FFCP PHASE1:Mm9::chr2:118488971..118489045,+: Difference between revisions
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{{FFCP|EntrezGene=214230|HGNC=|MCL_coexpression_id=2|UniProt=Q3ULB5|association_with_transcript=0bp_to_ENSMUST00000099557_5end|description=CAGE_peak_1_at_Pak6_5end|id=chr2:118488971..118489045,+|ontology_enrichment_celltype=CL:0000117!3.84e-13!23;CL:0000337!3.84e-13!23;CL:0000540!3.89e-09!33;CL:0000047!3.89e-09!33;CL:0000031!3.89e-09!33;CL:0000404!3.89e-09!33;CL:0002319!4.65e-09!43;CL:0000221!8.87e-09!44;CL:0000133!8.87e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-15,23;CL:0000337,2.37e-15,23;CL:0002319,3.58e-09,43;CL:0000540,1.00e-08,33;CL:0000047,1.00e-08,33;CL:0000031,1.00e-08,33;CL:0000404,1.00e-08,33;CL:0000221,1.10e-08,44;CL:0000133,1.10e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.28e-25!73;UBERON:0005743!9.28e-25!73;UBERON:0001049!1.76e-23!52;UBERON:0005068!1.76e-23!52;UBERON:0006241!1.76e-23!52;UBERON:0007135!1.76e-23!52;UBERON:0000073!2.57e-23!75;UBERON:0001016!2.57e-23!75;UBERON:0000955!4.64e-22!50;UBERON:0006238!4.64e-22!50;UBERON:0003080!1.21e-21!40;UBERON:0002616!2.20e-21!49;UBERON:0002020!2.24e-21!34;UBERON:0002780!4.36e-21!39;UBERON:0001890!4.36e-21!39;UBERON:0006240!4.36e-21!39;UBERON:0002346!5.85e-19!71;UBERON:0003075!5.85e-19!71;UBERON:0007284!5.85e-19!71;UBERON:0002791!1.87e-18!29;UBERON:0003528!1.87e-18!29;UBERON:0001893!1.87e-18!29;UBERON:0004121!7.06e-18!102;UBERON:0000924!7.06e-18!102;UBERON:0006601!7.06e-18!102;UBERON:0003056!2.76e-16!49;UBERON:0000033!3.08e-15!63;UBERON:0000956!7.83e-14!21;UBERON:0001869!7.83e-14!21;UBERON:0000203!7.83e-14!21;UBERON:0002619!8.99e-12!17;UBERON:0000025!1.20e-09!114;UBERON:0004111!1.77e-08!122;UBERON:0002021!2.93e-08!10;UBERON:0000411!2.93e-08!10;UBERON:0001950!2.93e-08!10;UBERON:0007811!1.04e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.92e-28,54;UBERON:0001049,8.55e-27,52;UBERON:0005068,8.55e-27,52;UBERON:0006241,8.55e-27,52;UBERON:0007135,8.55e-27,52;UBERON:0001017,4.61e-26,73;UBERON:0002020,3.62e-25,34;UBERON:0003080,7.91e-25,40;UBERON:0001016,1.34e-24,75;UBERON:0010314,2.08e-24,92;UBERON:0002780,3.65e-24,39;UBERON:0001890,3.65e-24,39;UBERON:0006240,3.65e-24,39;UBERON:0000955,1.54e-23,47;UBERON:0006238,1.54e-23,47;UBERON:0002616,9.47e-23,46;UBERON:0003528,1.10e-21,29;UBERON:0002791,1.10e-21,29;UBERON:0001893,1.10e-21,29;UBERON:0002346,9.55e-21,64;UBERON:0003075,9.55e-21,64;UBERON:0007284,9.55e-21,64;UBERON:0003056,1.50e-19,49;UBERON:0004121,2.64e-16,95;UBERON:0000924,2.64e-16,95;UBERON:0006601,2.64e-16,95;UBERON:0000956,3.56e-16,21;UBERON:0001869,3.56e-16,21;UBERON:0000203,3.56e-16,21;UBERON:0010371,6.78e-16,73;UBERON:0002619,1.01e-13,17;UBERON:0000025,1.52e-09,114;UBERON:0002021,1.54e-09,10;UBERON:0000411,1.54e-09,10;UBERON:0001950,1.54e-09,10;UBERON:0004111,4.58e-08,122|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0.342401459862411,0,1.66554880907831,0.607425802169478,3.49780939064073,0.157731082679119,0.274228867211478,0,3.74190476664707,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,5.08024538767705,4.30545351309199,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,3.05235218932625,6.15121311656521,5.63846707315422,2.2397827460058,2.87505128729943,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,20.636279007679,29.6234948392338,20.9164363157039,0,0,0,0,0,4.49400165777607,7.68436610643109,7.46565208621039,10.6654691282036,7.78202357000113,12.8542942981712,17.6694832761291,16.4137670948038,13.8975932976443,18.3843757322004,4.40463523997555,7.40586560894089,8.90917892886212,26.1134849705784,26.5314166446988,28.129322010065,7.2587579740359,7.31591393041184,12.5294563176984,17.3830865429464,19.6472919502762,16.7759501242771,0.075726193333184,0.0755715601067855,5.2175607966302,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0.422530259330042,0,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.45673551887624,0.258937883647172,4.89859058913922,2.08182392119363,2.74018930480927,3.45923245884088,3.16517545160507,2.70454026412121,2.76466500925286,0.988779870937496,0.289198713839823,0,0,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0.510914110417183,0.359445373517761,0,0.508280908292259,12.4326230706003,24.7050325522058,66.3454979155924,35.4601613192244,35.5444485689159,12.6750707181332,21.7403292510795,0.509196819251581,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,1.20563854268572,1.29269348387523,1.2811372028485,1.3118241438362,0.258703370739016,0,0,0.703804496655795,0.219195732427575,0.278047249225598,1.74126083261083,1.85203922767149,0.398068533636986,0,0,0,2.89976081549703,3.28336483973535,4.32148947506436,5.68187365404505,5.3126342571799,6.01641740260775,5.58081467400979,8.85302224618743,7.00592054203017,4.44311594766397,5.74586124276833,2.43206428637567,4.5321996101853,3.95190207523891,2.54992195644706,33.8566817188245,36.3253281698874,0,0,0,0.232236671860439,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.49409686417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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:214230 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3ULB5 | |||
|association_with_transcript=0bp_to_ENSMUST00000099557_5end | |||
|cluster_id=chr2:118488971..118489045,+ | |||
|description=CAGE_peak_1_at_Pak6_5end | |||
|id=chr2:118488971..118489045,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.84e-13!23;CL:0000337!3.84e-13!23;CL:0000540!3.89e-09!33;CL:0000047!3.89e-09!33;CL:0000031!3.89e-09!33;CL:0000404!3.89e-09!33;CL:0002319!4.65e-09!43;CL:0000221!8.87e-09!44;CL:0000133!8.87e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-15,23;CL:0000337,2.37e-15,23;CL:0002319,3.58e-09,43;CL:0000540,1.00e-08,33;CL:0000047,1.00e-08,33;CL:0000031,1.00e-08,33;CL:0000404,1.00e-08,33;CL:0000221,1.10e-08,44;CL:0000133,1.10e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.28e-25!73;UBERON:0005743!9.28e-25!73;UBERON:0001049!1.76e-23!52;UBERON:0005068!1.76e-23!52;UBERON:0006241!1.76e-23!52;UBERON:0007135!1.76e-23!52;UBERON:0000073!2.57e-23!75;UBERON:0001016!2.57e-23!75;UBERON:0000955!4.64e-22!50;UBERON:0006238!4.64e-22!50;UBERON:0003080!1.21e-21!40;UBERON:0002616!2.20e-21!49;UBERON:0002020!2.24e-21!34;UBERON:0002780!4.36e-21!39;UBERON:0001890!4.36e-21!39;UBERON:0006240!4.36e-21!39;UBERON:0002346!5.85e-19!71;UBERON:0003075!5.85e-19!71;UBERON:0007284!5.85e-19!71;UBERON:0002791!1.87e-18!29;UBERON:0003528!1.87e-18!29;UBERON:0001893!1.87e-18!29;UBERON:0004121!7.06e-18!102;UBERON:0000924!7.06e-18!102;UBERON:0006601!7.06e-18!102;UBERON:0003056!2.76e-16!49;UBERON:0000033!3.08e-15!63;UBERON:0000956!7.83e-14!21;UBERON:0001869!7.83e-14!21;UBERON:0000203!7.83e-14!21;UBERON:0002619!8.99e-12!17;UBERON:0000025!1.20e-09!114;UBERON:0004111!1.77e-08!122;UBERON:0002021!2.93e-08!10;UBERON:0000411!2.93e-08!10;UBERON:0001950!2.93e-08!10;UBERON:0007811!1.04e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.92e-28,54;UBERON:0001049,8.55e-27,52;UBERON:0005068,8.55e-27,52;UBERON:0006241,8.55e-27,52;UBERON:0007135,8.55e-27,52;UBERON:0001017,4.61e-26,73;UBERON:0002020,3.62e-25,34;UBERON:0003080,7.91e-25,40;UBERON:0001016,1.34e-24,75;UBERON:0010314,2.08e-24,92;UBERON:0002780,3.65e-24,39;UBERON:0001890,3.65e-24,39;UBERON:0006240,3.65e-24,39;UBERON:0000955,1.54e-23,47;UBERON:0006238,1.54e-23,47;UBERON:0002616,9.47e-23,46;UBERON:0003528,1.10e-21,29;UBERON:0002791,1.10e-21,29;UBERON:0001893,1.10e-21,29;UBERON:0002346,9.55e-21,64;UBERON:0003075,9.55e-21,64;UBERON:0007284,9.55e-21,64;UBERON:0003056,1.50e-19,49;UBERON:0004121,2.64e-16,95;UBERON:0000924,2.64e-16,95;UBERON:0006601,2.64e-16,95;UBERON:0000956,3.56e-16,21;UBERON:0001869,3.56e-16,21;UBERON:0000203,3.56e-16,21;UBERON:0010371,6.78e-16,73;UBERON:0002619,1.01e-13,17;UBERON:0000025,1.52e-09,114;UBERON:0002021,1.54e-09,10;UBERON:0000411,1.54e-09,10;UBERON:0001950,1.54e-09,10;UBERON:0004111,4.58e-08,122 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0.342401459862411,0,1.66554880907831,0.607425802169478,3.49780939064073,0.157731082679119,0.274228867211478,0,3.74190476664707,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,5.08024538767705,4.30545351309199,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,3.05235218932625,6.15121311656521,5.63846707315422,2.2397827460058,2.87505128729943,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,20.636279007679,29.6234948392338,20.9164363157039,0,0,0,0,0,4.49400165777607,7.68436610643109,7.46565208621039,10.6654691282036,7.78202357000113,12.8542942981712,17.6694832761291,16.4137670948038,13.8975932976443,18.3843757322004,4.40463523997555,7.40586560894089,8.90917892886212,26.1134849705784,26.5314166446988,28.129322010065,7.2587579740359,7.31591393041184,12.5294563176984,17.3830865429464,19.6472919502762,16.7759501242771,0.075726193333184,0.0755715601067855,5.2175607966302,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0.422530259330042,0,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.45673551887624,0.258937883647172,4.89859058913922,2.08182392119363,2.74018930480927,3.45923245884088,3.16517545160507,2.70454026412121,2.76466500925286,0.988779870937496,0.289198713839823,0,0,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0.510914110417183,0.359445373517761,0,0.508280908292259,12.4326230706003,24.7050325522058,66.3454979155924,35.4601613192244,35.5444485689159,12.6750707181332,21.7403292510795,0.509196819251581,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,1.20563854268572,1.29269348387523,1.2811372028485,1.3118241438362,0.258703370739016,0,0,0.703804496655795,0.219195732427575,0.278047249225598,1.74126083261083,1.85203922767149,0.398068533636986,0,0,0,2.89976081549703,3.28336483973535,4.32148947506436,5.68187365404505,5.3126342571799,6.01641740260775,5.58081467400979,8.85302224618743,7.00592054203017,4.44311594766397,5.74586124276833,2.43206428637567,4.5321996101853,3.95190207523891,2.54992195644706,33.8566817188245,36.3253281698874,0,0,0,0.232236671860439,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.597423819763102,0.189667900953082,0.228497025219458,0,0.610953983535943,0.581857461502877,0.49095073923223,0.379419222745544,2.80459281161244,1.56998727841375,2.09775178667061,0,1.16791574001266,0.982794975566015,1.57403478669398,0.202860121388503,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0,0,0.554259570499814,0.37898282354097,0.651859905768103,0.848725428875941,0.704070744865506,0.670025029767263,0.238043640886014,0.585400943573396,0.315270288212382,0,0.318909537314974,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,1.9266070798535,3.5163505977661,0,0,0.94652465824877,0,1.50796378412959,0.955875191810208,0.222798674082394,0.849229592366497,0.809621403349789,2.04579100537918,0,32.7747742750243,4.5420827266646,1.24645922567079,0.81443479676788,0.494910368917606,3.98235415019888,1.21390318077491,1.209294227859,0.943025398779491,1.47650946440386,0.922305443831782,1.55056975900933,1.45413491791002,0.712994756769443,1.26414703174326,4.21674434299995,0,6.12791290356818,1.62054984628179,0.776152102696527,3.85806663056866,6.38424841112185,5.88617098086833,4.27827453565514,7.30715877875038,0,0.42366414172764,0.220528398054962,0.8244312647074,1.45317984026315,0.663442174209714,0.596861720015682,0.820704498725306,0,5.37733375830478,0.854354403989263,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.457556346413045,1.01987057996313,0.419854356970974,1.24379976423981,2.86401185404534,0.316335993581135,1.01659733563424,0.540026704109006,0.418176592028937,0.655087691238533,0.404593039154462,1.07449492442937,0.26175594198403,0.259229946583586,0,1.12738587736838,0.897099276263873,0.496375471371293,2.52786544847262,1.16243841129958,1.18269287843545,2.58185925020659,2.21347454234715,4.08951443260272,1.93267296660805,4.03242008761012,0.632022241256357,0.202725215290164,0,0,0.537080087002444,0,0.360586348559907,0.147689527174577,0.605798699688886,0.304827226619999,1.20991422164209,1.8516997340553,1.05833025804362,1.63627663054197,0,0,0,0,1.35232715822533,0,0,0.428736758158132,1.00314420807073,107.302850097243,106.795454869665,114.00620717444,69.2568324845061,53.4364365421101,44.5682399459923,48.60162001669,49.9856535578885,45.7673833074047,58.5069152279557,0,0.798049746802062,3.07320490357441,2.43106717068294,6.07878171621149,6.25067928730048,4.22268782823069,5.76898160268904,4.49286893428541,3.03236654116557,5.57654459758527,4.33840585187975,4.49479235855436,4.48176066834085,4.82457939227151,5.71552429539688,6.60540657885676,3.8581844092741,5.76920261124629,3.53277408322554,3.08582327146874,3.37204031702741,3.33810665926249,4.50573891560218,5.45834406408918,4.3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| |||
|short_description=p1@Pak6 | |||
}} |
Revision as of 20:00, 3 August 2015
Short description: | p1@Pak6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pak6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000099557_5end |
EntrezGene: | 214230 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.37e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.37e-15 | 23 |
neural cell | 3.58e-09 | 43 |
neuron | 1.00e-08 | 33 |
neuronal stem cell | 1.00e-08 | 33 |
neuroblast | 1.00e-08 | 33 |
electrically signaling cell | 1.00e-08 | 33 |
ectodermal cell | 1.10e-08 | 44 |
neurectodermal cell | 1.10e-08 | 44 |