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FFCP PHASE1:Mm9::chr2:32208771..32208802,-: Difference between revisions

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{{FFCP|EntrezGene=13429|HGNC=|MCL_coexpression_id=1|UniProt=E9QMG2,P39053,D6RH60|association_with_transcript=0bp_to_ENSMUST00000035664,ENSMUST00000113352,ENSMUST00000113354,ENSMUST00000113365,ENSMUST00000139238_5end|description=CAGE_peak_2_at_Dnm1_5end|id=chr2:32208771..32208802,-|ontology_enrichment_celltype=CL:0000117!2.14e-07!23;CL:0000337!2.14e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.74e-07,23;CL:0000337,1.74e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.11e-14!63;UBERON:0002346!8.80e-14!71;UBERON:0003075!8.80e-14!71;UBERON:0007284!8.80e-14!71;UBERON:0001049!3.72e-13!52;UBERON:0005068!3.72e-13!52;UBERON:0006241!3.72e-13!52;UBERON:0007135!3.72e-13!52;UBERON:0004121!1.49e-12!102;UBERON:0000924!1.49e-12!102;UBERON:0006601!1.49e-12!102;UBERON:0001017!1.99e-12!73;UBERON:0005743!1.99e-12!73;UBERON:0000955!2.21e-12!50;UBERON:0006238!2.21e-12!50;UBERON:0002616!7.38e-12!49;UBERON:0000073!1.27e-11!75;UBERON:0001016!1.27e-11!75;UBERON:0003056!4.61e-11!49;UBERON:0002020!3.07e-10!34;UBERON:0003080!5.01e-09!40;UBERON:0002780!1.67e-08!39;UBERON:0001890!1.67e-08!39;UBERON:0006240!1.67e-08!39;UBERON:0002791!7.44e-08!29;UBERON:0003528!7.44e-08!29;UBERON:0001893!7.44e-08!29;UBERON:0002021!2.78e-07!10;UBERON:0000411!2.78e-07!10;UBERON:0001950!2.78e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.27e-14,64;UBERON:0003075,1.27e-14,64;UBERON:0007284,1.27e-14,64;UBERON:0000073,2.21e-14,54;UBERON:0010371,3.49e-14,73;UBERON:0001049,3.61e-13,52;UBERON:0005068,3.61e-13,52;UBERON:0006241,3.61e-13,52;UBERON:0007135,3.61e-13,52;UBERON:0004121,1.77e-12,95;UBERON:0000924,1.77e-12,95;UBERON:0006601,1.77e-12,95;UBERON:0001017,3.48e-12,73;UBERON:0001016,3.19e-11,75;UBERON:0003056,5.70e-11,49;UBERON:0000955,1.21e-10,47;UBERON:0006238,1.21e-10,47;UBERON:0002616,3.86e-10,46;UBERON:0002020,4.18e-10,34;UBERON:0003080,6.54e-09,40;UBERON:0010314,9.83e-09,92;UBERON:0002780,2.19e-08,39;UBERON:0001890,2.19e-08,39;UBERON:0006240,2.19e-08,39;UBERON:0003528,1.05e-07,29;UBERON:0002791,1.05e-07,29;UBERON:0001893,1.05e-07,29;UBERON:0002021,2.27e-07,10;UBERON:0000411,2.27e-07,10;UBERON:0001950,2.27e-07,10|phase1_expression=9.12848428497326,11.8651638597383,20.0199665331396,13.6108895088074,14.0250804384977,7.89032577985882,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3896320959587,0.496454756004426,0.261199789138935,3.99981056983517,2.52350209173887,11.4846392823004,12.0613358924541,8.83432054012145,1.90023419456374,3.52842181663903,2.66076612786366,0.635030673459631,0.61506478758457,0,3.17736781726402,2.49351968037739,2.85837098767317,0,0,0,0,0,0,3.65100772129174,6.58950052926845,2.38610777810186,2.34717403304412,0,0.439372365468944,0.388859798148567,1.67983705950435,0,0,0,0,0.514518872071894,0.85960031981627,0,22.8617600771345,26.9785399428737,27.2547503507657,1.0165335962074,1.77858959222228,0.449949858640699,0,1.4209602298922,1.19840044207362,0.768436610643109,2.59224030771194,2.29510095163874,1.68259969081106,100.549146510139,69.131853317855,3.67472397644862,3.35459148563827,2.75765635983006,156.364551019132,236.604637471853,228.56652148529,21.101806036831,22.6889356133976,15.106487746146,249.589601107235,145.755515998205,201.235292322059,57.7472027528389,67.768920060373,33.9246991402047,0.832988126665025,1.51143120213571,0,0,0,0,0,0,10.6737759300131,6.81721290312231,4.41636207824877,2.82671659608272,5.7745802108439,2.56652954828636,0,0,0,0,0,5.48082622651488,1.29468941823586,5.93768556259299,3.81667718885499,3.65358573974569,3.22861696158482,3.16517545160507,5.76184664964954,3.14166478324189,2.71914464507811,1.73519228303894,1.76922110389975,15.6913844448987,5.07935492458905,8.727754556434,0,205.532119502106,287.570328454874,5.62005521458901,0,0,0,188.286833731862,101.565133825735,17.3403005915753,193.640292694196,208.66381318155,174.334169385471,152.831269809828,12.220723662038,3.6078021476927,0.505445516867349,19.5710925974421,9.10843100738926,8.04657365517155,7.20248519221397,9.79581315932148,9.59314638033723,10.6334387836425,10.8694000489285,41.1338359475035,13.3652155618362,18.9106080167819,20.0584281546902,11.6173738186615,18.6291656981151,22.2881386574187,26.7516777330327,7.76233640592123,0,0,0,1.03562886267751,1.17263029990548,2.34080679899319,2.84093682702252,1.96764231747404,1.54267112887378,1.86027155800326,1.3413670069981,1.86824547787471,3.62031669809657,2.13417703302824,4.05344047729279,3.36259971078264,1.75640092232841,1.61047702512446,185.47573463356,6.68879980465349,5.94753809370836,6.87571473325215,3.83918850963421,4.18026009348789,8.50525244725816,12.5043785266472,11.3412802360884,12.3646656973163,7.59246498471219,9.0584425098206,11.5614196048124,14.9217354030863,11.5028811400281,9.88701349519644,4.53889904736858,3.38540164532424,3.22435431620239,2.85621281524322,0,1.83286195060783,1.55161989734101,2.66516115583211,1.01178459398812,0.442830443938806,0.31399745568275,0.740382983530803,0.592905254174298,1.66845105716094,0.982794975566015,0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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:13429
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:E9QMG2,uniprot:P39053,uniprot:D6RH60
|association_with_transcript=0bp_to_ENSMUST00000035664,ENSMUST00000113352,ENSMUST00000113354,ENSMUST00000113365,ENSMUST00000139238_5end
|cluster_id=chr2:32208771..32208802,-
|description=CAGE_peak_2_at_Dnm1_5end
|id=chr2:32208771..32208802,-
|ontology_enrichment_celltype=CL:0000117!2.14e-07!23;CL:0000337!2.14e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.74e-07,23;CL:0000337,1.74e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.11e-14!63;UBERON:0002346!8.80e-14!71;UBERON:0003075!8.80e-14!71;UBERON:0007284!8.80e-14!71;UBERON:0001049!3.72e-13!52;UBERON:0005068!3.72e-13!52;UBERON:0006241!3.72e-13!52;UBERON:0007135!3.72e-13!52;UBERON:0004121!1.49e-12!102;UBERON:0000924!1.49e-12!102;UBERON:0006601!1.49e-12!102;UBERON:0001017!1.99e-12!73;UBERON:0005743!1.99e-12!73;UBERON:0000955!2.21e-12!50;UBERON:0006238!2.21e-12!50;UBERON:0002616!7.38e-12!49;UBERON:0000073!1.27e-11!75;UBERON:0001016!1.27e-11!75;UBERON:0003056!4.61e-11!49;UBERON:0002020!3.07e-10!34;UBERON:0003080!5.01e-09!40;UBERON:0002780!1.67e-08!39;UBERON:0001890!1.67e-08!39;UBERON:0006240!1.67e-08!39;UBERON:0002791!7.44e-08!29;UBERON:0003528!7.44e-08!29;UBERON:0001893!7.44e-08!29;UBERON:0002021!2.78e-07!10;UBERON:0000411!2.78e-07!10;UBERON:0001950!2.78e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.27e-14,64;UBERON:0003075,1.27e-14,64;UBERON:0007284,1.27e-14,64;UBERON:0000073,2.21e-14,54;UBERON:0010371,3.49e-14,73;UBERON:0001049,3.61e-13,52;UBERON:0005068,3.61e-13,52;UBERON:0006241,3.61e-13,52;UBERON:0007135,3.61e-13,52;UBERON:0004121,1.77e-12,95;UBERON:0000924,1.77e-12,95;UBERON:0006601,1.77e-12,95;UBERON:0001017,3.48e-12,73;UBERON:0001016,3.19e-11,75;UBERON:0003056,5.70e-11,49;UBERON:0000955,1.21e-10,47;UBERON:0006238,1.21e-10,47;UBERON:0002616,3.86e-10,46;UBERON:0002020,4.18e-10,34;UBERON:0003080,6.54e-09,40;UBERON:0010314,9.83e-09,92;UBERON:0002780,2.19e-08,39;UBERON:0001890,2.19e-08,39;UBERON:0006240,2.19e-08,39;UBERON:0003528,1.05e-07,29;UBERON:0002791,1.05e-07,29;UBERON:0001893,1.05e-07,29;UBERON:0002021,2.27e-07,10;UBERON:0000411,2.27e-07,10;UBERON:0001950,2.27e-07,10
|phase1_expression=9.12848428497326,11.8651638597383,20.0199665331396,13.6108895088074,14.0250804384977,7.89032577985882,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3896320959587,0.496454756004426,0.261199789138935,3.99981056983517,2.52350209173887,11.4846392823004,12.0613358924541,8.83432054012145,1.90023419456374,3.52842181663903,2.66076612786366,0.635030673459631,0.61506478758457,0,3.17736781726402,2.49351968037739,2.85837098767317,0,0,0,0,0,0,3.65100772129174,6.58950052926845,2.38610777810186,2.34717403304412,0,0.439372365468944,0.388859798148567,1.67983705950435,0,0,0,0,0.514518872071894,0.85960031981627,0,22.8617600771345,26.9785399428737,27.2547503507657,1.0165335962074,1.77858959222228,0.449949858640699,0,1.4209602298922,1.19840044207362,0.768436610643109,2.59224030771194,2.29510095163874,1.68259969081106,100.549146510139,69.131853317855,3.67472397644862,3.35459148563827,2.75765635983006,156.364551019132,236.604637471853,228.56652148529,21.101806036831,22.6889356133976,15.106487746146,249.589601107235,145.755515998205,201.235292322059,57.7472027528389,67.768920060373,33.9246991402047,0.832988126665025,1.51143120213571,0,0,0,0,0,0,10.6737759300131,6.81721290312231,4.41636207824877,2.82671659608272,5.7745802108439,2.56652954828636,0,0,0,0,0,5.48082622651488,1.29468941823586,5.93768556259299,3.81667718885499,3.65358573974569,3.22861696158482,3.16517545160507,5.76184664964954,3.14166478324189,2.71914464507811,1.73519228303894,1.76922110389975,15.6913844448987,5.07935492458905,8.727754556434,0,205.532119502106,287.570328454874,5.62005521458901,0,0,0,188.286833731862,101.565133825735,17.3403005915753,193.640292694196,208.66381318155,174.334169385471,152.831269809828,12.220723662038,3.6078021476927,0.505445516867349,19.5710925974421,9.10843100738926,8.04657365517155,7.20248519221397,9.79581315932148,9.59314638033723,10.6334387836425,10.8694000489285,41.1338359475035,13.3652155618362,18.9106080167819,20.0584281546902,11.6173738186615,18.6291656981151,22.2881386574187,26.7516777330327,7.76233640592123,0,0,0,1.03562886267751,1.17263029990548,2.34080679899319,2.84093682702252,1.96764231747404,1.54267112887378,1.86027155800326,1.3413670069981,1.86824547787471,3.62031669809657,2.13417703302824,4.05344047729279,3.36259971078264,1.75640092232841,1.61047702512446,185.47573463356,6.68879980465349,5.94753809370836,6.87571473325215,3.83918850963421,4.18026009348789,8.50525244725816,12.5043785266472,11.3412802360884,12.3646656973163,7.59246498471219,9.0584425098206,11.5614196048124,14.9217354030863,11.5028811400281,9.88701349519644,4.53889904736858,3.38540164532424,3.22435431620239,2.85621281524322,0,1.83286195060783,1.55161989734101,2.66516115583211,1.01178459398812,0.442830443938806,0.31399745568275,0.740382983530803,0.592905254174298,1.66845105716094,0.982794975566015,0.224862112384854,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0.358794827043824,0.482443521363367,2.77129785249907,5.49525094134406,5.70377417547091,2.8856664581782,3.28566347603903,2.51259386162724,1.90434912708811,3.31727201358258,2.83743259391144,3.76489972402917,3.98636921643718,4.91589944147214,3.45369963731791,1.59113964439663,1.50791283939272,0,0.491764273019036,1.65562047782839,227.821287192677,224.929226570438,13.6066004662641,6.81671503451807,1.57754109708128,1.95219372148319,7.10897212518236,1.43381278771531,0.891194696329576,1.69845918473299,2.83367491172426,4.38383786866968,5.13874111330481,144.915913706235,3.97432238583152,12.6426578603751,11.8907480328111,10.0631775013247,2.65490276679926,1.94224508923985,4.83717691143602,1.32023555829129,3.54362271456927,2.76691633149535,6.46070732920553,3.99887102425256,4.9909632973861,3.16036757935816,2.10837217149998,3.09406629744561,3.40439605753788,5.58189391497062,3.62204314591713,4.92975180572662,3.90148514013002,5.88617098086833,7.40470592709544,9.43841342255258,0,1.0591603543191,2.8668691747145,4.28704257647848,11.948367575497,8.38349656501366,6.32673423216623,5.74493149107714,10.2018292820448,208.974315365844,0.341741761595705,6.3979929068599,2.77791791054568,0.376736914009382,0.410082683163076,0.686334519619568,0,0,0,1.90934123603023,6.95939185878498,7.1161813494397,5.18425635944646,6.690825472463,2.40198820120795,4.18079473792944,7.68677138245624,2.87931536182433,3.36998930558661,0,2.25477175473676,2.54178128274764,4.13646226142744,5.05573089694524,4.39143399824286,4.22390313726945,4.22486059124714,2.99470085141085,1.15345278868282,1.69108884578204,4.03242008761012,0,1.62180172232131,0.821687657318618,0.389762468933385,0.716106782669926,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,5.21479882314986,0.221985953374065,0.179427713218951,0.335769232728157,7.72758376128762,3.75364950902364,9.70703608616505,6.43105137237198,3.00943262421218,142.317464339501,142.240498080718,144.369669386728,127.68691448136,164.419804744954,177.51756588658,181.581052562356,187.7839417445,203.460941633908,205.550843765473,5.91587881229807,10.7736715818278,10.0732827394939,7.05009479498053,10.2710449687711,9.55986243940074,11.7790765734856,9.88968274746692,17.9714757371417,10.1078884705519,7.35089969681695,10.7517014590063,11.9861129561449,12.1647789569252,11.8891420738119,16.6702791949076,14.0220034393275,15.8185560780238,11.1263193216893,12.217510371155,6.17164654293748,6.92155644021416,9.77588378784016,9.30217066446903,11.1990162694243,10.2383675548929,13.5366699925852,7.89209134313529,13.0371949292027,4.48913817326191,11.2703267217965,11.3280154731898,9.41231399290286,14.5640630714808,9.25951732709479,20.9840885467875,13.5680332898337,15.6855869455258,17.2159498861959,15.2208079192466,11.1296561097802
|short_description=p2@Dnm1
}}

Revision as of 01:17, 5 August 2015

Short description:p2@Dnm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dnm1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000035664, ENSMUST00000113352, ENSMUST00000113354, ENSMUST00000113365, ENSMUST00000139238_5end
EntrezGene:13429
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dnm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A348.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I28.83
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C322.86
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1100.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D569.13
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3156.36
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3236.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7228.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4249.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5145.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6201.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D657.75
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F667.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.92
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F515.69
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2205.53
cerebellum, neonate N30.CNhs11135.1395-42I2287.57
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4188.29
corpus striatum, adult.CNhs10487.19-21D8101.57
corpus striatum, neonate N00.CNhs11226.630-43F117.34
cortex, adult.CNhs10473.12-14D5193.64
cortex, neonate N30.CNhs11107.1392-42F2208.66
diencephalon, adult.CNhs10482.20-12F2174.33
diencephalon, neonate N30.CNhs11201.1388-42B2152.83
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G419.57
eyeball, embryo E12.CNhs11016.345-16C69.11
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D49.80
eyeball, neonate N00.CNhs11207.633-15C69.59
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G810.87
eyeball, neonate N16.CNhs11188.777-19A241.13
forelimb, embryo E11.CNhs10596.335-25E213.37
forelimb, embryo E12.CNhs10600.359-14H218.91
forelimb, embryo E13.CNhs10589.384-1E220.06
forelimb, embryo E14.CNhs10577.413-26A811.62
forelimb, embryo E15.CNhs11007.437-20E718.63
forelimb, embryo E17.CNhs10598.1517-43C422.29
forelimb, embryo E18.CNhs11008.1520-43B526.75
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G14.05
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E8185.48
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D88.51
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F712.36
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E99.06
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F214.92
intestine, neonate N10.CNhs11098.755-23A511.50
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C2227.82
medulla oblongata, neonate N30.CNhs11200.1396-42A3224.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I9144.92
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I411.89
oviduct, adult pregnant day01.CNhs10500.988-6G610.06
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G411.95
skin, neonate N03.CNhs11215.662-22H38.38
skin, neonate N06.CNhs11097.693-20I56.33
skin, neonate N10.CNhs11108.762-6C45.74
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C9208.97
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G87.12
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A97.69
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E59.71
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1142.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2142.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3144.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7127.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4164.42
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5177.52
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6181.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7187.78
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8203.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9205.55
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.56
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I520.98
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C215.69
whole body, neonate N01.CNhs10576.659-23C617.22
whole body, neonate N06.CNhs10515.692-21D115.22
whole body, neonate N10.CNhs10518.761-6B411.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.74e-0723
neuroblast (sensu Vertebrata)1.74e-0723

Uber anatomy
Ontology termp-valuen
neurectoderm1.27e-1464
neural plate1.27e-1464
presumptive neural plate1.27e-1464
regional part of nervous system2.21e-1454
ecto-epithelium3.49e-1473
neural tube3.61e-1352
neural rod3.61e-1352
future spinal cord3.61e-1352
neural keel3.61e-1352
ectoderm-derived structure1.77e-1295
ectoderm1.77e-1295
presumptive ectoderm1.77e-1295
central nervous system3.48e-1273
nervous system3.19e-1175
pre-chordal neural plate5.70e-1149
brain1.21e-1047
future brain1.21e-1047
regional part of brain3.86e-1046
gray matter4.18e-1034
anterior neural tube6.54e-0940
structure with developmental contribution from neural crest9.83e-0992
regional part of forebrain2.19e-0839
forebrain2.19e-0839
future forebrain2.19e-0839
brain grey matter1.05e-0729
regional part of telencephalon1.05e-0729
telencephalon1.05e-0729
occipital lobe2.27e-0710
visual cortex2.27e-0710
neocortex2.27e-0710
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