FFCP PHASE1:Mm9::chr2:91023025..91023090,-: Difference between revisions
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{{FFCP|EntrezGene=228355|HGNC=|MCL_coexpression_id=1|UniProt=A2AGR0,A2AGQ6|association_with_transcript=0bp_to_ENSMUST00000099723,ENSMUST00000111376_5end|description=CAGE_peak_1_at_Madd_5end|id=chr2:91023025..91023090,-|ontology_enrichment_celltype=CL:0000540!1.50e-13!33;CL:0000047!1.50e-13!33;CL:0000031!1.50e-13!33;CL:0000404!1.50e-13!33;CL:0000117!1.53e-12!23;CL:0000337!1.53e-12!23;CL:0000393!1.72e-07!39;CL:0000211!1.72e-07!39;CL:0000221!5.05e-07!44;CL:0000133!5.05e-07!44;CL:0002319!6.98e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.49e-13,33;CL:0000047,1.49e-13,33;CL:0000031,1.49e-13,33;CL:0000404,1.49e-13,33;CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0000393,1.77e-07,39;CL:0000211,1.77e-07,39;CL:0000221,5.23e-07,44;CL:0000133,5.23e-07,44;CL:0002319,7.23e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!6.22e-28!86;UBERON:0000153!6.93e-26!94;UBERON:0001017!1.32e-24!73;UBERON:0005743!1.32e-24!73;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0004121!8.14e-23!102;UBERON:0000924!8.14e-23!102;UBERON:0006601!8.14e-23!102;UBERON:0000073!1.05e-22!75;UBERON:0001016!1.05e-22!75;UBERON:0000033!1.44e-22!63;UBERON:0001049!2.51e-21!52;UBERON:0005068!2.51e-21!52;UBERON:0006241!2.51e-21!52;UBERON:0007135!2.51e-21!52;UBERON:0000955!6.94e-21!50;UBERON:0006238!6.94e-21!50;UBERON:0003056!2.46e-20!49;UBERON:0002616!3.05e-20!49;UBERON:0003080!9.83e-18!40;UBERON:0002780!3.59e-17!39;UBERON:0001890!3.59e-17!39;UBERON:0006240!3.59e-17!39;UBERON:0002020!4.44e-16!34;UBERON:0002791!1.01e-13!29;UBERON:0003528!1.01e-13!29;UBERON:0001893!1.01e-13!29;UBERON:0000956!2.19e-09!21;UBERON:0001869!2.19e-09!21;UBERON:0000203!2.19e-09!21;UBERON:0002021!4.01e-08!10;UBERON:0000411!4.01e-08!10;UBERON:0001950!4.01e-08!10;UBERON:0002619!1.20e-07!17;UBERON:0000064!6.79e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-24,64;UBERON:0003075,1.04e-24,64;UBERON:0007284,1.04e-24,64;UBERON:0001017,1.40e-24,73;UBERON:0004121,2.95e-23,95;UBERON:0000924,2.95e-23,95;UBERON:0006601,2.95e-23,95;UBERON:0010371,3.62e-23,73;UBERON:0000073,8.78e-23,54;UBERON:0001016,1.10e-22,75;UBERON:0001049,2.66e-21,52;UBERON:0005068,2.66e-21,52;UBERON:0006241,2.66e-21,52;UBERON:0007135,2.66e-21,52;UBERON:0003056,2.45e-20,49;UBERON:0000955,6.48e-19,47;UBERON:0006238,6.48e-19,47;UBERON:0002616,2.75e-18,46;UBERON:0003080,9.80e-18,40;UBERON:0002780,3.58e-17,39;UBERON:0001890,3.58e-17,39;UBERON:0006240,3.58e-17,39;UBERON:0002020,4.43e-16,34;UBERON:0003528,1.01e-13,29;UBERON:0002791,1.01e-13,29;UBERON:0001893,1.01e-13,29;UBERON:0010314,1.78e-11,92;UBERON:0000956,2.18e-09,21;UBERON:0001869,2.18e-09,21;UBERON:0000203,2.18e-09,21;UBERON:0002021,4.01e-08,10;UBERON:0000411,4.01e-08,10;UBERON:0001950,4.01e-08,10;UBERON:0002619,1.20e-07,17;UBERON:0007811,5.99e-07,36|phase1_expression=13.6126520039075,2.79180326111489,1.81999695755814,1.81478526784098,1.50268718983904,5.20425742926858,4.20502753071946,15.236552166106,48.0089542537184,41.1953566326709,12.4989116804619,9.97151987441705,16.2640693434645,17.3092396789615,4.33042690360362,3.84703008040669,2.79824751251259,7.25562980323947,6.7186072466812,10.1853516431527,21.7710822786739,6.55320277925843,4.96279599363977,3.67982572424835,4.12936705920906,2.29692785646008,0.430761996159075,1.50829862880122,1.33016393619462,2.26827116783938,3.99114919179548,3.17515336729816,1.23012957516914,0,2.59966457776147,2.49351968037739,1.22501613757421,1.67412652294763,3.1253413780952,4.71171369576418,3.52938892818609,5.46436387966757,5.34061388334269,0.125896817975577,0.608261587317087,0.367093504323363,0.782391344348039,4.36050312760893,2.19686182734472,1.74986909166855,2.79972843250725,1.43752564364972,10.2347389695219,38.4441935266013,44.0282876876628,0.771778308107841,0.85960031981627,0.515672092277442,49.1628999888823,56.0730438028355,61.4816461400994,0.677689064138264,1.77858959222228,4.94944844504769,6.92206453796882,8.5257613793532,3.89480143673926,4.2264013585371,26.4408511386618,34.021496459586,28.1835448210852,41.1337417541477,38.4311261255808,32.092589394318,29.7120960156533,40.4456266108409,68.271846219621,70.8664726372792,68.6621203655408,58.5575117522061,49.9522534069157,50.5285969440057,64.2120897703176,61.9038871034848,65.7032465440283,42.4265163082082,38.4403538157578,41.9398753106926,1.36307147999731,2.49386148352392,6.08715426273523,2.58127163094416,1.3599426674155,0,1.29955283489534,0.896053774194671,5.33688796500657,1.53387290320252,1.29893002301434,1.06001872353102,8.73229202615419,2.56652954828636,7.64415719119937,14.2213340630666,2.59789249213457,1.01343946190039,2.52762222507392,4.11061966988616,15.018397251536,9.50029690014878,6.07198643681475,5.1759131313064,6.22661842591358,4.06951129492081,5.76184664964954,4.77533047052767,5.93267922562497,2.16899035379867,4.42305275974937,2.42650274921114,4.19598885074748,3.87900202508178,5.59175283654366,66.7540217186328,83.778682725382,2.81002760729451,7.54835284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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:228355 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AGR0,uniprot:A2AGQ6 | |||
|association_with_transcript=0bp_to_ENSMUST00000099723,ENSMUST00000111376_5end | |||
|cluster_id=chr2:91023025..91023090,- | |||
|description=CAGE_peak_1_at_Madd_5end | |||
|id=chr2:91023025..91023090,- | |||
|ontology_enrichment_celltype=CL:0000540!1.50e-13!33;CL:0000047!1.50e-13!33;CL:0000031!1.50e-13!33;CL:0000404!1.50e-13!33;CL:0000117!1.53e-12!23;CL:0000337!1.53e-12!23;CL:0000393!1.72e-07!39;CL:0000211!1.72e-07!39;CL:0000221!5.05e-07!44;CL:0000133!5.05e-07!44;CL:0002319!6.98e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.49e-13,33;CL:0000047,1.49e-13,33;CL:0000031,1.49e-13,33;CL:0000404,1.49e-13,33;CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0000393,1.77e-07,39;CL:0000211,1.77e-07,39;CL:0000221,5.23e-07,44;CL:0000133,5.23e-07,44;CL:0002319,7.23e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!6.22e-28!86;UBERON:0000153!6.93e-26!94;UBERON:0001017!1.32e-24!73;UBERON:0005743!1.32e-24!73;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0004121!8.14e-23!102;UBERON:0000924!8.14e-23!102;UBERON:0006601!8.14e-23!102;UBERON:0000073!1.05e-22!75;UBERON:0001016!1.05e-22!75;UBERON:0000033!1.44e-22!63;UBERON:0001049!2.51e-21!52;UBERON:0005068!2.51e-21!52;UBERON:0006241!2.51e-21!52;UBERON:0007135!2.51e-21!52;UBERON:0000955!6.94e-21!50;UBERON:0006238!6.94e-21!50;UBERON:0003056!2.46e-20!49;UBERON:0002616!3.05e-20!49;UBERON:0003080!9.83e-18!40;UBERON:0002780!3.59e-17!39;UBERON:0001890!3.59e-17!39;UBERON:0006240!3.59e-17!39;UBERON:0002020!4.44e-16!34;UBERON:0002791!1.01e-13!29;UBERON:0003528!1.01e-13!29;UBERON:0001893!1.01e-13!29;UBERON:0000956!2.19e-09!21;UBERON:0001869!2.19e-09!21;UBERON:0000203!2.19e-09!21;UBERON:0002021!4.01e-08!10;UBERON:0000411!4.01e-08!10;UBERON:0001950!4.01e-08!10;UBERON:0002619!1.20e-07!17;UBERON:0000064!6.79e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-24,64;UBERON:0003075,1.04e-24,64;UBERON:0007284,1.04e-24,64;UBERON:0001017,1.40e-24,73;UBERON:0004121,2.95e-23,95;UBERON:0000924,2.95e-23,95;UBERON:0006601,2.95e-23,95;UBERON:0010371,3.62e-23,73;UBERON:0000073,8.78e-23,54;UBERON:0001016,1.10e-22,75;UBERON:0001049,2.66e-21,52;UBERON:0005068,2.66e-21,52;UBERON:0006241,2.66e-21,52;UBERON:0007135,2.66e-21,52;UBERON:0003056,2.45e-20,49;UBERON:0000955,6.48e-19,47;UBERON:0006238,6.48e-19,47;UBERON:0002616,2.75e-18,46;UBERON:0003080,9.80e-18,40;UBERON:0002780,3.58e-17,39;UBERON:0001890,3.58e-17,39;UBERON:0006240,3.58e-17,39;UBERON:0002020,4.43e-16,34;UBERON:0003528,1.01e-13,29;UBERON:0002791,1.01e-13,29;UBERON:0001893,1.01e-13,29;UBERON:0010314,1.78e-11,92;UBERON:0000956,2.18e-09,21;UBERON:0001869,2.18e-09,21;UBERON:0000203,2.18e-09,21;UBERON:0002021,4.01e-08,10;UBERON:0000411,4.01e-08,10;UBERON:0001950,4.01e-08,10;UBERON:0002619,1.20e-07,17;UBERON:0007811,5.99e-07,36 | |||
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| |||
|short_description=p1@Madd | |||
}} |
Revision as of 15:22, 5 August 2015
Short description: | p1@Madd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Madd_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000099723, ENSMUST00000111376_5end |
EntrezGene: | 228355 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.49e-13 | 33 |
neuronal stem cell | 1.49e-13 | 33 |
neuroblast | 1.49e-13 | 33 |
electrically signaling cell | 1.49e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.52e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-12 | 23 |
electrically responsive cell | 1.77e-07 | 39 |
electrically active cell | 1.77e-07 | 39 |
ectodermal cell | 5.23e-07 | 44 |
neurectodermal cell | 5.23e-07 | 44 |
neural cell | 7.23e-07 | 43 |