FFCP PHASE1:Mm9::chr2:180011557..180011577,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:180011557..180011577,-|id=chr2:180011557..180011577,-|ontology_enrichment_celltype=CL:0000063!9.49e-10!66;CL:0000791!3.14e-08!9;CL:0000789!3.14e-08!9;CL:0002420!3.14e-08!9;CL:0002419!3.14e-08!9;CL:0000790!3.14e-08!9;CL:0000838!5.11e-08!12;CL:0002563!1.24e-07!9;CL:0002251!1.24e-07!9;CL:0000542!2.61e-07!13;CL:0000051!2.61e-07!13;CL:0002076!2.67e-07!15;CL:0002250!3.71e-07!3;CL:0000988!6.62e-07!32;CL:0002032!6.62e-07!32;CL:0000037!6.62e-07!32;CL:0000566!6.62e-07!32;CL:0000837!6.62e-07!32;CL:0000144!6.89e-07!121;CL:0000012!6.89e-07!121|ontology_enrichment_celltype_v019_2=CL:0000838,3.07e-15,12;CL:0000791,1.48e-14,9;CL:0000789,1.48e-14,9;CL:0002420,1.48e-14,9;CL:0002419,1.48e-14,9;CL:0000790,1.48e-14,9;CL:0000542,4.86e-14,13;CL:0000051,4.86e-14,13;CL:0000084,6.79e-12,11;CL:0000827,6.79e-12,11;CL:0000624,8.73e-11,8;CL:0000738,1.20e-10,17;CL:0002087,1.20e-10,17;CL:0000988,2.03e-09,32;CL:0002032,2.03e-09,32;CL:0000037,2.03e-09,32;CL:0000837,2.03e-09,32;CL:0000034,1.50e-08,97;CL:0000723,7.39e-08,91;CL:0000048,7.39e-08,91;CL:0002250,1.29e-07,3;CL:0002031,4.18e-07,25|ontology_enrichment_disease=DOID:0060100!6.76e-08!3;DOID:4045!6.76e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.53e-17,3;DOID:4045,3.53e-17,3;DOID:0050686,7.51e-09,6|ontology_enrichment_uberon=UBERON:0000344!3.34e-09!15;UBERON:0001242!8.97e-09!13;UBERON:0000060!8.97e-09!13;UBERON:0001262!8.97e-09!13;UBERON:0004786!8.97e-09!13;UBERON:0003350!1.24e-07!9;UBERON:0004808!1.24e-07!9;UBERON:0001277!1.24e-07!9|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,4.77756296733832,0,0,0,0.0797721589953364,7.70403284690426,5.07038334030185,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.380046838912748,0,0.443461021310609,0,0,0,1.73310971850765,0.664938581433969,3.26670970019791,8.78916424547506,8.5946887897618,12.0410461113974,16.4704816648684,10.2456822743767,6.311634589405,0,0,0,0,0,0,0,0,0,1.34226084846189,7.25362142011344,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.79970819298022,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,1.01987057996313,0.979660166265606,0.552799895217695,0,0,0,0,0.418176592028937,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:180011557..180011577,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:180011557..180011577,- | |||
|description=CAGE_peak_at_chr2:180011557..180011577,- | |||
|id=chr2:180011557..180011577,- | |||
|ontology_enrichment_celltype=CL:0000063!9.49e-10!66;CL:0000791!3.14e-08!9;CL:0000789!3.14e-08!9;CL:0002420!3.14e-08!9;CL:0002419!3.14e-08!9;CL:0000790!3.14e-08!9;CL:0000838!5.11e-08!12;CL:0002563!1.24e-07!9;CL:0002251!1.24e-07!9;CL:0000542!2.61e-07!13;CL:0000051!2.61e-07!13;CL:0002076!2.67e-07!15;CL:0002250!3.71e-07!3;CL:0000988!6.62e-07!32;CL:0002032!6.62e-07!32;CL:0000037!6.62e-07!32;CL:0000566!6.62e-07!32;CL:0000837!6.62e-07!32;CL:0000144!6.89e-07!121;CL:0000012!6.89e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.07e-15,12;CL:0000791,1.48e-14,9;CL:0000789,1.48e-14,9;CL:0002420,1.48e-14,9;CL:0002419,1.48e-14,9;CL:0000790,1.48e-14,9;CL:0000542,4.86e-14,13;CL:0000051,4.86e-14,13;CL:0000084,6.79e-12,11;CL:0000827,6.79e-12,11;CL:0000624,8.73e-11,8;CL:0000738,1.20e-10,17;CL:0002087,1.20e-10,17;CL:0000988,2.03e-09,32;CL:0002032,2.03e-09,32;CL:0000037,2.03e-09,32;CL:0000837,2.03e-09,32;CL:0000034,1.50e-08,97;CL:0000723,7.39e-08,91;CL:0000048,7.39e-08,91;CL:0002250,1.29e-07,3;CL:0002031,4.18e-07,25 | |||
|ontology_enrichment_disease=DOID:0060100!6.76e-08!3;DOID:4045!6.76e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.53e-17,3;DOID:4045,3.53e-17,3;DOID:0050686,7.51e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.34e-09!15;UBERON:0001242!8.97e-09!13;UBERON:0000060!8.97e-09!13;UBERON:0001262!8.97e-09!13;UBERON:0004786!8.97e-09!13;UBERON:0003350!1.24e-07!9;UBERON:0004808!1.24e-07!9;UBERON:0001277!1.24e-07!9 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,4.77756296733832,0,0,0,0.0797721589953364,7.70403284690426,5.07038334030185,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.380046838912748,0,0.443461021310609,0,0,0,1.73310971850765,0.664938581433969,3.26670970019791,8.78916424547506,8.5946887897618,12.0410461113974,16.4704816648684,10.2456822743767,6.311634589405,0,0,0,0,0,0,0,0,0,1.34226084846189,7.25362142011344,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.79970819298022,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,1.01987057996313,0.979660166265606,0.552799895217695,0,0,0,0,0.418176592028937,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:180011557..180011577,- | |||
}} |
Latest revision as of 17:20, 4 August 2015
Short description: | p@chr2:180011557..180011577, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:180011557..180011577, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.07e-15 | 12 |
mature alpha-beta T cell | 1.48e-14 | 9 |
alpha-beta T cell | 1.48e-14 | 9 |
immature T cell | 1.48e-14 | 9 |
mature T cell | 1.48e-14 | 9 |
immature alpha-beta T cell | 1.48e-14 | 9 |
lymphocyte | 4.86e-14 | 13 |
common lymphoid progenitor | 4.86e-14 | 13 |
T cell | 6.79e-12 | 11 |
pro-T cell | 6.79e-12 | 11 |
CD4-positive, alpha-beta T cell | 8.73e-11 | 8 |
leukocyte | 1.20e-10 | 17 |
nongranular leukocyte | 1.20e-10 | 17 |
hematopoietic cell | 2.03e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.03e-09 | 32 |
hematopoietic stem cell | 2.03e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.03e-09 | 32 |
stem cell | 1.50e-08 | 97 |
somatic stem cell | 7.39e-08 | 91 |
multi fate stem cell | 7.39e-08 | 91 |
intestinal crypt stem cell | 1.29e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 4.18e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.53e-17 | 3 |
muscle cancer | 3.53e-17 | 3 |
organ system cancer | 7.51e-09 | 6 |