FFCP PHASE1:Mm9::chr2:28048430..28048441,+: Difference between revisions
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{{FFCP|EntrezGene=56177|HGNC=|MCL_coexpression_id=13|UniProt=A3KGE4|association_with_transcript=-70bp_to_ENSMUST00000113920,ENSMUST00000152415_5end|description=CAGE_peak_10_at_Olfm1_5end|id=chr2:28048430..28048441,+|ontology_enrichment_celltype=CL:0002319!3.40e-15!43;CL:0000221!3.64e-15!44;CL:0000133!3.64e-15!44;CL:0000540!4.23e-14!33;CL:0000047!4.23e-14!33;CL:0000031!4.23e-14!33;CL:0000404!4.23e-14!33;CL:0000117!4.68e-14!23;CL:0000337!4.68e-14!23;CL:0000055!4.90e-12!50;CL:0000393!2.75e-11!39;CL:0000211!2.75e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.61e-23,23;CL:0000337,9.61e-23,23;CL:0000540,7.28e-19,33;CL:0000047,7.28e-19,33;CL:0000031,7.28e-19,33;CL:0000404,7.28e-19,33;CL:0002319,2.38e-18,43;CL:0000221,1.07e-17,44;CL:0000133,1.07e-17,44;CL:0000393,1.34e-14,39;CL:0000211,1.34e-14,39;CL:0002321,1.30e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.24e-35!73;UBERON:0005743!1.24e-35!73;UBERON:0000073!2.40e-35!75;UBERON:0001016!2.40e-35!75;UBERON:0004121!5.14e-32!102;UBERON:0000924!5.14e-32!102;UBERON:0006601!5.14e-32!102;UBERON:0002346!1.25e-31!71;UBERON:0003075!1.25e-31!71;UBERON:0007284!1.25e-31!71;UBERON:0001049!7.24e-31!52;UBERON:0005068!7.24e-31!52;UBERON:0006241!7.24e-31!52;UBERON:0007135!7.24e-31!52;UBERON:0000955!8.21e-29!50;UBERON:0006238!8.21e-29!50;UBERON:0002616!3.31e-28!49;UBERON:0000033!1.70e-27!63;UBERON:0003056!2.27e-23!49;UBERON:0003080!4.91e-23!40;UBERON:0002780!2.42e-22!39;UBERON:0001890!2.42e-22!39;UBERON:0006240!2.42e-22!39;UBERON:0002020!1.68e-21!34;UBERON:0002791!4.97e-18!29;UBERON:0003528!4.97e-18!29;UBERON:0001893!4.97e-18!29;UBERON:0007811!2.39e-13!86;UBERON:0000956!2.69e-13!21;UBERON:0001869!2.69e-13!21;UBERON:0000203!2.69e-13!21;UBERON:0000153!2.55e-12!94;UBERON:0002619!2.95e-11!17;UBERON:0002021!3.21e-08!10;UBERON:0000411!3.21e-08!10;UBERON:0001950!3.21e-08!10;UBERON:0003076!3.79e-08!12;UBERON:0003057!3.79e-08!12;UBERON:0000025!1.64e-07!114;UBERON:0004111!9.23e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.48e-52,54;UBERON:0001017,1.46e-51,73;UBERON:0001049,4.60e-50,52;UBERON:0005068,4.60e-50,52;UBERON:0006241,4.60e-50,52;UBERON:0007135,4.60e-50,52;UBERON:0001016,1.18e-49,75;UBERON:0002346,1.30e-43,64;UBERON:0003075,1.30e-43,64;UBERON:0007284,1.30e-43,64;UBERON:0000955,1.68e-43,47;UBERON:0006238,1.68e-43,47;UBERON:0002616,1.73e-42,46;UBERON:0004121,3.73e-40,95;UBERON:0000924,3.73e-40,95;UBERON:0006601,3.73e-40,95;UBERON:0010371,2.08e-37,73;UBERON:0003080,9.11e-37,40;UBERON:0002780,1.36e-35,39;UBERON:0001890,1.36e-35,39;UBERON:0006240,1.36e-35,39;UBERON:0002020,2.04e-35,34;UBERON:0003056,1.82e-33,49;UBERON:0003528,1.67e-29,29;UBERON:0002791,1.67e-29,29;UBERON:0001893,1.67e-29,29;UBERON:0010314,5.64e-26,92;UBERON:0000956,1.88e-21,21;UBERON:0001869,1.88e-21,21;UBERON:0000203,1.88e-21,21;UBERON:0002619,5.46e-18,17;UBERON:0000025,8.31e-14,114;UBERON:0002021,7.56e-13,10;UBERON:0000411,7.56e-13,10;UBERON:0001950,7.56e-13,10;UBERON:0003076,1.00e-12,12;UBERON:0003057,1.00e-12,12;UBERON:0004111,1.51e-12,122;UBERON:0002420,5.07e-09,8;UBERON:0007245,5.07e-09,8;UBERON:0010009,5.07e-09,8;UBERON:0010011,5.07e-09,8;UBERON:0000454,5.07e-09,8;UBERON:0002240,6.14e-08,6;UBERON:0005174,6.14e-08,6;UBERON:0001137,6.14e-08,6;UBERON:0011216,1.23e-07,194;UBERON:0001894,4.63e-07,10;UBERON:0006222,4.63e-07,10;UBERON:0001948,6.50e-07,5;UBERON:0002315,6.50e-07,5|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,2.34717403304412,1.09012578190223,1.31811709640683,1.36100929351998,0.55994568650145,0,0,0,0,0,0,0.515672092277442,4.85559506063035,3.1739458756322,2.53532561402472,1.0165335962074,0,0,0,0,0.898800331555214,1.15265491596466,1.97010263386108,2.29510095163874,2.3135745748652,3.14216082844184,3.53389665522582,3.1847607795888,1.0543001812006,1.83843757322004,2.20231761998777,2.93680877595932,3.22573719838111,6.72620067423989,6.58711033937349,5.73004707612436,2.23346399201105,2.8138130501584,3.66715794664344,8.54422897873636,6.54909731675874,5.40558392893372,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0.520455980298408,0.913396434936424,0.691846491768175,0.301445281105245,0.352766121407114,0.879666139307728,0,0.433798070759735,0,0.323533699894818,0,0,0,4.9772735491963,2.30391377494801,0,0,0,0,4.6435098215495,2.28750301409313,2.1361239859187,5.21472960576829,7.67146371990992,3.53239675751252,3.56930778749067,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.689706313300419,1.44049703844279,0.90422890701429,1.08858398642125,1.0249097622788,1.03071897015702,0.517406741478031,0.646703978798527,0.189106080167819,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0.329119699826961,0,0.162137619091711,0,0.658650345873152,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56177 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A3KGE4 | |||
|association_with_transcript=-70bp_to_ENSMUST00000113920,ENSMUST00000152415_5end | |||
|cluster_id=chr2:28048430..28048441,+ | |||
|description=CAGE_peak_10_at_Olfm1_5end | |||
|id=chr2:28048430..28048441,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.40e-15!43;CL:0000221!3.64e-15!44;CL:0000133!3.64e-15!44;CL:0000540!4.23e-14!33;CL:0000047!4.23e-14!33;CL:0000031!4.23e-14!33;CL:0000404!4.23e-14!33;CL:0000117!4.68e-14!23;CL:0000337!4.68e-14!23;CL:0000055!4.90e-12!50;CL:0000393!2.75e-11!39;CL:0000211!2.75e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.61e-23,23;CL:0000337,9.61e-23,23;CL:0000540,7.28e-19,33;CL:0000047,7.28e-19,33;CL:0000031,7.28e-19,33;CL:0000404,7.28e-19,33;CL:0002319,2.38e-18,43;CL:0000221,1.07e-17,44;CL:0000133,1.07e-17,44;CL:0000393,1.34e-14,39;CL:0000211,1.34e-14,39;CL:0002321,1.30e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.24e-35!73;UBERON:0005743!1.24e-35!73;UBERON:0000073!2.40e-35!75;UBERON:0001016!2.40e-35!75;UBERON:0004121!5.14e-32!102;UBERON:0000924!5.14e-32!102;UBERON:0006601!5.14e-32!102;UBERON:0002346!1.25e-31!71;UBERON:0003075!1.25e-31!71;UBERON:0007284!1.25e-31!71;UBERON:0001049!7.24e-31!52;UBERON:0005068!7.24e-31!52;UBERON:0006241!7.24e-31!52;UBERON:0007135!7.24e-31!52;UBERON:0000955!8.21e-29!50;UBERON:0006238!8.21e-29!50;UBERON:0002616!3.31e-28!49;UBERON:0000033!1.70e-27!63;UBERON:0003056!2.27e-23!49;UBERON:0003080!4.91e-23!40;UBERON:0002780!2.42e-22!39;UBERON:0001890!2.42e-22!39;UBERON:0006240!2.42e-22!39;UBERON:0002020!1.68e-21!34;UBERON:0002791!4.97e-18!29;UBERON:0003528!4.97e-18!29;UBERON:0001893!4.97e-18!29;UBERON:0007811!2.39e-13!86;UBERON:0000956!2.69e-13!21;UBERON:0001869!2.69e-13!21;UBERON:0000203!2.69e-13!21;UBERON:0000153!2.55e-12!94;UBERON:0002619!2.95e-11!17;UBERON:0002021!3.21e-08!10;UBERON:0000411!3.21e-08!10;UBERON:0001950!3.21e-08!10;UBERON:0003076!3.79e-08!12;UBERON:0003057!3.79e-08!12;UBERON:0000025!1.64e-07!114;UBERON:0004111!9.23e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.48e-52,54;UBERON:0001017,1.46e-51,73;UBERON:0001049,4.60e-50,52;UBERON:0005068,4.60e-50,52;UBERON:0006241,4.60e-50,52;UBERON:0007135,4.60e-50,52;UBERON:0001016,1.18e-49,75;UBERON:0002346,1.30e-43,64;UBERON:0003075,1.30e-43,64;UBERON:0007284,1.30e-43,64;UBERON:0000955,1.68e-43,47;UBERON:0006238,1.68e-43,47;UBERON:0002616,1.73e-42,46;UBERON:0004121,3.73e-40,95;UBERON:0000924,3.73e-40,95;UBERON:0006601,3.73e-40,95;UBERON:0010371,2.08e-37,73;UBERON:0003080,9.11e-37,40;UBERON:0002780,1.36e-35,39;UBERON:0001890,1.36e-35,39;UBERON:0006240,1.36e-35,39;UBERON:0002020,2.04e-35,34;UBERON:0003056,1.82e-33,49;UBERON:0003528,1.67e-29,29;UBERON:0002791,1.67e-29,29;UBERON:0001893,1.67e-29,29;UBERON:0010314,5.64e-26,92;UBERON:0000956,1.88e-21,21;UBERON:0001869,1.88e-21,21;UBERON:0000203,1.88e-21,21;UBERON:0002619,5.46e-18,17;UBERON:0000025,8.31e-14,114;UBERON:0002021,7.56e-13,10;UBERON:0000411,7.56e-13,10;UBERON:0001950,7.56e-13,10;UBERON:0003076,1.00e-12,12;UBERON:0003057,1.00e-12,12;UBERON:0004111,1.51e-12,122;UBERON:0002420,5.07e-09,8;UBERON:0007245,5.07e-09,8;UBERON:0010009,5.07e-09,8;UBERON:0010011,5.07e-09,8;UBERON:0000454,5.07e-09,8;UBERON:0002240,6.14e-08,6;UBERON:0005174,6.14e-08,6;UBERON:0001137,6.14e-08,6;UBERON:0011216,1.23e-07,194;UBERON:0001894,4.63e-07,10;UBERON:0006222,4.63e-07,10;UBERON:0001948,6.50e-07,5;UBERON:0002315,6.50e-07,5 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,2.34717403304412,1.09012578190223,1.31811709640683,1.36100929351998,0.55994568650145,0,0,0,0,0,0,0.515672092277442,4.85559506063035,3.1739458756322,2.53532561402472,1.0165335962074,0,0,0,0,0.898800331555214,1.15265491596466,1.97010263386108,2.29510095163874,2.3135745748652,3.14216082844184,3.53389665522582,3.1847607795888,1.0543001812006,1.83843757322004,2.20231761998777,2.93680877595932,3.22573719838111,6.72620067423989,6.58711033937349,5.73004707612436,2.23346399201105,2.8138130501584,3.66715794664344,8.54422897873636,6.54909731675874,5.40558392893372,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0.520455980298408,0.913396434936424,0.691846491768175,0.301445281105245,0.352766121407114,0.879666139307728,0,0.433798070759735,0,0.323533699894818,0,0,0,4.9772735491963,2.30391377494801,0,0,0,0,4.6435098215495,2.28750301409313,2.1361239859187,5.21472960576829,7.67146371990992,3.53239675751252,3.56930778749067,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.689706313300419,1.44049703844279,0.90422890701429,1.08858398642125,1.0249097622788,1.03071897015702,0.517406741478031,0.646703978798527,0.189106080167819,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0.329119699826961,0,0.162137619091711,0,0.658650345873152,0.134206418760372,4.41608891984667,4.93942139420565,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0.667134131534611,0.380451252225118,0,0,0,0.994782360205754,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.456994050438915,1.1270773567308,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0,0,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0,3.53211297973142,2.34423373184406,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,0,0.566153061577665,1.21443210502468,2.04579100537918,1.18586333383957,2.57057053137446,0.141940085208269,0.712262414669021,0,0.329940245945071,1.32745138339963,0.728341908464944,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,0,0,1.70219802876894,0.540183282093931,1.16422815404479,1.92903331528433,1.41872186913819,2.31879462882692,1.15184314421485,3.04464949114599,0,0,0,0.16488625294148,0.484393280087717,0.422190474497091,0.238744688006273,0,0,4.63563255026274,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.627264888043406,0.436725127492355,0.539457385539283,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0.149516546043979,0,0,0,0.675824501963113,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0.302899349844443,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0.335769232728157,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,7.34177395402186,7.36520378411483,8.02053718815155,6.70227411140382,2.74033007908257,6.7985450765073,3.37511250115903,6.30449684513909,7.25027854374727,6.21312374102184,0.415149390336707,0.798049746802062,0.512200817262403,0.972426868273176,1.04806581313991,1.83843508450014,1.11123363900808,0.824140228955577,1.28367683836726,0.505394423527595,2.02783439912192,0.754505365544305,1.12369808963859,1.02440243847791,0.746661096422973,1.90517476513229,0.579421629724277,0.964546102318525,0.412085900803307,1.61918812147837,1.02860775715625,0.532427418478012,0.476872379894642,0.290692833264657,0.752875043322645,0.930760686808441,0.548783918618318,0.526139422875686,1.35804113845862,1.12228454331548,1.42362021749009,0.689531376628944,0,0.619747364743864,0.771626443924566,3.2475375131933,1.16965804222704,1.28922632428979,0.57386499620653,0.441182838239031,0.463735671240843 | |||
|short_description=p10@Olfm1 | |||
}} |
Revision as of 22:35, 4 August 2015
Short description: | p10@Olfm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Olfm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -70bp_to_ENSMUST00000113920, ENSMUST00000152415_5end |
EntrezGene: | 56177 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.61e-23 | 23 |
neuroblast (sensu Vertebrata) | 9.61e-23 | 23 |
neuron | 7.28e-19 | 33 |
neuronal stem cell | 7.28e-19 | 33 |
neuroblast | 7.28e-19 | 33 |
electrically signaling cell | 7.28e-19 | 33 |
neural cell | 2.38e-18 | 43 |
ectodermal cell | 1.07e-17 | 44 |
neurectodermal cell | 1.07e-17 | 44 |
electrically responsive cell | 1.34e-14 | 39 |
electrically active cell | 1.34e-14 | 39 |
embryonic cell | 1.30e-07 | 70 |