FFCP PHASE1:Mm9::chr2:180773991..180774025,-: Difference between revisions
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{{FFCP|EntrezGene=11438|HGNC=|MCL_coexpression_id=13|UniProt=O70174|association_with_transcript=0bp_to_ENSMUST00000067120_5end|description=CAGE_peak_2_at_Chrna4_5end|id=chr2:180773991..180774025,-|ontology_enrichment_celltype=CL:0000221!2.87e-14!44;CL:0000133!2.87e-14!44;CL:0002319!4.11e-14!43;CL:0000540!2.77e-13!33;CL:0000047!2.77e-13!33;CL:0000031!2.77e-13!33;CL:0000404!2.77e-13!33;CL:0000117!7.47e-11!23;CL:0000337!7.47e-11!23;CL:0000055!1.22e-09!50;CL:0000393!5.79e-09!39;CL:0000211!5.79e-09!39|ontology_enrichment_celltype_v019_2=CL:0000540,7.09e-16,33;CL:0000047,7.09e-16,33;CL:0000031,7.09e-16,33;CL:0000404,7.09e-16,33;CL:0002319,6.32e-15,43;CL:0000221,2.34e-14,44;CL:0000133,2.34e-14,44;CL:0000117,4.55e-14,23;CL:0000337,4.55e-14,23;CL:0000393,4.31e-12,39;CL:0000211,4.31e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.67e-29!73;UBERON:0005743!1.67e-29!73;UBERON:0004121!9.35e-29!102;UBERON:0000924!9.35e-29!102;UBERON:0006601!9.35e-29!102;UBERON:0000073!2.88e-28!75;UBERON:0001016!2.88e-28!75;UBERON:0002346!3.48e-25!71;UBERON:0003075!3.48e-25!71;UBERON:0007284!3.48e-25!71;UBERON:0000033!3.57e-20!63;UBERON:0001049!1.87e-19!52;UBERON:0005068!1.87e-19!52;UBERON:0006241!1.87e-19!52;UBERON:0007135!1.87e-19!52;UBERON:0000955!1.72e-17!50;UBERON:0006238!1.72e-17!50;UBERON:0003056!2.06e-17!49;UBERON:0002616!3.72e-17!49;UBERON:0002020!9.52e-15!34;UBERON:0003080!4.65e-14!40;UBERON:0002780!2.05e-13!39;UBERON:0001890!2.05e-13!39;UBERON:0006240!2.05e-13!39;UBERON:0002791!3.14e-11!29;UBERON:0003528!3.14e-11!29;UBERON:0001893!3.14e-11!29;UBERON:0007811!3.12e-09!86;UBERON:0000153!4.46e-08!94;UBERON:0002021!2.27e-07!10;UBERON:0000411!2.27e-07!10;UBERON:0001950!2.27e-07!10;UBERON:0002619!4.04e-07!17;UBERON:0000956!6.96e-07!21;UBERON:0001869!6.96e-07!21;UBERON:0000203!6.96e-07!21;UBERON:0000468!9.00e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.08e-31,73;UBERON:0001016,6.59e-30,75;UBERON:0004121,7.54e-28,95;UBERON:0000924,7.54e-28,95;UBERON:0006601,7.54e-28,95;UBERON:0002346,7.92e-26,64;UBERON:0003075,7.92e-26,64;UBERON:0007284,7.92e-26,64;UBERON:0000073,8.14e-22,54;UBERON:0010371,1.14e-20,73;UBERON:0001049,6.40e-20,52;UBERON:0005068,6.40e-20,52;UBERON:0006241,6.40e-20,52;UBERON:0007135,6.40e-20,52;UBERON:0002020,7.10e-19,34;UBERON:0003056,3.99e-17,49;UBERON:0000955,1.01e-14,47;UBERON:0006238,1.01e-14,47;UBERON:0002616,2.91e-14,46;UBERON:0010314,4.45e-14,92;UBERON:0003528,9.90e-14,29;UBERON:0002791,9.90e-14,29;UBERON:0001893,9.90e-14,29;UBERON:0003080,1.03e-13,40;UBERON:0002780,7.32e-13,39;UBERON:0001890,7.32e-13,39;UBERON:0006240,7.32e-13,39;UBERON:0002021,1.82e-10,10;UBERON:0000411,1.82e-10,10;UBERON:0001950,1.82e-10,10;UBERON:0002619,1.50e-08,17;UBERON:0002420,2.11e-08,8;UBERON:0007245,2.11e-08,8;UBERON:0010009,2.11e-08,8;UBERON:0010011,2.11e-08,8;UBERON:0000454,2.11e-08,8;UBERON:0002240,4.67e-08,6;UBERON:0005174,4.67e-08,6;UBERON:0001137,4.67e-08,6;UBERON:0000956,1.71e-07,21;UBERON:0001869,1.71e-07,21;UBERON:0000203,1.71e-07,21;UBERON:0003076,4.10e-07,12;UBERON:0003057,4.10e-07,12;UBERON:0001948,4.52e-07,5;UBERON:0002315,4.52e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.96222640742402,0.439372365468944,0.194429899074283,0.839918529752175,4.31257693094915,0,0,0,0,0,0,8.29497489524351,7.40587370980846,12.6766280701236,0,0,0,0,0,2.09720077362883,4.2264013585371,0.311068836925433,0.810035629990144,0,9.42648248532552,8.1721360152097,0.734944795289724,1.53352753629178,0,3.30347642998166,9.44886301830389,8.60196586234964,15.0350368012421,14.1805847583735,8.85552729946492,5.58365998002762,3.37657566019008,3.51435969886663,11.490514833473,9.8236459751381,8.20157561631323,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,1.63286352971307,0.520455980298408,0.913396434936424,0.461230994512117,0.753613202763113,0.587943535678524,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0,0,0,0.878342391034642,0,0,0,0,0,6.5907881338122,1.37250180845588,1.63350657746724,6.95297280769106,5.62574006126727,6.02585329222724,5.67844420737152,0.81471491080253,0,0,0.420883711772948,3.25301107406759,2.5289231487682,4.32149111532838,1.05493372485001,2.17716797284249,2.0498195245576,1.59292931751539,0.776110112217047,0.431135985865684,0,0.351902248327898,0.876782929710299,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0.16455984991348,0,0.162137619091711,0,0,0,4.20579897128254,1.9551876352064,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,1.32767530667157,0.685491075658373,0,0.610953983535943,0.581857461502877,1.05203729835478,1.45444035385792,1.47610147979602,1.41298855057237,1.35736880313981,0,0.333690211432188,0.786235980452812,0,0.405720242777006,0,0,0,0.162135226775035,0,0,0,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11438 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O70174 | |||
|association_with_transcript=0bp_to_ENSMUST00000067120_5end | |||
|cluster_id=chr2:180773991..180774025,- | |||
|description=CAGE_peak_2_at_Chrna4_5end | |||
|id=chr2:180773991..180774025,- | |||
|ontology_enrichment_celltype=CL:0000221!2.87e-14!44;CL:0000133!2.87e-14!44;CL:0002319!4.11e-14!43;CL:0000540!2.77e-13!33;CL:0000047!2.77e-13!33;CL:0000031!2.77e-13!33;CL:0000404!2.77e-13!33;CL:0000117!7.47e-11!23;CL:0000337!7.47e-11!23;CL:0000055!1.22e-09!50;CL:0000393!5.79e-09!39;CL:0000211!5.79e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.09e-16,33;CL:0000047,7.09e-16,33;CL:0000031,7.09e-16,33;CL:0000404,7.09e-16,33;CL:0002319,6.32e-15,43;CL:0000221,2.34e-14,44;CL:0000133,2.34e-14,44;CL:0000117,4.55e-14,23;CL:0000337,4.55e-14,23;CL:0000393,4.31e-12,39;CL:0000211,4.31e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.67e-29!73;UBERON:0005743!1.67e-29!73;UBERON:0004121!9.35e-29!102;UBERON:0000924!9.35e-29!102;UBERON:0006601!9.35e-29!102;UBERON:0000073!2.88e-28!75;UBERON:0001016!2.88e-28!75;UBERON:0002346!3.48e-25!71;UBERON:0003075!3.48e-25!71;UBERON:0007284!3.48e-25!71;UBERON:0000033!3.57e-20!63;UBERON:0001049!1.87e-19!52;UBERON:0005068!1.87e-19!52;UBERON:0006241!1.87e-19!52;UBERON:0007135!1.87e-19!52;UBERON:0000955!1.72e-17!50;UBERON:0006238!1.72e-17!50;UBERON:0003056!2.06e-17!49;UBERON:0002616!3.72e-17!49;UBERON:0002020!9.52e-15!34;UBERON:0003080!4.65e-14!40;UBERON:0002780!2.05e-13!39;UBERON:0001890!2.05e-13!39;UBERON:0006240!2.05e-13!39;UBERON:0002791!3.14e-11!29;UBERON:0003528!3.14e-11!29;UBERON:0001893!3.14e-11!29;UBERON:0007811!3.12e-09!86;UBERON:0000153!4.46e-08!94;UBERON:0002021!2.27e-07!10;UBERON:0000411!2.27e-07!10;UBERON:0001950!2.27e-07!10;UBERON:0002619!4.04e-07!17;UBERON:0000956!6.96e-07!21;UBERON:0001869!6.96e-07!21;UBERON:0000203!6.96e-07!21;UBERON:0000468!9.00e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.08e-31,73;UBERON:0001016,6.59e-30,75;UBERON:0004121,7.54e-28,95;UBERON:0000924,7.54e-28,95;UBERON:0006601,7.54e-28,95;UBERON:0002346,7.92e-26,64;UBERON:0003075,7.92e-26,64;UBERON:0007284,7.92e-26,64;UBERON:0000073,8.14e-22,54;UBERON:0010371,1.14e-20,73;UBERON:0001049,6.40e-20,52;UBERON:0005068,6.40e-20,52;UBERON:0006241,6.40e-20,52;UBERON:0007135,6.40e-20,52;UBERON:0002020,7.10e-19,34;UBERON:0003056,3.99e-17,49;UBERON:0000955,1.01e-14,47;UBERON:0006238,1.01e-14,47;UBERON:0002616,2.91e-14,46;UBERON:0010314,4.45e-14,92;UBERON:0003528,9.90e-14,29;UBERON:0002791,9.90e-14,29;UBERON:0001893,9.90e-14,29;UBERON:0003080,1.03e-13,40;UBERON:0002780,7.32e-13,39;UBERON:0001890,7.32e-13,39;UBERON:0006240,7.32e-13,39;UBERON:0002021,1.82e-10,10;UBERON:0000411,1.82e-10,10;UBERON:0001950,1.82e-10,10;UBERON:0002619,1.50e-08,17;UBERON:0002420,2.11e-08,8;UBERON:0007245,2.11e-08,8;UBERON:0010009,2.11e-08,8;UBERON:0010011,2.11e-08,8;UBERON:0000454,2.11e-08,8;UBERON:0002240,4.67e-08,6;UBERON:0005174,4.67e-08,6;UBERON:0001137,4.67e-08,6;UBERON:0000956,1.71e-07,21;UBERON:0001869,1.71e-07,21;UBERON:0000203,1.71e-07,21;UBERON:0003076,4.10e-07,12;UBERON:0003057,4.10e-07,12;UBERON:0001948,4.52e-07,5;UBERON:0002315,4.52e-07,5 | |||
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|short_description=p2@Chrna4 | |||
}} |
Revision as of 17:54, 4 August 2015
Short description: | p2@Chrna4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chrna4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000067120_5end |
EntrezGene: | 11438 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.09e-16 | 33 |
neuronal stem cell | 7.09e-16 | 33 |
neuroblast | 7.09e-16 | 33 |
electrically signaling cell | 7.09e-16 | 33 |
neural cell | 6.32e-15 | 43 |
ectodermal cell | 2.34e-14 | 44 |
neurectodermal cell | 2.34e-14 | 44 |
CNS neuron (sensu Vertebrata) | 4.55e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.55e-14 | 23 |
electrically responsive cell | 4.31e-12 | 39 |
electrically active cell | 4.31e-12 | 39 |