,9;UBERON:0004128,6.61e-16,9;UBERON:0003071,6.61e-16,9;UBERON:0001444,4.36e-13,11;UBERON:0000020,5.00e-12,12;UBERON:0001032,5.00e-12,12;UBERON:0004456,5.00e-12,12;UBERON:0000033,3.95e-11,13;UBERON:0005085,3.95e-11,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,6.14749288514487,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0.248813941220186,0,12.6265113531884,0.260240885925407,0.229902104433473,0,0.30140963567143,0.204109497453984,1.5373646434182,1.03071897015702,18.6266426932091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0.491589944147214,0.518054945597687,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9489621984198,0,0,0,0,0,0,0,0.104859344425711,3.38217769156408,9.79302021276743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p2@Rd3 | |||
}} |
Revision as of 12:30, 5 August 2015
Short description: | p2@Rd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:982 |
Association with transcript: | 0bp_to_ENSMUST00000053463, NM_001177900, NM_023727, uc007edd.2, uc007ede.2_5end |
EntrezGene: | 74023 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 6.61e-16 | 9 |
camera-type eye | 6.61e-16 | 9 |
simple eye | 6.61e-16 | 9 |
immature eye | 6.61e-16 | 9 |
ocular region | 6.61e-16 | 9 |
visual system | 6.61e-16 | 9 |
face | 6.61e-16 | 9 |
optic cup | 6.61e-16 | 9 |
optic vesicle | 6.61e-16 | 9 |
eye primordium | 6.61e-16 | 9 |
subdivision of head | 4.36e-13 | 11 |
sense organ | 5.00e-12 | 12 |
sensory system | 5.00e-12 | 12 |
entire sense organ system | 5.00e-12 | 12 |
head | 3.95e-11 | 13 |
ectodermal placode | 3.95e-11 | 13 |